Project measure / variable:   Donahue5   pct_MONO_resident

ID, description, units MPD:41405   pct_MONO_resident   resident monocytes (percentage of viable WBC)   [%]  
Data set, strains Donahue5   B6.A consomic w/par   22 strains     sex: both     age: 7wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Donahue5 - resident monocytes (percentage of viable WBC)

B6.A-Chr3B6.A-ChrXB6.A-Chr13B6.A-Chr11B6.A-Chr19B6.A-Chr6B6.A-Chr1B6.A-Chr10B6.A-Chr12B6.A-Chr14A/JB6.A-Chr18B6.A-Chr16B6.A-Chr8B6.A-Chr15B6.A-Chr5C57BL/6JB6.A-Chr17B6.A-Chr9B6.A-Chr2B6.A-Chr7B6.A-Chr4 % 0.00.20.40.60.81.01.21.41.61.82.02.22.42.6femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested22 strains22 strains
Mean of the strain means0.602   % 0.780   %
Median of the strain means0.557   % 0.837   %
SD of the strain means± 0.366 ± 0.449
Coefficient of variation (CV)0.608 0.576
Min–max range of strain means0.114   –   1.28   % 0.134   –   1.78   %
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.1392 3.1392 25.285 < 0.0001
strain 21 56.4601 2.6886 21.6551 < 0.0001
sex:strain 21 3.3836 0.1611 1.2978 0.1728
Residuals 341 42.3367 0.1242


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 44 (44)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
A/J f 0.502 0.306   16 0.0766 0.609 0.1, 0.91 -0.27
A/J m 0.868 0.614   16 0.154 0.708 0.24, 2.04 0.2
B6.A-Chr1 f 0.745 0.268   8 0.0949 0.36 0.35, 1.2 0.39
B6.A-Chr1 m 1.17 0.31   8 0.11 0.265 0.52, 1.53 0.87
B6.A-Chr10 f 0.834 0.756   8 0.267 0.907 0.21, 2.03 0.63
B6.A-Chr10 m 1.02 0.864   8 0.305 0.848 0.11, 2.17 0.53
B6.A-Chr11 f 0.849 0.194   8 0.0684 0.228 0.51, 1.1 0.67
B6.A-Chr11 m 1.23 0.347   8 0.123 0.281 0.82, 1.9 1.0
B6.A-Chr12 f 0.674 0.226   8 0.0798 0.335 0.34, 1.01 0.2
B6.A-Chr12 m 1.03 0.274   8 0.0967 0.266 0.64, 1.32 0.56
B6.A-Chr13 f 1.27 0.317   8 0.112 0.248 0.93, 1.92 1.82
B6.A-Chr13 m 1.04 0.462   8 0.163 0.442 0.47, 1.88 0.58
B6.A-Chr14 f 0.661 0.314   8 0.111 0.474 0.37, 1.21 0.16
B6.A-Chr14 m 0.851 0.293   8 0.104 0.344 0.44, 1.33 0.16
B6.A-Chr15 f 0.326 0.198   8 0.0701 0.609 0.076, 0.73 -0.76
B6.A-Chr15 m 0.824 0.365   8 0.129 0.443 0.25, 1.45 0.1
B6.A-Chr16 f 0.537 0.186   8 0.0657 0.346 0.25, 0.78 -0.18
B6.A-Chr16 m 0.616 0.313   8 0.111 0.508 0.19, 1.21 -0.36
B6.A-Chr17 f 0.191 0.0679   8 0.024 0.356 0.066, 0.28 -1.12
B6.A-Chr17 m 0.325 0.201   8 0.071 0.618 0.13, 0.75 -1.01
B6.A-Chr18 f 0.568 0.414   8 0.146 0.73 0.21, 1.25 -0.09
B6.A-Chr18 m 0.724 0.56   8 0.198 0.773 0.2, 1.5 -0.12
B6.A-Chr19 f 0.92 0.354   8 0.125 0.385 0.37, 1.31 0.87
B6.A-Chr19 m 1.05 0.367   8 0.13 0.351 0.59, 1.61 0.6
B6.A-Chr2 f 0.196 0.0733   9 0.0244 0.374 0.093, 0.31 -1.11
B6.A-Chr2 m 0.234 0.068   8 0.024 0.291 0.16, 0.32 -1.22
B6.A-Chr3 f 1.17 0.394   8 0.139 0.335 0.69, 1.9 1.55
B6.A-Chr3 m 1.78 0.309   8 0.109 0.174 1.38, 2.11 2.23
B6.A-Chr4 f 0.114 0.037   8 0.0131 0.325 0.069, 0.19 -1.33
B6.A-Chr4 m 0.134 0.0416   8 0.0147 0.31 0.053, 0.19 -1.44
B6.A-Chr5 f 0.275 0.0989   8 0.0349 0.359 0.12, 0.46 -0.89
B6.A-Chr5 m 0.367 0.0665   8 0.0235 0.181 0.24, 0.46 -0.92
B6.A-Chr6 f 0.944 0.59   8 0.209 0.626 0.38, 1.83 0.93
B6.A-Chr6 m 0.986 0.543   8 0.192 0.551 0.46, 1.72 0.46
B6.A-Chr7 f 0.173 0.101   8 0.0357 0.582 0.076, 0.34 -1.17
B6.A-Chr7 m 0.215 0.0542   8 0.0192 0.252 0.16, 0.3 -1.26
B6.A-Chr8 f 0.547 0.277   8 0.0978 0.505 0.31, 1.15 -0.15
B6.A-Chr8 m 0.606 0.361   8 0.128 0.596 0.18, 1.14 -0.39
B6.A-Chr9 f 0.23 0.0687   8 0.0243 0.299 0.08, 0.31 -1.02
B6.A-Chr9 m 0.276 0.0946   8 0.0334 0.342 0.13, 0.43 -1.12
B6.A-ChrX f 1.28 0.52   8 0.184 0.405 0.66, 2.11 1.85
B6.A-ChrX m 1.54 0.449   8 0.159 0.291 1.16, 2.49 1.69
C57BL/6J f 0.246 0.108   16 0.027 0.439 0.054, 0.42 -0.97
C57BL/6J m 0.27 0.103   16 0.0257 0.381 0.095, 0.43 -1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 0.5025 0.0881 0.6758 0.3292
A/J m 0.8681 0.0881 1.0414 0.6949
B6.A-Chr1 f 0.745 0.1246 0.99 0.5
B6.A-Chr1 m 1.1725 0.1246 1.4175 0.9275
B6.A-Chr10 f 0.8337 0.1246 1.0788 0.5887
B6.A-Chr10 m 1.0188 0.1246 1.2638 0.7737
B6.A-Chr11 f 0.8488 0.1246 1.0938 0.6037
B6.A-Chr11 m 1.2313 0.1246 1.4763 0.9862
B6.A-Chr12 f 0.6737 0.1246 0.9188 0.4287
B6.A-Chr12 m 1.0287 0.1246 1.2738 0.7837
B6.A-Chr13 f 1.275 0.1246 1.52 1.03
B6.A-Chr13 m 1.045 0.1246 1.29 0.8
B6.A-Chr14 f 0.6612 0.1246 0.9063 0.4162
B6.A-Chr14 m 0.8513 0.1246 1.0963 0.6062
B6.A-Chr15 f 0.3257 0.1246 0.5708 0.0807
B6.A-Chr15 m 0.8237 0.1246 1.0688 0.5787
B6.A-Chr16 f 0.5375 0.1246 0.7825 0.2925
B6.A-Chr16 m 0.6163 0.1246 0.8613 0.3712
B6.A-Chr17 f 0.1908 0.1246 0.4358 0.0
B6.A-Chr17 m 0.325 0.1246 0.57 0.08
B6.A-Chr18 f 0.5675 0.1246 0.8125 0.3225
B6.A-Chr18 m 0.7237 0.1246 0.9688 0.4787
B6.A-Chr19 f 0.92 0.1246 1.165 0.675
B6.A-Chr19 m 1.0462 0.1246 1.2913 0.8012
B6.A-Chr2 f 0.1959 0.1175 0.4269 0.0
B6.A-Chr2 m 0.2337 0.1246 0.4788 0.0
B6.A-Chr3 f 1.175 0.1246 1.42 0.93
B6.A-Chr3 m 1.7775 0.1246 2.0225 1.5325
B6.A-Chr4 f 0.1139 0.1246 0.3589 0.0
B6.A-Chr4 m 0.1341 0.1246 0.3792 0.0
B6.A-Chr5 f 0.275 0.1246 0.52 0.03
B6.A-Chr5 m 0.3675 0.1246 0.6125 0.1225
B6.A-Chr6 f 0.9437 0.1246 1.1888 0.6987
B6.A-Chr6 m 0.9863 0.1246 1.2313 0.7412
B6.A-Chr7 f 0.1734 0.1246 0.4184 0.0
B6.A-Chr7 m 0.215 0.1246 0.46 0.0
B6.A-Chr8 f 0.5475 0.1246 0.7925 0.3025
B6.A-Chr8 m 0.6062 0.1246 0.8513 0.3612
B6.A-Chr9 f 0.23 0.1246 0.475 0.0
B6.A-Chr9 m 0.2762 0.1246 0.5213 0.0312
B6.A-ChrX f 1.2838 0.1246 1.5288 1.0387
B6.A-ChrX m 1.545 0.1246 1.79 1.3
C57BL/6J f 0.2457 0.0881 0.419 0.0725
C57BL/6J m 0.2697 0.0881 0.443 0.0964


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 0.6853 0.0623 0.8078 0.5628
B6.A-Chr1 both 0.9588 0.0881 1.132 0.7855
B6.A-Chr10 both 0.9263 0.0881 1.0995 0.753
B6.A-Chr11 both 1.04 0.0881 1.2133 0.8667
B6.A-Chr12 both 0.8512 0.0881 1.0245 0.678
B6.A-Chr13 both 1.16 0.0881 1.3333 0.9867
B6.A-Chr14 both 0.7562 0.0881 0.9295 0.583
B6.A-Chr15 both 0.5747 0.0881 0.748 0.4015
B6.A-Chr16 both 0.5769 0.0881 0.7501 0.4036
B6.A-Chr17 both 0.2579 0.0881 0.4311 0.0846
B6.A-Chr18 both 0.6456 0.0881 0.8189 0.4724
B6.A-Chr19 both 0.9831 0.0881 1.1564 0.8099
B6.A-Chr2 both 0.2148 0.0856 0.3832 0.0464
B6.A-Chr3 both 1.4763 0.0881 1.6495 1.303
B6.A-Chr4 both 0.124 0.0881 0.2973 0.0
B6.A-Chr5 both 0.3212 0.0881 0.4945 0.148
B6.A-Chr6 both 0.965 0.0881 1.1383 0.7917
B6.A-Chr7 both 0.1942 0.0881 0.3675 0.0209
B6.A-Chr8 both 0.5769 0.0881 0.7501 0.4036
B6.A-Chr9 both 0.2531 0.0881 0.4264 0.0799
B6.A-ChrX both 1.4144 0.0881 1.5876 1.2411
C57BL/6J both 0.2577 0.0623 0.3802 0.1352




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA