Project measure / variable:   Williams1   naiveT_adj

ID, description, units MPD:42906   naiveT_adj   naive CD4 T cells (CD25- CD44lo; as percentage of CD4 T cells)   [%]  
Data set, strains Williams1   inbred   5 strains     sex: f     age: 8wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Williams1 - naive CD4 T cells (CD25- CD44lo; as percentage of CD4 T cells)

129X1/SvJArcC57BL/6JArcDBA/2JArcA/JArcBALB/cArc % 66687072747678808284868890femalemale


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested5 strains
Mean of the strain means77.5   %
Median of the strain means76.9   %
SD of the strain means± 6.51
Coefficient of variation (CV)0.0840
Min–max range of strain means69.6   –   87.4   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 509.6067 127.4017 20.9565 0.0001
Residuals 10 60.7933 6.0793


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJArc f 87.4 1.5   3 0.867 0.0172 85.9, 88.9 1.52
A/JArc f 74.8 3.46   3 2.0 0.0463 71.5, 78.4 -0.41
BALB/cArc f 69.6 2.61   3 1.51 0.0375 66.7, 71.7 -1.21
C57BL/6JArc f 78.7 2.36   3 1.36 0.03 76.9, 81.4 0.19
DBA/2JArc f 76.9 1.93   3 1.12 0.0251 74.7, 78.1 -0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJArc f 87.4333 1.4235 90.6052 84.2615
A/JArc f 74.7667 1.4235 77.9385 71.5948
BALB/cArc f 69.6333 1.4235 72.8052 66.4615
C57BL/6JArc f 78.7333 1.4235 81.9052 75.5615
DBA/2JArc f 76.9333 1.4235 80.1052 73.7615




GWAS analysis not available: SNP data is not available for enough strains (at least 4)