Phenotype measure

ID, description, units MPD:41507   pct_NK_cells   natural killer (NK) cells (percent of viable WBC)   [%]
Data set, strains Donahue6   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure immune cell quantification
Ontology mappings


  STRAIN COMPARISON PLOT
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Donahue6 - natural killer (NK) cells (percent of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means5.23   % 5.43   %
Median of the strain means5.05   % 5.67   %
SD of the strain means± 1.92 ± 1.92
Coefficient of variation (CV)0.367 0.354
Min–max range of strain means0.927   –   9.83   % 0.856   –   10.9   %
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.6487 1.6487 0.4426 0.5062
strain 27 1268.5769 46.9843 12.6137 < 0.0001
sex:strain 27 357.2916 13.233 3.5526 < 0.0001
Residuals 419 1560.7213 3.7249


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 8.22 4.03   8 1.43 0.49 1.85, 14.0 1.56
B6.PWD-Chr1 m 5.9 3.71   8 1.31 0.628 1.87, 9.87 0.25
B6.PWD-Chr10.1 f 7.41 2.85   11 0.861 0.385 4.33, 11.7 1.13
B6.PWD-Chr10.1 m 5.85 2.36   8 0.835 0.404 2.24, 9.04 0.22
B6.PWD-Chr10.2 f 6.92 1.53   8 0.54 0.221 4.67, 9.06 0.88
B6.PWD-Chr10.2 m 6.84 0.639   8 0.226 0.0935 6.21, 8.01 0.74
B6.PWD-Chr10.3 f 4.45 1.63   8 0.577 0.367 2.05, 7.6 -0.41
B6.PWD-Chr10.3 m 4.56 1.54   8 0.545 0.339 1.03, 6.06 -0.45
B6.PWD-Chr11.1 f 5.07 0.883   12 0.255 0.174 3.85, 6.27 -0.09
B6.PWD-Chr11.1 m 5.96 2.23   12 0.642 0.373 3.0, 11.2 0.28
B6.PWD-Chr11.2 f 2.98 1.84   9 0.614 0.619 0.529, 5.68 -1.17
B6.PWD-Chr11.2 m 3.96 1.68   10 0.531 0.423 0.8, 6.66 -0.76
B6.PWD-Chr11.3 f 6.25 1.15   8 0.405 0.184 4.95, 8.7 0.53
B6.PWD-Chr11.3 m 6.16 1.12   10 0.353 0.181 4.39, 8.5 0.38
B6.PWD-Chr12 f 6.23 1.4   8 0.494 0.224 3.65, 8.3 0.52
B6.PWD-Chr12 m 5.5 0.482   8 0.17 0.0875 4.92, 6.29 0.04
B6.PWD-Chr13 f 4.02 1.08   8 0.383 0.269 2.29, 5.92 -0.63
B6.PWD-Chr13 m 4.45 1.21   9 0.403 0.272 2.87, 6.17 -0.51
B6.PWD-Chr14 f 3.28 1.0   8 0.354 0.305 1.22, 4.47 -1.02
B6.PWD-Chr14 m 3.59 0.476   10 0.151 0.133 3.25, 4.8 -0.95
B6.PWD-Chr15 f 7.48 3.41   7 1.29 0.457 2.82, 10.9 1.17
B6.PWD-Chr15 m 5.34 2.04   8 0.72 0.381 2.9, 7.89 -0.04
B6.PWD-Chr16 f 5.36 1.56   8 0.55 0.29 2.64, 7.23 0.07
B6.PWD-Chr16 m 4.75 1.44   8 0.511 0.304 3.14, 7.37 -0.35
B6.PWD-Chr17 f 3.77 0.796   8 0.281 0.211 2.79, 4.65 -0.76
B6.PWD-Chr17 m 7.06 1.51   8 0.533 0.213 5.08, 9.11 0.85
B6.PWD-Chr18 f 3.36 0.582   8 0.206 0.173 2.62, 4.27 -0.98
B6.PWD-Chr18 m 2.76 0.445   8 0.157 0.161 2.07, 3.28 -1.39
B6.PWD-Chr19 f 4.92 1.85   8 0.655 0.376 2.08, 7.57 -0.16
B6.PWD-Chr19 m 4.08 1.96   7 0.743 0.481 1.98, 7.04 -0.7
B6.PWD-Chr2 f 8.07 2.98   10 0.943 0.37 4.08, 14.5 1.48
B6.PWD-Chr2 m 7.6 2.01   8 0.712 0.265 4.83, 11.6 1.13
B6.PWD-Chr3 f 5.03 2.79   8 0.987 0.555 2.94, 11.1 -0.11
B6.PWD-Chr3 m 7.44 1.32   8 0.466 0.177 6.13, 9.34 1.05
B6.PWD-Chr5 f 3.88 1.08   8 0.382 0.278 2.48, 5.94 -0.71
B6.PWD-Chr5 m 3.55 1.52   8 0.538 0.429 1.12, 5.46 -0.98
B6.PWD-Chr6 f 5.43 2.76   8 0.975 0.508 2.96, 11.5 0.1
B6.PWD-Chr6 m 6.94 3.16   8 1.12 0.455 1.66, 10.5 0.79
B6.PWD-Chr8 f 3.0 0.506   5 0.226 0.169 2.46, 3.58 -1.16
B6.PWD-Chr8 m 3.6 0.856   5 0.383 0.238 2.51, 4.81 -0.95
B6.PWD-Chr9 f 4.69 2.31   8 0.816 0.492 0.838, 8.61 -0.28
B6.PWD-Chr9 m 6.31 1.74   8 0.616 0.276 3.73, 8.86 0.46
B6.PWD-ChrX.1 f 6.3 3.06   8 1.08 0.486 1.79, 10.7 0.56
B6.PWD-ChrX.1 m 6.02 2.69   7 1.02 0.447 3.3, 10.6 0.31
B6.PWD-ChrX.2 f 4.56 1.62   8 0.573 0.355 2.5, 8.07 -0.35
B6.PWD-ChrX.2 m 10.9 2.04   9 0.681 0.187 8.36, 15.1 2.85
B6.PWD-ChrX.3 f 9.83 0.805   8 0.284 0.0818 8.72, 11.1 2.39
B6.PWD-ChrX.3 m 7.17 2.04   8 0.722 0.285 3.94, 9.44 0.91
B6.PWD-ChrY f 5.8 3.35   8 1.19 0.579 2.62, 9.98 0.3
B6.PWD-ChrY m 6.27 3.73   8 1.32 0.595 2.46, 11.4 0.44
B6.PWD-mt f 3.75 0.706   7 0.267 0.188 2.96, 5.02 -0.77
B6.PWD-mt m 3.56 1.29   8 0.454 0.361 2.4, 5.93 -0.97
C57BL/6J f 5.55 0.869   16 0.217 0.157 4.3, 7.68 0.16
C57BL/6J m 4.96 0.851   16 0.213 0.172 3.51, 6.24 -0.24
PWD/PhJ f 0.927 0.134   7 0.0506 0.145 0.748, 1.17 -2.24
PWD/PhJ m 0.856 0.349   8 0.123 0.408 0.553, 1.61 -2.38


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 8.222 0.6824 9.5633 6.8807
B6.PWD-Chr1 m 5.9013 0.6824 7.2425 4.56
B6.PWD-Chr10.1 f 7.4094 0.5819 8.5532 6.2655
B6.PWD-Chr10.1 m 5.8489 0.6824 7.1901 4.5076
B6.PWD-Chr10.2 f 6.918 0.6824 8.2593 5.5767
B6.PWD-Chr10.2 m 6.8388 0.6824 8.18 5.4975
B6.PWD-Chr10.3 f 4.4461 0.6824 5.7874 3.1049
B6.PWD-Chr10.3 m 4.5553 0.6824 5.8966 3.2141
B6.PWD-Chr11.1 f 5.0677 0.5571 6.1629 3.9726
B6.PWD-Chr11.1 m 5.9603 0.5571 7.0554 4.8651
B6.PWD-Chr11.2 f 2.976 0.6433 4.2406 1.7114
B6.PWD-Chr11.2 m 3.9647 0.6103 5.1644 2.765
B6.PWD-Chr11.3 f 6.245 0.6824 7.5863 4.9037
B6.PWD-Chr11.3 m 6.161 0.6103 7.3607 4.9613
B6.PWD-Chr12 f 6.2296 0.6824 7.5709 4.8884
B6.PWD-Chr12 m 5.5044 0.6824 6.8456 4.1631
B6.PWD-Chr13 f 4.0182 0.6824 5.3595 2.677
B6.PWD-Chr13 m 4.4456 0.6433 5.7101 3.181
B6.PWD-Chr14 f 3.2774 0.6824 4.6186 1.9361
B6.PWD-Chr14 m 3.5907 0.6103 4.7904 2.391
B6.PWD-Chr15 f 7.4756 0.7295 8.9094 6.0417
B6.PWD-Chr15 m 5.3411 0.6824 6.6824 3.9999
B6.PWD-Chr16 f 5.3617 0.6824 6.703 4.0205
B6.PWD-Chr16 m 4.7516 0.6824 6.0929 3.4104
B6.PWD-Chr17 f 3.7735 0.6824 5.1148 2.4322
B6.PWD-Chr17 m 7.0578 0.6824 8.399 5.7165
B6.PWD-Chr18 f 3.3565 0.6824 4.6978 2.0152
B6.PWD-Chr18 m 2.7623 0.6824 4.1035 1.421
B6.PWD-Chr19 f 4.9181 0.6824 6.2594 3.5769
B6.PWD-Chr19 m 4.0837 0.7295 5.5176 2.6498
B6.PWD-Chr2 f 8.067 0.6103 9.2667 6.8673
B6.PWD-Chr2 m 7.5962 0.6824 8.9375 6.255
B6.PWD-Chr3 f 5.0346 0.6824 6.3759 3.6934
B6.PWD-Chr3 m 7.4376 0.6824 8.7789 6.0964
B6.PWD-Chr5 f 3.8844 0.6824 5.2257 2.5431
B6.PWD-Chr5 m 3.5481 0.6824 4.8894 2.2069
B6.PWD-Chr6 f 5.4272 0.6824 6.7685 4.086
B6.PWD-Chr6 m 6.938 0.6824 8.2793 5.5967
B6.PWD-Chr8 f 3.002 0.8631 4.6986 1.3054
B6.PWD-Chr8 m 3.598 0.8631 5.2946 1.9014
B6.PWD-Chr9 f 4.6884 0.6824 6.0296 3.3471
B6.PWD-Chr9 m 6.3129 0.6824 7.6541 4.9716
B6.PWD-ChrX.1 f 6.301 0.6824 7.6423 4.9597
B6.PWD-ChrX.1 m 6.0173 0.7295 7.4512 4.5834
B6.PWD-ChrX.2 f 4.5638 0.6824 5.905 3.2225
B6.PWD-ChrX.2 m 10.9454 0.6433 12.21 9.6809
B6.PWD-ChrX.3 f 9.8325 0.6824 11.1738 8.4912
B6.PWD-ChrX.3 m 7.1659 0.6824 8.5071 5.8246
B6.PWD-ChrY f 5.7952 0.6824 7.1364 4.4539
B6.PWD-ChrY m 6.2725 0.6824 7.6138 4.9312
B6.PWD-mt f 3.7539 0.7295 5.1878 2.3201
B6.PWD-mt m 3.5621 0.6824 4.9034 2.2209
C57BL/6J f 5.5534 0.4825 6.5019 4.605
C57BL/6J m 4.9566 0.4825 5.905 4.0082
PWD/PhJ f 0.9266 0.7295 2.3604 0.0
PWD/PhJ m 0.8561 0.6824 2.1974 0.0


  LEAST SQUARES MEANS (ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 7.0616 0.4825 8.01 6.1132
B6.PWD-Chr10.1 both 6.6291 0.4484 7.5105 5.7477
B6.PWD-Chr10.2 both 6.8784 0.4825 7.8268 5.93
B6.PWD-Chr10.3 both 4.5007 0.4825 5.4491 3.5523
B6.PWD-Chr11.1 both 5.514 0.394 6.2884 4.7396
B6.PWD-Chr11.2 both 3.4704 0.4434 4.3419 2.5988
B6.PWD-Chr11.3 both 6.203 0.4577 7.1027 5.3033
B6.PWD-Chr12 both 5.867 0.4825 6.8154 4.9186
B6.PWD-Chr13 both 4.2319 0.4689 5.1536 3.3102
B6.PWD-Chr14 both 3.434 0.4577 4.3338 2.5343
B6.PWD-Chr15 both 6.4083 0.4994 7.3901 5.4266
B6.PWD-Chr16 both 5.0567 0.4825 6.0051 4.1083
B6.PWD-Chr17 both 5.4156 0.4825 6.364 4.4672
B6.PWD-Chr18 both 3.0594 0.4825 4.0078 2.111
B6.PWD-Chr19 both 4.5009 0.4994 5.4826 3.5192
B6.PWD-Chr2 both 7.8316 0.4577 8.7314 6.9319
B6.PWD-Chr3 both 6.2361 0.4825 7.1845 5.2877
B6.PWD-Chr5 both 3.7163 0.4825 4.6647 2.7678
B6.PWD-Chr6 both 6.1826 0.4825 7.131 5.2342
B6.PWD-Chr8 both 3.3 0.6103 4.4997 2.1003
B6.PWD-Chr9 both 5.5006 0.4825 6.449 4.5522
B6.PWD-ChrX.1 both 6.1591 0.4994 7.1408 5.1774
B6.PWD-ChrX.2 both 7.7546 0.4689 8.6763 6.8329
B6.PWD-ChrX.3 both 8.4992 0.4825 9.4476 7.5508
B6.PWD-ChrY both 6.0338 0.4825 6.9822 5.0854
B6.PWD-mt both 3.658 0.4994 4.6397 2.6763
C57BL/6J both 5.255 0.3412 5.9257 4.5844
PWD/PhJ both 0.8913 0.4994 1.8731 0.0