Project measure / variable:   Donahue6   pct_NK_mature

ID, description, units MPD:41508   pct_NK_mature   mature natural killer (NK) cells (percentage of viable WBC)   [%]  
Data set, strains Donahue6   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Donahue6 - mature natural killer (NK) cells (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means4.50   % 4.42   %
Median of the strain means4.35   % 4.68   %
SD of the strain means± 1.71 ± 1.50
Coefficient of variation (CV)0.379 0.339
Min–max range of strain means0.891   –   7.81   % 0.809   –   7.61   %
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.0737 3.0737 1.0209 0.3129
strain 27 971.2483 35.9722 11.9474 < 0.0001
sex:strain 27 172.7783 6.3992 2.1254 0.001
Residuals 419 1261.5533 3.0109


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 7.27 3.68   8 1.3 0.506 1.46, 12.5 1.62
B6.PWD-Chr1 m 4.86 3.2   8 1.13 0.659 1.43, 8.45 0.29
B6.PWD-Chr10.1 f 6.32 2.37   11 0.715 0.375 3.61, 9.94 1.06
B6.PWD-Chr10.1 m 4.78 2.19   8 0.775 0.459 1.39, 7.41 0.24
B6.PWD-Chr10.2 f 6.24 1.62   8 0.572 0.26 3.88, 8.74 1.02
B6.PWD-Chr10.2 m 5.63 0.857   8 0.303 0.152 4.88, 7.51 0.81
B6.PWD-Chr10.3 f 3.58 1.36   8 0.482 0.381 1.62, 6.24 -0.54
B6.PWD-Chr10.3 m 3.74 1.31   8 0.463 0.35 0.86, 5.11 -0.45
B6.PWD-Chr11.1 f 4.48 0.856   12 0.247 0.191 3.15, 5.79 -0.01
B6.PWD-Chr11.1 m 5.21 2.27   12 0.654 0.435 2.55, 10.5 0.53
B6.PWD-Chr11.2 f 2.21 1.65   9 0.551 0.748 0.26, 4.91 -1.34
B6.PWD-Chr11.2 m 2.68 1.71   10 0.542 0.64 0.32, 6.2 -1.16
B6.PWD-Chr11.3 f 5.7 0.993   8 0.351 0.174 4.48, 7.62 0.7
B6.PWD-Chr11.3 m 5.55 1.06   10 0.337 0.192 3.99, 7.87 0.75
B6.PWD-Chr12 f 5.5 1.34   8 0.475 0.244 2.98, 7.39 0.58
B6.PWD-Chr12 m 4.57 0.441   8 0.156 0.0965 3.99, 5.08 0.1
B6.PWD-Chr13 f 3.61 1.04   8 0.367 0.287 1.98, 5.47 -0.52
B6.PWD-Chr13 m 4.06 1.17   9 0.389 0.287 2.5, 5.71 -0.24
B6.PWD-Chr14 f 2.61 0.869   8 0.307 0.333 0.75, 3.6 -1.11
B6.PWD-Chr14 m 2.68 0.502   10 0.159 0.187 2.1, 3.69 -1.16
B6.PWD-Chr15 f 6.57 3.06   7 1.16 0.466 2.29, 9.61 1.21
B6.PWD-Chr15 m 4.53 1.9   8 0.672 0.42 2.36, 7.02 0.07
B6.PWD-Chr16 f 4.5 1.33   8 0.472 0.297 2.35, 5.91 0.0
B6.PWD-Chr16 m 3.92 1.04   8 0.367 0.265 2.63, 5.63 -0.33
B6.PWD-Chr17 f 3.38 0.762   8 0.269 0.225 2.41, 4.31 -0.66
B6.PWD-Chr17 m 5.28 1.36   8 0.482 0.258 3.52, 7.37 0.57
B6.PWD-Chr18 f 2.96 0.576   8 0.204 0.195 2.22, 3.94 -0.9
B6.PWD-Chr18 m 2.25 0.392   8 0.138 0.174 1.58, 2.63 -1.45
B6.PWD-Chr19 f 4.27 1.7   8 0.6 0.397 1.72, 6.88 -0.14
B6.PWD-Chr19 m 3.54 1.85   7 0.699 0.523 1.58, 6.38 -0.59
B6.PWD-Chr2 f 7.81 2.99   10 0.946 0.383 3.81, 14.2 1.94
B6.PWD-Chr2 m 7.38 1.97   8 0.698 0.268 4.63, 11.3 1.98
B6.PWD-Chr3 f 4.23 2.62   8 0.926 0.62 2.24, 10.0 -0.16
B6.PWD-Chr3 m 5.74 1.2   8 0.423 0.209 4.68, 7.49 0.88
B6.PWD-Chr5 f 2.71 0.612   8 0.216 0.225 1.86, 3.57 -1.05
B6.PWD-Chr5 m 2.78 1.44   8 0.508 0.517 0.51, 4.88 -1.09
B6.PWD-Chr6 f 4.43 1.98   8 0.7 0.447 2.1, 8.3 -0.04
B6.PWD-Chr6 m 4.95 2.55   8 0.9 0.514 1.16, 8.37 0.35
B6.PWD-Chr8 f 2.65 0.492   5 0.22 0.186 2.07, 3.16 -1.09
B6.PWD-Chr8 m 3.16 0.762   5 0.341 0.241 2.16, 4.24 -0.84
B6.PWD-Chr9 f 3.87 2.02   8 0.714 0.522 0.76, 7.56 -0.37
B6.PWD-Chr9 m 5.41 1.66   8 0.586 0.306 2.94, 8.13 0.66
B6.PWD-ChrX.1 f 5.53 2.61   8 0.922 0.471 1.6, 9.36 0.6
B6.PWD-ChrX.1 m 4.93 2.06   7 0.779 0.418 2.67, 8.55 0.34
B6.PWD-ChrX.2 f 4.17 1.64   8 0.581 0.394 2.17, 7.75 -0.2
B6.PWD-ChrX.2 m 7.61 2.17   9 0.725 0.286 5.7, 13.1 2.13
B6.PWD-ChrX.3 f 7.55 0.969   8 0.343 0.128 6.24, 9.33 1.78
B6.PWD-ChrX.3 m 5.51 1.42   8 0.503 0.258 3.31, 8.25 0.73
B6.PWD-ChrY f 5.1 3.0   8 1.06 0.589 2.24, 9.02 0.35
B6.PWD-ChrY m 5.23 3.23   8 1.14 0.619 1.93, 9.76 0.54
B6.PWD-mt f 3.16 0.542   7 0.205 0.172 2.52, 4.09 -0.79
B6.PWD-mt m 2.9 1.02   8 0.361 0.353 1.89, 4.92 -1.01
C57BL/6J f 4.79 0.903   16 0.226 0.188 3.2, 7.14 0.17
C57BL/6J m 4.06 0.74   16 0.185 0.182 2.77, 5.47 -0.24
PWD/PhJ f 0.891 0.134   7 0.0506 0.15 0.718, 1.14 -2.12
PWD/PhJ m 0.809 0.351   8 0.124 0.433 0.513, 1.57 -2.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 7.2725 0.6135 8.4784 6.0666
B6.PWD-Chr1 m 4.8588 0.6135 6.0646 3.6529
B6.PWD-Chr10.1 f 6.3245 0.5232 7.3529 5.2962
B6.PWD-Chr10.1 m 4.7775 0.6135 5.9834 3.5716
B6.PWD-Chr10.2 f 6.2363 0.6135 7.4421 5.0304
B6.PWD-Chr10.2 m 5.6325 0.6135 6.8384 4.4266
B6.PWD-Chr10.3 f 3.585 0.6135 4.7909 2.3791
B6.PWD-Chr10.3 m 3.7425 0.6135 4.9484 2.5366
B6.PWD-Chr11.1 f 4.485 0.5009 5.4696 3.5004
B6.PWD-Chr11.1 m 5.2117 0.5009 6.1963 4.2271
B6.PWD-Chr11.2 f 2.2122 0.5784 3.3491 1.0753
B6.PWD-Chr11.2 m 2.676 0.5487 3.7546 1.5974
B6.PWD-Chr11.3 f 5.6962 0.6135 6.9021 4.4904
B6.PWD-Chr11.3 m 5.555 0.5487 6.6336 4.4764
B6.PWD-Chr12 f 5.4987 0.6135 6.7046 4.2929
B6.PWD-Chr12 m 4.57 0.6135 5.7759 3.3641
B6.PWD-Chr13 f 3.6145 0.6135 4.8204 2.4086
B6.PWD-Chr13 m 4.0578 0.5784 5.1947 2.9209
B6.PWD-Chr14 f 2.6125 0.6135 3.8184 1.4066
B6.PWD-Chr14 m 2.682 0.5487 3.7606 1.6034
B6.PWD-Chr15 f 6.5743 0.6558 7.8634 5.2851
B6.PWD-Chr15 m 4.5312 0.6135 5.7371 3.3254
B6.PWD-Chr16 f 4.4962 0.6135 5.7021 3.2904
B6.PWD-Chr16 m 3.9187 0.6135 5.1246 2.7129
B6.PWD-Chr17 f 3.385 0.6135 4.5909 2.1791
B6.PWD-Chr17 m 5.275 0.6135 6.4809 4.0691
B6.PWD-Chr18 f 2.9625 0.6135 4.1684 1.7566
B6.PWD-Chr18 m 2.2513 0.6135 3.4571 1.0454
B6.PWD-Chr19 f 4.2713 0.6135 5.4771 3.0654
B6.PWD-Chr19 m 3.5357 0.6558 4.8249 2.2466
B6.PWD-Chr2 f 7.81 0.5487 8.8886 6.7314
B6.PWD-Chr2 m 7.3775 0.6135 8.5834 6.1716
B6.PWD-Chr3 f 4.2275 0.6135 5.4334 3.0216
B6.PWD-Chr3 m 5.7363 0.6135 6.9421 4.5304
B6.PWD-Chr5 f 2.7125 0.6135 3.9184 1.5066
B6.PWD-Chr5 m 2.7787 0.6135 3.9846 1.5729
B6.PWD-Chr6 f 4.433 0.6135 5.6389 3.2271
B6.PWD-Chr6 m 4.9529 0.6135 6.1588 3.747
B6.PWD-Chr8 f 2.646 0.776 4.1713 1.1207
B6.PWD-Chr8 m 3.16 0.776 4.6853 1.6347
B6.PWD-Chr9 f 3.8675 0.6135 5.0734 2.6616
B6.PWD-Chr9 m 5.4087 0.6135 6.6146 4.2029
B6.PWD-ChrX.1 f 5.5313 0.6135 6.7371 4.3254
B6.PWD-ChrX.1 m 4.9329 0.6558 6.222 3.6437
B6.PWD-ChrX.2 f 4.175 0.6135 5.3809 2.9691
B6.PWD-ChrX.2 m 7.6144 0.5784 8.7514 6.4775
B6.PWD-ChrX.3 f 7.555 0.6135 8.7609 6.3491
B6.PWD-ChrX.3 m 5.5088 0.6135 6.7146 4.3029
B6.PWD-ChrY f 5.0987 0.6135 6.3046 3.8929
B6.PWD-ChrY m 5.2262 0.6135 6.4321 4.0204
B6.PWD-mt f 3.1571 0.6558 4.4463 1.868
B6.PWD-mt m 2.895 0.6135 4.1009 1.6891
C57BL/6J f 4.7913 0.4338 5.6439 3.9386
C57BL/6J m 4.0631 0.4338 4.9158 3.2104
PWD/PhJ f 0.8906 0.6558 2.1797 0.0
PWD/PhJ m 0.809 0.6135 2.0149 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 6.0656 0.4338 6.9183 5.2129
B6.PWD-Chr10.1 both 5.551 0.4031 6.3434 4.7586
B6.PWD-Chr10.2 both 5.9344 0.4338 6.7871 5.0817
B6.PWD-Chr10.3 both 3.6637 0.4338 4.5164 2.8111
B6.PWD-Chr11.1 both 4.8483 0.3542 5.5446 4.1521
B6.PWD-Chr11.2 both 2.4441 0.3986 3.2277 1.6605
B6.PWD-Chr11.3 both 5.6256 0.4115 6.4346 4.8167
B6.PWD-Chr12 both 5.0344 0.4338 5.8871 4.1817
B6.PWD-Chr13 both 3.8361 0.4216 4.6648 3.0075
B6.PWD-Chr14 both 2.6472 0.4115 3.4562 1.8383
B6.PWD-Chr15 both 5.5528 0.449 6.4354 4.6702
B6.PWD-Chr16 both 4.2075 0.4338 5.0602 3.3548
B6.PWD-Chr17 both 4.33 0.4338 5.1827 3.4773
B6.PWD-Chr18 both 2.6069 0.4338 3.4596 1.7542
B6.PWD-Chr19 both 3.9035 0.449 4.7861 3.0209
B6.PWD-Chr2 both 7.5937 0.4115 8.4027 6.7848
B6.PWD-Chr3 both 4.9819 0.4338 5.8346 4.1292
B6.PWD-Chr5 both 2.7456 0.4338 3.5983 1.8929
B6.PWD-Chr6 both 4.6929 0.4338 5.5456 3.8402
B6.PWD-Chr8 both 2.903 0.5487 3.9816 1.8244
B6.PWD-Chr9 both 4.6381 0.4338 5.4908 3.7854
B6.PWD-ChrX.1 both 5.2321 0.449 6.1147 4.3494
B6.PWD-ChrX.2 both 5.8947 0.4216 6.7234 5.0661
B6.PWD-ChrX.3 both 6.5319 0.4338 7.3846 5.6792
B6.PWD-ChrY both 5.1625 0.4338 6.0152 4.3098
B6.PWD-mt both 3.0261 0.449 3.9087 2.1435
C57BL/6J both 4.4272 0.3067 5.0301 3.8242
PWD/PhJ both 0.8498 0.449 1.7324 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA