Project measure / variable:   Harrill2   LW_ctrl

ID, description, units MPD:44161   LW_ctrl   liver weight at sacrifice   [g]  control  
DB289 study
Data set, strains Harrill2   inbred   34 strains     sex: f     age: 6-8wks
Procedure organ weights
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Harrill2 - liver weight at sacrifice control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested34 strains
Mean of the strain means0.763   g
Median of the strain means0.739   g
SD of the strain means± 0.184
Coefficient of variation (CV)0.242
Min–max range of strain means0.435   –   1.34   g
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 33 5.4775 0.166 40.3094 < 0.0001
Residuals 135 0.5559 0.0041


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.596 0.0336   5 0.015 0.0564 0.56, 0.65 -0.91
A/J f 0.686 0.0764   5 0.0341 0.111 0.6, 0.76 -0.42
AKR/J f 0.882 0.0606   5 0.0271 0.0687 0.79, 0.95 0.65
BALB/cByJ f 0.728 0.0179   5 0.008 0.0246 0.71, 0.75 -0.19
BTBR T+ Itpr3tf/J f 1.07 0.0713   5 0.0319 0.0669 1.01, 1.19 1.66
BUB/BnJ f 0.94 0.0906   5 0.0405 0.0963 0.83, 1.05 0.96
C3H/HeJ f 0.776 0.0754   5 0.0337 0.0971 0.7, 0.89 0.07
C57BL/6J f 0.764 0.0522   5 0.0234 0.0684 0.68, 0.82 0.01
C57BLKS/J f 0.846 0.0336   5 0.015 0.0397 0.81, 0.9 0.45
C57BR/cdJ f 0.724 0.0961   5 0.043 0.133 0.62, 0.81 -0.21
C58/J f 0.672 0.0789   5 0.0353 0.117 0.61, 0.8 -0.49
CBA/J f 0.764 0.0727   5 0.0325 0.0951 0.66, 0.86 0.01
CE/J f 0.682 0.0409   5 0.0183 0.0599 0.64, 0.75 -0.44
DBA/2J f 0.746 0.0532   5 0.0238 0.0713 0.69, 0.81 -0.09
FVB/NJ f 0.82 0.066   5 0.0295 0.0804 0.76, 0.92 0.31
I/LnJ f 0.6 0.0837   5 0.0374 0.139 0.51, 0.7 -0.88
KK/HlJ f 0.854 0.0385   5 0.0172 0.045 0.81, 0.9 0.49
LG/J f 1.19 0.149   5 0.0667 0.126 1.01, 1.4 2.31
LP/J f 0.536 0.023   5 0.0103 0.043 0.51, 0.57 -1.23
MA/MyJ f 0.73 0.04   5 0.0179 0.0548 0.69, 0.79 -0.18
MRL/MpJ f 1.34 0.0485   5 0.0217 0.0362 1.3, 1.41 3.13
NOD/ShiLtJ f 0.704 0.0814   5 0.0364 0.116 0.63, 0.8 -0.32
NON/ShiLtJ f 0.806 0.0709   5 0.0317 0.088 0.69, 0.88 0.23
NOR/LtJ f 0.848 0.037   5 0.0166 0.0436 0.79, 0.88 0.46
NZW/LacJ f 0.922 0.0192   5 0.0086 0.0209 0.9, 0.95 0.86
P/J f 0.784 0.0627   5 0.028 0.08 0.7, 0.86 0.11
PL/J f 0.558 0.0455   5 0.0203 0.0815 0.51, 0.63 -1.11
PWK/PhJ f 0.518 0.0844   5 0.0377 0.163 0.42, 0.62 -1.33
RIIIS/J f 0.552 0.0415   5 0.0185 0.0751 0.49, 0.59 -1.14
SEA/GnJ f 0.814 0.0305   5 0.0136 0.0375 0.77, 0.85 0.28
SJL/J f 0.732 0.0694   5 0.031 0.0948 0.63, 0.81 -0.17
SM/J f 0.632 0.0249   5 0.0111 0.0394 0.59, 0.65 -0.71
SWR/J f 0.69 0.06   5 0.0268 0.087 0.6, 0.74 -0.4
WSB/EiJ f 0.435 0.0545   4 0.0272 0.125 0.39, 0.51 -1.78


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.596 0.0287 0.6528 0.5392
A/J f 0.686 0.0287 0.7428 0.6292
AKR/J f 0.882 0.0287 0.9388 0.8252
BALB/cByJ f 0.728 0.0287 0.7848 0.6712
BTBR T+ Itpr3tf/J f 1.066 0.0287 1.1228 1.0092
BUB/BnJ f 0.94 0.0287 0.9968 0.8832
C3H/HeJ f 0.776 0.0287 0.8328 0.7192
C57BL/6J f 0.764 0.0287 0.8208 0.7072
C57BLKS/J f 0.846 0.0287 0.9028 0.7892
C57BR/cdJ f 0.724 0.0287 0.7808 0.6672
C58/J f 0.672 0.0287 0.7288 0.6152
CBA/J f 0.764 0.0287 0.8208 0.7072
CE/J f 0.682 0.0287 0.7388 0.6252
DBA/2J f 0.746 0.0287 0.8028 0.6892
FVB/NJ f 0.82 0.0287 0.8768 0.7632
I/LnJ f 0.6 0.0287 0.6568 0.5432
KK/HlJ f 0.854 0.0287 0.9108 0.7972
LG/J f 1.186 0.0287 1.2428 1.1292
LP/J f 0.536 0.0287 0.5928 0.4792
MA/MyJ f 0.73 0.0287 0.7868 0.6732
MRL/MpJ f 1.34 0.0287 1.3968 1.2832
NOD/ShiLtJ f 0.704 0.0287 0.7608 0.6472
NON/ShiLtJ f 0.806 0.0287 0.8628 0.7492
NOR/LtJ f 0.848 0.0287 0.9048 0.7912
NZW/LacJ f 0.922 0.0287 0.9788 0.8652
P/J f 0.784 0.0287 0.8408 0.7272
PL/J f 0.558 0.0287 0.6148 0.5012
PWK/PhJ f 0.518 0.0287 0.5748 0.4612
RIIIS/J f 0.552 0.0287 0.6088 0.4952
SEA/GnJ f 0.814 0.0287 0.8708 0.7572
SJL/J f 0.732 0.0287 0.7888 0.6752
SM/J f 0.632 0.0287 0.6888 0.5752
SWR/J f 0.69 0.0287 0.7468 0.6332
WSB/EiJ f 0.435 0.0321 0.4985 0.3715




  GWAS USING LINEAR MIXED MODELS