Project measure / variable:   Harrill2   LW_trt

ID, description, units MPD:44162   LW_trt   liver weight at sacrifice   [g]  DB289  
DB289 study
Data set, strains Harrill2   inbred   34 strains     sex: f     age: 6-8wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Harrill2 - liver weight at sacrifice DB289



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.598   g
Median of the strain means0.575   g
SD of the strain means± 0.148
Coefficient of variation (CV)0.248
Min–max range of strain means0.294   –   1.02   g
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 3.6175 0.1096 23.1637 < 0.0001
Residuals 134 0.6342 0.0047


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.47 0.0265   5 0.0118 0.0563 0.44, 0.51 -0.86
A/J f 0.514 0.0336   5 0.015 0.0654 0.47, 0.56 -0.57
AKR/J f 0.612 0.037   5 0.0166 0.0605 0.57, 0.66 0.09
BALB/cByJ f 0.584 0.0451   5 0.0201 0.0771 0.53, 0.64 -0.09
BTBR T+ Itpr3tf/J f 0.812 0.0847   5 0.0379 0.104 0.73, 0.92 1.44
BUB/BnJ f 0.74 0.0464   5 0.0207 0.0627 0.66, 0.78 0.96
C3H/HeJ f 0.634 0.074   5 0.0331 0.117 0.56, 0.74 0.24
C57BL/6J f 0.54 0.104   5 0.0465 0.192 0.36, 0.61 -0.39
C57BLKS/J f 0.598 0.0676   5 0.0302 0.113 0.53, 0.68 0.0
C57BR/cdJ f 0.557 0.0714   4 0.0357 0.128 0.46, 0.63 -0.28
C58/J f 0.538 0.0507   5 0.0227 0.0942 0.47, 0.6 -0.4
CBA/J f 0.578 0.0661   5 0.0296 0.114 0.49, 0.67 -0.14
CE/J f 0.478 0.0476   5 0.0213 0.0997 0.43, 0.55 -0.81
DBA/2J f 0.63 0.0316   5 0.0141 0.0502 0.59, 0.67 0.22
FVB/NJ f 0.766 0.0733   5 0.0328 0.0958 0.67, 0.86 1.13
I/LnJ f 0.542 0.0409   5 0.0183 0.0754 0.51, 0.6 -0.38
KK/HlJ f 0.774 0.0956   5 0.0427 0.123 0.64, 0.87 1.19
LG/J f 0.844 0.0607   5 0.0271 0.0719 0.8, 0.95 1.66
LP/J f 0.378 0.039   5 0.0174 0.103 0.33, 0.43 -1.48
MA/MyJ f 0.676 0.101   5 0.0452 0.15 0.58, 0.79 0.53
MRL/MpJ f 1.02 0.153   5 0.0684 0.15 0.78, 1.2 2.85
NOD/ShiLtJ f 0.486 0.0472   5 0.0211 0.0972 0.43, 0.53 -0.76
NON/ShiLtJ f 0.688 0.0536   5 0.024 0.0779 0.65, 0.78 0.61
NOR/LtJ f 0.572 0.0438   5 0.0196 0.0766 0.5, 0.62 -0.18
NZW/LacJ f 0.768 0.0581   5 0.026 0.0756 0.71, 0.85 1.15
P/J f 0.504 0.101   5 0.0451 0.2 0.37, 0.63 -0.63
PL/J f 0.392 0.0239   5 0.0107 0.0609 0.35, 0.41 -1.39
PWK/PhJ f 0.518 0.101   5 0.045 0.194 0.43, 0.67 -0.54
RIIIS/J f 0.56 0.0557   5 0.0249 0.0994 0.49, 0.64 -0.26
SEA/GnJ f 0.648 0.0884   5 0.0395 0.136 0.55, 0.79 0.34
SJL/J f 0.7 0.0689   5 0.0308 0.0985 0.58, 0.75 0.69
SM/J f 0.44 0.0543   5 0.0243 0.123 0.36, 0.51 -1.07
SWR/J f 0.478 0.0263   4 0.0131 0.0551 0.45, 0.5 -0.81
WSB/EiJ f 0.294 0.0611   5 0.0273 0.208 0.25, 0.39 -2.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.47 0.0308 0.5308 0.4092
A/J f 0.514 0.0308 0.5748 0.4532
AKR/J f 0.612 0.0308 0.6728 0.5512
BALB/cByJ f 0.584 0.0308 0.6448 0.5232
BTBR T+ Itpr3tf/J f 0.812 0.0308 0.8728 0.7512
BUB/BnJ f 0.74 0.0308 0.8008 0.6792
C3H/HeJ f 0.634 0.0308 0.6948 0.5732
C57BL/6J f 0.54 0.0308 0.6008 0.4792
C57BLKS/J f 0.598 0.0308 0.6588 0.5372
C57BR/cdJ f 0.5575 0.0344 0.6255 0.4895
C58/J f 0.538 0.0308 0.5988 0.4772
CBA/J f 0.578 0.0308 0.6388 0.5172
CE/J f 0.478 0.0308 0.5388 0.4172
DBA/2J f 0.63 0.0308 0.6908 0.5692
FVB/NJ f 0.766 0.0308 0.8268 0.7052
I/LnJ f 0.542 0.0308 0.6028 0.4812
KK/HlJ f 0.774 0.0308 0.8348 0.7132
LG/J f 0.844 0.0308 0.9048 0.7832
LP/J f 0.378 0.0308 0.4388 0.3172
MA/MyJ f 0.676 0.0308 0.7368 0.6152
MRL/MpJ f 1.022 0.0308 1.0828 0.9612
NOD/ShiLtJ f 0.486 0.0308 0.5468 0.4252
NON/ShiLtJ f 0.688 0.0308 0.7488 0.6272
NOR/LtJ f 0.572 0.0308 0.6328 0.5112
NZW/LacJ f 0.768 0.0308 0.8288 0.7072
P/J f 0.504 0.0308 0.5648 0.4432
PL/J f 0.392 0.0308 0.4528 0.3312
PWK/PhJ f 0.518 0.0308 0.5788 0.4572
RIIIS/J f 0.56 0.0308 0.6208 0.4992
SEA/GnJ f 0.648 0.0308 0.7088 0.5872
SJL/J f 0.7 0.0308 0.7608 0.6392
SM/J f 0.44 0.0308 0.5008 0.3792
SWR/J f 0.4775 0.0344 0.5455 0.4095
WSB/EiJ f 0.294 0.0308 0.3548 0.2332




  GWAS USING LINEAR MIXED MODELS