Project measure / variable:   Donahue5   pct_NK_mature

ID, description, units MPD:41408   pct_NK_mature   mature natural killer (NK) cells (percentage of viable WBC)   [%]  
Data set, strains Donahue5   B6.A consomic w/par   22 strains     sex: both     age: 7wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Donahue5 - mature natural killer (NK) cells (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested22 strains22 strains
Mean of the strain means4.73   % 4.41   %
Median of the strain means4.47   % 4.17   %
SD of the strain means± 1.93 ± 1.66
Coefficient of variation (CV)0.407 0.376
Min–max range of strain means1.43   –   8.55   % 1.41   –   7.88   %
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.6314 11.6314 7.1476 0.0079
strain 21 1167.9082 55.6147 34.1757 < 0.0001
sex:strain 21 43.7792 2.0847 1.2811 0.1842
Residuals 341 554.9156 1.6273


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 2.01 0.634   16 0.159 0.316 1.2, 3.12 -1.41
A/J m 1.41 0.468   16 0.117 0.332 0.794, 2.55 -1.81
B6.A-Chr1 f 4.21 0.493   8 0.174 0.117 3.24, 4.93 -0.27
B6.A-Chr1 m 3.93 0.76   8 0.269 0.193 2.87, 5.15 -0.29
B6.A-Chr10 f 6.96 1.15   8 0.408 0.166 5.57, 9.02 1.16
B6.A-Chr10 m 6.29 2.25   8 0.795 0.357 4.03, 11.5 1.13
B6.A-Chr11 f 4.67 1.07   8 0.377 0.229 3.96, 7.22 -0.03
B6.A-Chr11 m 4.21 0.766   8 0.271 0.182 2.65, 4.85 -0.12
B6.A-Chr12 f 4.02 0.734   8 0.259 0.182 3.33, 5.23 -0.37
B6.A-Chr12 m 4.34 0.913   8 0.323 0.211 3.51, 6.26 -0.04
B6.A-Chr13 f 7.61 1.62   8 0.572 0.213 5.51, 9.81 1.49
B6.A-Chr13 m 7.12 1.2   8 0.424 0.168 5.28, 8.53 1.63
B6.A-Chr14 f 3.36 1.43   8 0.507 0.427 1.66, 5.1 -0.71
B6.A-Chr14 m 3.0 0.837   8 0.296 0.279 1.85, 3.98 -0.85
B6.A-Chr15 f 4.2 1.78   8 0.629 0.424 0.66, 6.86 -0.28
B6.A-Chr15 m 4.99 0.993   8 0.351 0.199 3.68, 6.78 0.35
B6.A-Chr16 f 7.16 3.36   8 1.19 0.47 3.55, 11.3 1.26
B6.A-Chr16 m 4.73 2.31   8 0.815 0.488 2.39, 8.41 0.19
B6.A-Chr17 f 1.55 0.514   8 0.182 0.332 0.65, 2.48 -1.65
B6.A-Chr17 m 2.23 1.09   8 0.385 0.488 1.16, 4.37 -1.32
B6.A-Chr18 f 4.33 1.0   8 0.354 0.231 3.37, 6.35 -0.21
B6.A-Chr18 m 3.82 1.29   8 0.456 0.338 2.38, 6.25 -0.36
B6.A-Chr19 f 5.18 1.25   8 0.442 0.241 3.12, 7.0 0.23
B6.A-Chr19 m 5.5 1.51   8 0.533 0.274 2.96, 7.53 0.66
B6.A-Chr2 f 4.62 1.03   9 0.344 0.224 2.95, 6.01 -0.06
B6.A-Chr2 m 3.94 0.661   8 0.234 0.168 2.97, 4.77 -0.28
B6.A-Chr3 f 5.14 1.91   8 0.675 0.371 3.28, 8.87 0.21
B6.A-Chr3 m 4.54 0.968   8 0.342 0.213 3.36, 5.97 0.08
B6.A-Chr4 f 4.3 0.53   8 0.187 0.123 3.55, 5.23 -0.22
B6.A-Chr4 m 3.86 0.667   8 0.236 0.173 2.5, 4.73 -0.33
B6.A-Chr5 f 3.51 1.05   8 0.372 0.3 2.22, 5.43 -0.63
B6.A-Chr5 m 4.51 0.758   8 0.268 0.168 3.36, 5.86 0.06
B6.A-Chr6 f 1.43 0.309   8 0.109 0.216 0.874, 1.72 -1.71
B6.A-Chr6 m 1.8 1.21   8 0.428 0.672 0.73, 4.62 -1.58
B6.A-Chr7 f 7.87 2.14   8 0.756 0.272 4.96, 12.4 1.63
B6.A-Chr7 m 7.3 1.57   8 0.554 0.215 5.28, 9.81 1.74
B6.A-Chr8 f 3.86 1.07   8 0.379 0.278 1.94, 5.13 -0.45
B6.A-Chr8 m 3.49 0.797   8 0.282 0.228 2.66, 5.05 -0.56
B6.A-Chr9 f 4.78 1.47   8 0.518 0.307 2.58, 6.79 0.02
B6.A-Chr9 m 4.12 0.784   8 0.277 0.19 3.48, 5.86 -0.18
B6.A-ChrX f 8.55 2.1   8 0.742 0.246 5.59, 11.9 1.98
B6.A-ChrX m 7.88 1.72   8 0.609 0.219 5.24, 10.3 2.09
C57BL/6J f 4.79 0.903   16 0.226 0.188 3.2, 7.14 0.03
C57BL/6J m 4.06 0.74   16 0.185 0.182 2.77, 5.47 -0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 2.006 0.3189 2.6333 1.3787
A/J m 1.4114 0.3189 2.0387 0.7841
B6.A-Chr1 f 4.2088 0.451 5.0959 3.3216
B6.A-Chr1 m 3.9313 0.451 4.8184 3.0441
B6.A-Chr10 f 6.9588 0.451 7.8459 6.0716
B6.A-Chr10 m 6.2938 0.451 7.1809 5.4066
B6.A-Chr11 f 4.6688 0.451 5.5559 3.7816
B6.A-Chr11 m 4.205 0.451 5.0921 3.3179
B6.A-Chr12 f 4.0237 0.451 4.9109 3.1366
B6.A-Chr12 m 4.3362 0.451 5.2234 3.4491
B6.A-Chr13 f 7.61 0.451 8.4971 6.7229
B6.A-Chr13 m 7.125 0.451 8.0121 6.2379
B6.A-Chr14 f 3.36 0.451 4.2471 2.4729
B6.A-Chr14 m 3.0 0.451 3.8871 2.1129
B6.A-Chr15 f 4.2013 0.451 5.0884 3.3141
B6.A-Chr15 m 4.9925 0.451 5.8796 4.1054
B6.A-Chr16 f 7.1637 0.451 8.0509 6.2766
B6.A-Chr16 m 4.7275 0.451 5.6146 3.8404
B6.A-Chr17 f 1.5488 0.451 2.4359 0.6616
B6.A-Chr17 m 2.23 0.451 3.1171 1.3429
B6.A-Chr18 f 4.33 0.451 5.2171 3.4429
B6.A-Chr18 m 3.8175 0.451 4.7046 2.9304
B6.A-Chr19 f 5.1838 0.451 6.0709 4.2966
B6.A-Chr19 m 5.5 0.451 6.3871 4.6129
B6.A-Chr2 f 4.6167 0.4252 5.4531 3.7803
B6.A-Chr2 m 3.9413 0.451 4.8284 3.0541
B6.A-Chr3 f 5.1413 0.451 6.0284 4.2541
B6.A-Chr3 m 4.5438 0.451 5.4309 3.6566
B6.A-Chr4 f 4.305 0.451 5.1921 3.4179
B6.A-Chr4 m 3.8625 0.451 4.7496 2.9754
B6.A-Chr5 f 3.5075 0.451 4.3946 2.6204
B6.A-Chr5 m 4.51 0.451 5.3971 3.6229
B6.A-Chr6 f 1.4306 0.451 2.3177 0.5435
B6.A-Chr6 m 1.8015 0.451 2.6886 0.9144
B6.A-Chr7 f 7.8712 0.451 8.7584 6.9841
B6.A-Chr7 m 7.3025 0.451 8.1896 6.4154
B6.A-Chr8 f 3.8563 0.451 4.7434 2.9691
B6.A-Chr8 m 3.495 0.451 4.3821 2.6079
B6.A-Chr9 f 4.7775 0.451 5.6646 3.8904
B6.A-Chr9 m 4.1238 0.451 5.0109 3.2366
B6.A-ChrX f 8.5488 0.451 9.4359 7.6616
B6.A-ChrX m 7.875 0.451 8.7621 6.9879
C57BL/6J f 4.7912 0.3189 5.4185 4.164
C57BL/6J m 4.0631 0.3189 4.6904 3.4358


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 1.7087 0.2255 2.1523 1.2651
B6.A-Chr1 both 4.07 0.3189 4.6973 3.4427
B6.A-Chr10 both 6.6263 0.3189 7.2535 5.999
B6.A-Chr11 both 4.4369 0.3189 5.0642 3.8096
B6.A-Chr12 both 4.18 0.3189 4.8073 3.5527
B6.A-Chr13 both 7.3675 0.3189 7.9948 6.7402
B6.A-Chr14 both 3.18 0.3189 3.8073 2.5527
B6.A-Chr15 both 4.5969 0.3189 5.2242 3.9696
B6.A-Chr16 both 5.9456 0.3189 6.5729 5.3183
B6.A-Chr17 both 1.8894 0.3189 2.5167 1.2621
B6.A-Chr18 both 4.0737 0.3189 4.701 3.4465
B6.A-Chr19 both 5.3419 0.3189 5.9692 4.7146
B6.A-Chr2 both 4.279 0.3099 4.8886 3.6693
B6.A-Chr3 both 4.8425 0.3189 5.4698 4.2152
B6.A-Chr4 both 4.0837 0.3189 4.711 3.4565
B6.A-Chr5 both 4.0088 0.3189 4.636 3.3815
B6.A-Chr6 both 1.616 0.3189 2.2433 0.9887
B6.A-Chr7 both 7.5869 0.3189 8.2142 6.9596
B6.A-Chr8 both 3.6756 0.3189 4.3029 3.0483
B6.A-Chr9 both 4.4506 0.3189 5.0779 3.8233
B6.A-ChrX both 8.2119 0.3189 8.8392 7.5846
C57BL/6J both 4.4272 0.2255 4.8707 3.9836




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA