Project measure / variable:   Harrill2   urine_vol_trt

ID, description, units MPD:44126   urine_vol_trt   urine volume   [mL]  DB289  
DB289 study
Data set, strains Harrill2   inbred   33 strains     sex: f     age: 6-8wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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Harrill2 - urine volume DB289



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested33 strains
Mean of the strain means1.91   mL
Median of the strain means1.72   mL
SD of the strain means± 1.17
Coefficient of variation (CV)0.612
Min–max range of strain means0.400   –   5.10   mL
Mean sample size per strain4.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 32 217.1253 6.7852 5.5079 < 0.0001
Residuals 129 158.9143 1.2319


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.73 0.303   5 0.136 0.416 0.4, 1.1 -1.01
A/J f 0.952 0.759   5 0.339 0.797 0.23, 2.0 -0.82
AKR/J f 0.88 0.239   5 0.107 0.271 0.6, 1.2 -0.88
BALB/cByJ f 1.12 0.502   5 0.224 0.448 0.8, 2.0 -0.68
BTBR T+ Itpr3tf/J f 1.6 0.883   5 0.395 0.552 0.9, 3.1 -0.27
BUB/BnJ f 2.07 0.418   5 0.187 0.202 1.6, 2.75 0.13
C3H/HeJ f 2.74 0.929   5 0.415 0.339 1.5, 4.0 0.71
C57BL/6J f 1.3 0.718   5 0.321 0.552 0.5, 2.2 -0.52
C57BLKS/J f 0.57 0.11   5 0.049 0.192 0.5, 0.75 -1.15
C57BR/cdJ f 2.12 0.52   4 0.26 0.245 1.5, 2.75 0.18
C58/J f 1.9 0.558   4 0.279 0.294 1.4, 2.5 -0.01
CBA/J f 1.01 0.549   5 0.245 0.546 0.35, 1.8 -0.77
CE/J f 1.14 0.503   5 0.225 0.441 0.35, 1.65 -0.66
DBA/2J f 1.72 0.55   5 0.246 0.32 1.1, 2.5 -0.16
FVB/NJ f 1.24 0.472   5 0.211 0.381 0.7, 2.0 -0.57
I/LnJ f 2.18 1.37   5 0.612 0.628 1.1, 4.5 0.23
KK/HlJ f 3.43 1.17   5 0.524 0.341 2.0, 5.1 1.3
LG/J f 2.37 0.573   5 0.256 0.242 1.5, 3.0 0.39
LP/J f 0.638 0.514   5 0.23 0.806 0.28, 1.5 -1.09
MA/MyJ f 1.3 0.701   5 0.313 0.539 0.55, 2.4 -0.52
MRL/MpJ f 3.8 1.8   5 0.804 0.473 1.5, 6.0 1.61
NOD/ShiLtJ f 1.45 1.11   5 0.496 0.766 0.25, 3.2 -0.39
NON/ShiLtJ f 2.8 0.694   5 0.31 0.248 2.0, 3.75 0.76
NOR/LtJ f 2.5 0.978   5 0.437 0.39 1.5, 3.5 0.5
NZW/LacJ f 2.78 0.832   5 0.372 0.299 2.0, 4.0 0.74
PL/J f 2.3 1.03   5 0.463 0.45 0.8, 3.5 0.33
PWK/PhJ f 2.0 0.872   5 0.39 0.436 1.3, 3.5 0.08
RIIIS/J f 0.7 0.316   5 0.141 0.452 0.4, 1.2 -1.04
SEA/GnJ f 3.24 2.53   5 1.13 0.782 0.7, 7.0 1.13
SJL/J f 5.1 3.27   5 1.46 0.642 1.4, 8.5 2.72
SM/J f 4.52 2.21   5 0.988 0.489 2.4, 8.0 2.23
SWR/J f 0.5 0.183   4 0.0913 0.365 0.3, 0.7 -1.21
WSB/EiJ f 0.4 0.122   5 0.0548 0.306 0.3, 0.6 -1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.73 0.4964 1.7121 0.0
A/J f 0.952 0.4964 1.9341 0.0
AKR/J f 0.88 0.4964 1.8621 0.0
BALB/cByJ f 1.12 0.4964 2.1021 0.1379
BTBR T+ Itpr3tf/J f 1.6 0.4964 2.5821 0.6179
BUB/BnJ f 2.07 0.4964 3.0521 1.0879
C3H/HeJ f 2.74 0.4964 3.7221 1.7579
C57BL/6J f 1.3 0.4964 2.2821 0.3179
C57BLKS/J f 0.57 0.4964 1.5521 0.0
C57BR/cdJ f 2.125 0.555 3.223 1.027
C58/J f 1.9 0.555 2.998 0.802
CBA/J f 1.006 0.4964 1.9881 0.0239
CE/J f 1.14 0.4964 2.1221 0.1579
DBA/2J f 1.72 0.4964 2.7021 0.7379
FVB/NJ f 1.24 0.4964 2.2221 0.2579
I/LnJ f 2.18 0.4964 3.1621 1.1979
KK/HlJ f 3.43 0.4964 4.4121 2.4479
LG/J f 2.37 0.4964 3.3521 1.3879
LP/J f 0.638 0.4964 1.6201 0.0
MA/MyJ f 1.3 0.4964 2.2821 0.3179
MRL/MpJ f 3.8 0.4964 4.7821 2.8179
NOD/ShiLtJ f 1.45 0.4964 2.4321 0.4679
NON/ShiLtJ f 2.8 0.4964 3.7821 1.8179
NOR/LtJ f 2.504 0.4964 3.4861 1.5219
NZW/LacJ f 2.78 0.4964 3.7621 1.7979
PL/J f 2.3 0.4964 3.2821 1.3179
PWK/PhJ f 2.0 0.4964 2.9821 1.0179
RIIIS/J f 0.7 0.4964 1.6821 0.0
SEA/GnJ f 3.24 0.4964 4.2221 2.2579
SJL/J f 5.1 0.4964 6.0821 4.1179
SM/J f 4.52 0.4964 5.5021 3.5379
SWR/J f 0.5 0.555 1.598 0.0
WSB/EiJ f 0.4 0.4964 1.3821 0.0




  GWAS USING LINEAR MIXED MODELS