Project measure / variable:   Donahue6   pct_EOS

ID, description, units MPD:41502   pct_EOS   eosinophil differential (percentage of viable WBC)   [%]  
Data set, strains Donahue6   B6.PWD consomic w/par   28 strains     sex: both     age: 7wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Donahue6 - eosinophil differential (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means2.63   % 2.60   %
Median of the strain means2.30   % 2.48   %
SD of the strain means± 1.38 ± 0.857
Coefficient of variation (CV)0.522 0.329
Min–max range of strain means1.41   –   8.59   % 1.31   –   5.28   %
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.5119 0.5119 0.4487 0.5033
strain 27 470.5754 17.4287 15.2773 < 0.0001
sex:strain 27 105.8121 3.919 3.4352 < 0.0001
Residuals 419 478.0067 1.1408


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 2.84 0.901   8 0.319 0.317 1.36, 4.11 0.15
B6.PWD-Chr1 m 3.14 1.94   8 0.686 0.617 1.45, 6.74 0.62
B6.PWD-Chr10.1 f 3.04 1.03   11 0.31 0.339 1.6, 4.53 0.29
B6.PWD-Chr10.1 m 2.64 0.907   8 0.321 0.344 1.11, 3.73 0.04
B6.PWD-Chr10.2 f 2.25 0.679   8 0.24 0.302 1.09, 3.11 -0.28
B6.PWD-Chr10.2 m 2.26 0.28   8 0.0991 0.124 1.88, 2.66 -0.4
B6.PWD-Chr10.3 f 2.77 1.2   8 0.425 0.435 1.3, 5.08 0.1
B6.PWD-Chr10.3 m 3.12 1.09   8 0.386 0.351 0.79, 4.62 0.6
B6.PWD-Chr11.1 f 2.06 0.364   12 0.105 0.176 1.68, 2.76 -0.42
B6.PWD-Chr11.1 m 1.87 0.419   12 0.121 0.224 1.39, 2.95 -0.86
B6.PWD-Chr11.2 f 1.67 0.936   9 0.312 0.562 0.24, 2.81 -0.7
B6.PWD-Chr11.2 m 2.22 1.15   10 0.363 0.516 0.66, 4.26 -0.45
B6.PWD-Chr11.3 f 1.93 0.914   8 0.323 0.473 1.13, 3.9 -0.51
B6.PWD-Chr11.3 m 1.97 0.679   10 0.215 0.345 0.86, 3.27 -0.74
B6.PWD-Chr12 f 1.96 0.727   8 0.257 0.371 1.08, 3.09 -0.49
B6.PWD-Chr12 m 3.26 1.91   8 0.674 0.586 1.72, 7.04 0.76
B6.PWD-Chr13 f 1.41 0.718   8 0.254 0.51 0.55, 2.82 -0.89
B6.PWD-Chr13 m 1.84 0.748   9 0.249 0.405 1.01, 3.5 -0.89
B6.PWD-Chr14 f 1.92 0.889   8 0.314 0.462 0.41, 2.76 -0.52
B6.PWD-Chr14 m 2.03 0.336   10 0.106 0.166 1.47, 2.58 -0.67
B6.PWD-Chr15 f 2.87 0.93   7 0.351 0.323 1.17, 3.9 0.17
B6.PWD-Chr15 m 2.59 1.17   8 0.414 0.452 1.03, 3.72 -0.02
B6.PWD-Chr16 f 2.51 0.629   8 0.222 0.251 1.56, 3.77 -0.09
B6.PWD-Chr16 m 2.51 0.445   8 0.157 0.177 1.61, 3.05 -0.11
B6.PWD-Chr17 f 2.3 0.514   8 0.182 0.224 1.91, 3.53 -0.24
B6.PWD-Chr17 m 4.31 1.57   8 0.556 0.365 2.79, 7.51 1.99
B6.PWD-Chr18 f 1.51 0.701   8 0.248 0.464 0.56, 2.63 -0.82
B6.PWD-Chr18 m 1.31 0.404   8 0.143 0.309 0.61, 1.71 -1.51
B6.PWD-Chr19 f 1.93 0.393   8 0.139 0.203 1.15, 2.3 -0.51
B6.PWD-Chr19 m 2.45 0.292   7 0.11 0.119 2.11, 2.96 -0.18
B6.PWD-Chr2 f 3.07 0.937   10 0.296 0.306 1.73, 5.39 0.32
B6.PWD-Chr2 m 2.53 0.616   8 0.218 0.244 1.95, 3.88 -0.09
B6.PWD-Chr3 f 4.72 1.14   8 0.402 0.241 3.18, 6.29 1.52
B6.PWD-Chr3 m 2.21 0.492   8 0.174 0.222 1.65, 2.92 -0.46
B6.PWD-Chr5 f 2.38 0.766   8 0.271 0.322 1.45, 3.51 -0.19
B6.PWD-Chr5 m 2.05 1.12   8 0.398 0.549 0.33, 3.35 -0.65
B6.PWD-Chr6 f 8.59 3.15   8 1.12 0.367 5.12, 14.0 4.33
B6.PWD-Chr6 m 5.28 2.07   8 0.731 0.391 0.88, 7.26 3.12
B6.PWD-Chr8 f 1.83 0.662   5 0.296 0.361 0.95, 2.64 -0.58
B6.PWD-Chr8 m 2.07 0.716   5 0.32 0.347 0.93, 2.88 -0.62
B6.PWD-Chr9 f 3.27 2.48   8 0.876 0.757 0.44, 7.88 0.46
B6.PWD-Chr9 m 3.01 1.52   8 0.538 0.504 1.53, 5.6 0.47
B6.PWD-ChrX.1 f 1.65 0.724   8 0.256 0.439 0.13, 2.49 -0.72
B6.PWD-ChrX.1 m 1.73 0.386   7 0.146 0.223 1.34, 2.49 -1.02
B6.PWD-ChrX.2 f 2.34 1.11   8 0.393 0.475 1.04, 4.27 -0.21
B6.PWD-ChrX.2 m 3.13 0.707   9 0.236 0.226 1.89, 3.96 0.61
B6.PWD-ChrX.3 f 3.87 1.97   8 0.695 0.508 1.6, 6.88 0.9
B6.PWD-ChrX.3 m 3.79 1.39   8 0.492 0.368 1.86, 5.53 1.38
B6.PWD-ChrY f 2.68 0.848   8 0.3 0.317 1.61, 3.94 0.03
B6.PWD-ChrY m 2.88 0.769   8 0.272 0.267 1.54, 3.9 0.32
B6.PWD-mt f 2.31 0.633   7 0.239 0.274 1.4, 3.11 -0.24
B6.PWD-mt m 3.11 0.569   8 0.201 0.183 2.22, 3.9 0.59
C57BL/6J f 2.26 0.859   16 0.215 0.38 0.86, 3.74 -0.27
C57BL/6J m 1.91 0.562   16 0.14 0.295 0.75, 2.92 -0.81
PWD/PhJ f 1.83 0.59   7 0.223 0.323 0.99, 2.66 -0.58
PWD/PhJ m 1.72 0.33   8 0.117 0.192 1.28, 2.3 -1.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 2.8413 0.3776 3.5835 2.099
B6.PWD-Chr1 m 3.1413 0.3776 3.8835 2.399
B6.PWD-Chr10.1 f 3.0364 0.322 3.6694 2.4033
B6.PWD-Chr10.1 m 2.635 0.3776 3.3773 1.8927
B6.PWD-Chr10.2 f 2.2475 0.3776 2.9898 1.5052
B6.PWD-Chr10.2 m 2.2588 0.3776 3.001 1.5165
B6.PWD-Chr10.3 f 2.7662 0.3776 3.5085 2.024
B6.PWD-Chr10.3 m 3.1162 0.3776 3.8585 2.374
B6.PWD-Chr11.1 f 2.0642 0.3083 2.6702 1.4581
B6.PWD-Chr11.1 m 1.8683 0.3083 2.4744 1.2623
B6.PWD-Chr11.2 f 1.6667 0.356 2.3665 0.9668
B6.PWD-Chr11.2 m 2.223 0.3378 2.8869 1.5591
B6.PWD-Chr11.3 f 1.9325 0.3776 2.6748 1.1902
B6.PWD-Chr11.3 m 1.967 0.3378 2.6309 1.3031
B6.PWD-Chr12 f 1.9587 0.3776 2.701 1.2165
B6.PWD-Chr12 m 3.2575 0.3776 3.9998 2.5152
B6.PWD-Chr13 f 1.4063 0.3776 2.1485 0.664
B6.PWD-Chr13 m 1.8444 0.356 2.5443 1.1446
B6.PWD-Chr14 f 1.9237 0.3776 2.666 1.1815
B6.PWD-Chr14 m 2.027 0.3378 2.6909 1.3631
B6.PWD-Chr15 f 2.8743 0.4037 3.6678 2.0808
B6.PWD-Chr15 m 2.5887 0.3776 3.331 1.8465
B6.PWD-Chr16 f 2.5075 0.3776 3.2498 1.7652
B6.PWD-Chr16 m 2.5087 0.3776 3.251 1.7665
B6.PWD-Chr17 f 2.3 0.3776 3.0423 1.5577
B6.PWD-Chr17 m 4.3113 0.3776 5.0535 3.569
B6.PWD-Chr18 f 1.5112 0.3776 2.2535 0.769
B6.PWD-Chr18 m 1.3087 0.3776 2.051 0.5665
B6.PWD-Chr19 f 1.9325 0.3776 2.6748 1.1902
B6.PWD-Chr19 m 2.4514 0.4037 3.245 1.6579
B6.PWD-Chr2 f 3.066 0.3378 3.7299 2.4021
B6.PWD-Chr2 m 2.5287 0.3776 3.271 1.7865
B6.PWD-Chr3 f 4.7238 0.3776 5.466 3.9815
B6.PWD-Chr3 m 2.21 0.3776 2.9523 1.4677
B6.PWD-Chr5 f 2.3762 0.3776 3.1185 1.634
B6.PWD-Chr5 m 2.0488 0.3776 2.791 1.3065
B6.PWD-Chr6 f 8.5912 0.3776 9.3335 7.849
B6.PWD-Chr6 m 5.2825 0.3776 6.0248 4.5402
B6.PWD-Chr8 f 1.834 0.4777 2.7729 0.8951
B6.PWD-Chr8 m 2.066 0.4777 3.0049 1.1271
B6.PWD-Chr9 f 3.2737 0.3776 4.016 2.5315
B6.PWD-Chr9 m 3.015 0.3776 3.7573 2.2727
B6.PWD-ChrX.1 f 1.6513 0.3776 2.3935 0.909
B6.PWD-ChrX.1 m 1.7314 0.4037 2.525 0.9379
B6.PWD-ChrX.2 f 2.3362 0.3776 3.0785 1.594
B6.PWD-ChrX.2 m 3.1333 0.356 3.8332 2.4335
B6.PWD-ChrX.3 f 3.8713 0.3776 4.6135 3.129
B6.PWD-ChrX.3 m 3.785 0.3776 4.5273 3.0427
B6.PWD-ChrY f 2.675 0.3776 3.4173 1.9327
B6.PWD-ChrY m 2.8775 0.3776 3.6198 2.1352
B6.PWD-mt f 2.31 0.4037 3.1035 1.5165
B6.PWD-mt m 3.1062 0.3776 3.8485 2.364
C57BL/6J f 2.2613 0.267 2.7861 1.7364
C57BL/6J m 1.9056 0.267 2.4305 1.3808
PWD/PhJ f 1.8286 0.4037 2.6221 1.035
PWD/PhJ m 1.7187 0.3776 2.461 0.9765


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 2.9913 0.267 3.5161 2.4664
B6.PWD-Chr10.1 both 2.8357 0.2482 3.3235 2.3479
B6.PWD-Chr10.2 both 2.2531 0.267 2.778 1.7283
B6.PWD-Chr10.3 both 2.9412 0.267 3.4661 2.4164
B6.PWD-Chr11.1 both 1.9662 0.218 2.3948 1.5377
B6.PWD-Chr11.2 both 1.9448 0.2454 2.4272 1.4625
B6.PWD-Chr11.3 both 1.9497 0.2533 2.4477 1.4518
B6.PWD-Chr12 both 2.6081 0.267 3.133 2.0833
B6.PWD-Chr13 both 1.6253 0.2595 2.1354 1.1153
B6.PWD-Chr14 both 1.9754 0.2533 2.4733 1.4774
B6.PWD-Chr15 both 2.7315 0.2764 3.2748 2.1882
B6.PWD-Chr16 both 2.5081 0.267 3.033 1.9833
B6.PWD-Chr17 both 3.3056 0.267 3.8305 2.7808
B6.PWD-Chr18 both 1.41 0.267 1.9349 0.8851
B6.PWD-Chr19 both 2.192 0.2764 2.7353 1.6487
B6.PWD-Chr2 both 2.7974 0.2533 3.2953 2.2994
B6.PWD-Chr3 both 3.4669 0.267 3.9917 2.942
B6.PWD-Chr5 both 2.2125 0.267 2.7374 1.6876
B6.PWD-Chr6 both 6.9369 0.267 7.4617 6.412
B6.PWD-Chr8 both 1.95 0.3378 2.6139 1.2861
B6.PWD-Chr9 both 3.1444 0.267 3.6692 2.6195
B6.PWD-ChrX.1 both 1.6913 0.2764 2.2346 1.148
B6.PWD-ChrX.2 both 2.7348 0.2595 3.2449 2.2247
B6.PWD-ChrX.3 both 3.8281 0.267 4.353 3.3033
B6.PWD-ChrY both 2.7762 0.267 3.3011 2.2514
B6.PWD-mt both 2.7081 0.2764 3.2514 2.1648
C57BL/6J both 2.0834 0.1888 2.4546 1.7123
PWD/PhJ both 1.7737 0.2764 2.317 1.2304




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA