Project measure / variable:   Harrill2   urine_vol_ctrl

ID, description, units MPD:44125   urine_vol_ctrl   urine volume   [mL]  control  
DB289 study
Data set, strains Harrill2   inbred   33 strains     sex: f     age: 6-8wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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Harrill2 - urine volume control



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested33 strains
Mean of the strain means1.81   mL
Median of the strain means1.60   mL
SD of the strain means± 1.05
Coefficient of variation (CV)0.583
Min–max range of strain means0.600   –   4.56   mL
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 32 174.9726 5.4679 4.4008 < 0.0001
Residuals 131 162.7648 1.2425


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.754 0.248   5 0.111 0.328 0.43, 1.0 -1.0
A/J f 0.736 0.337   5 0.151 0.458 0.18, 1.0 -1.02
AKR/J f 1.1 0.292   5 0.13 0.265 0.6, 1.3 -0.67
BALB/cByJ f 1.76 0.522   5 0.234 0.297 1.2, 2.3 -0.04
BTBR T+ Itpr3tf/J f 1.32 0.295   5 0.132 0.223 1.0, 1.6 -0.46
BUB/BnJ f 2.04 0.36   5 0.161 0.176 1.55, 2.5 0.22
C3H/HeJ f 1.94 1.21   5 0.542 0.625 1.0, 4.0 0.13
C57BL/6J f 0.7 0.187   5 0.0837 0.267 0.5, 0.9 -1.05
C57BLKS/J f 0.964 0.505   5 0.226 0.524 0.5, 1.7 -0.8
C57BR/cdJ f 4.17 2.75   5 1.23 0.659 1.6, 8.5 2.25
C58/J f 1.88 1.55   5 0.693 0.825 0.4, 4.5 0.07
CBA/J f 0.892 0.44   5 0.197 0.493 0.45, 1.5 -0.87
CE/J f 1.22 0.492   5 0.22 0.403 0.75, 1.75 -0.56
DBA/2J f 0.96 0.114   5 0.051 0.119 0.8, 1.1 -0.8
FVB/NJ f 2.2 0.828   5 0.37 0.376 1.2, 3.1 0.38
I/LnJ f 1.6 0.768   5 0.344 0.48 0.7, 2.8 -0.2
KK/HlJ f 4.56 1.54   5 0.687 0.337 3.0, 7.0 2.62
LG/J f 2.71 0.677   5 0.303 0.25 2.0, 3.5 0.86
LP/J f 0.88 0.409   5 0.183 0.465 0.37, 1.3 -0.88
MA/MyJ f 1.2 0.232   5 0.104 0.193 0.9, 1.55 -0.58
MRL/MpJ f 3.85 2.55   5 1.14 0.662 1.25, 8.0 1.94
NOD/ShiLtJ f 3.25 2.96   4 1.48 0.91 1.0, 7.5 1.37
NON/ShiLtJ f 2.2 1.39   5 0.619 0.63 0.5, 3.75 0.38
NOR/LtJ f 1.8 0.481   5 0.215 0.267 1.25, 2.5 0.0
NZW/LacJ f 2.54 0.781   5 0.349 0.307 1.6, 3.75 0.7
PL/J f 2.23 0.738   5 0.33 0.331 1.4, 3.35 0.4
PWK/PhJ f 0.976 0.532   5 0.238 0.545 0.1, 1.4 -0.79
RIIIS/J f 1.06 0.434   5 0.194 0.409 0.6, 1.6 -0.71
SEA/GnJ f 3.1 2.19   5 0.979 0.706 0.1, 5.9 1.23
SJL/J f 2.3 1.24   5 0.554 0.539 1.5, 4.5 0.47
SM/J f 1.34 0.41   5 0.183 0.306 1.0, 2.0 -0.44
SWR/J f 0.74 0.222   5 0.0992 0.3 0.5, 1.0 -1.01
WSB/EiJ f 0.6 0.316   5 0.141 0.527 0.3, 1.1 -1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.754 0.4985 1.7401 0.0
A/J f 0.736 0.4985 1.7221 0.0
AKR/J f 1.1 0.4985 2.0861 0.1139
BALB/cByJ f 1.76 0.4985 2.7461 0.7739
BTBR T+ Itpr3tf/J f 1.32 0.4985 2.3061 0.3339
BUB/BnJ f 2.04 0.4985 3.0261 1.0539
C3H/HeJ f 1.94 0.4985 2.9261 0.9539
C57BL/6J f 0.7 0.4985 1.6861 0.0
C57BLKS/J f 0.964 0.4985 1.9501 0.0
C57BR/cdJ f 4.17 0.4985 5.1561 3.1839
C58/J f 1.88 0.4985 2.8661 0.8939
CBA/J f 0.892 0.4985 1.8781 0.0
CE/J f 1.22 0.4985 2.2061 0.2339
DBA/2J f 0.96 0.4985 1.9461 0.0
FVB/NJ f 2.2 0.4985 3.1861 1.2139
I/LnJ f 1.6 0.4985 2.5861 0.6139
KK/HlJ f 4.56 0.4985 5.5461 3.5739
LG/J f 2.71 0.4985 3.6961 1.7239
LP/J f 0.88 0.4985 1.8661 0.0
MA/MyJ f 1.2 0.4985 2.1861 0.2139
MRL/MpJ f 3.85 0.4985 4.8361 2.8639
NOD/ShiLtJ f 3.25 0.5573 4.3525 2.1475
NON/ShiLtJ f 2.2 0.4985 3.1861 1.2139
NOR/LtJ f 1.8 0.4985 2.7861 0.8139
NZW/LacJ f 2.54 0.4985 3.5261 1.5539
PL/J f 2.23 0.4985 3.2161 1.2439
PWK/PhJ f 0.976 0.4985 1.9621 0.0
RIIIS/J f 1.06 0.4985 2.0461 0.0739
SEA/GnJ f 3.1 0.4985 4.0861 2.1139
SJL/J f 2.3 0.4985 3.2861 1.3139
SM/J f 1.34 0.4985 2.3261 0.3539
SWR/J f 0.74 0.4985 1.7261 0.0
WSB/EiJ f 0.6 0.4985 1.5861 0.0




  GWAS USING LINEAR MIXED MODELS