Project measure / variable:   Donahue5   pct_EOS

ID, description, units MPD:41402   pct_EOS   eosinophil differential (percentage of viable WBC)   [%]  
Data set, strains Donahue5   B6.A consomic w/par   22 strains     sex: both     age: 7wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Donahue5 - eosinophil differential (percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested22 strains22 strains
Mean of the strain means2.75   % 2.81   %
Median of the strain means2.47   % 2.92   %
SD of the strain means± 0.751 ± 0.681
Coefficient of variation (CV)0.273 0.242
Min–max range of strain means1.87   –   4.10   % 1.54   –   4.26   %
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0521 0.0521 0.046 0.8304
strain 21 170.012 8.0958 7.1387 < 0.0001
sex:strain 21 27.8961 1.3284 1.1713 0.2738
Residuals 341 386.7181 1.1341


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 1.92 0.6   16 0.15 0.312 1.26, 3.24 -1.11
A/J m 1.54 0.317   16 0.0793 0.206 1.04, 1.98 -1.87
B6.A-Chr1 f 2.48 0.842   8 0.298 0.34 1.21, 3.71 -0.37
B6.A-Chr1 m 2.93 0.825   8 0.292 0.281 1.88, 4.08 0.17
B6.A-Chr10 f 3.91 2.18   8 0.769 0.556 2.13, 7.83 1.54
B6.A-Chr10 m 3.44 1.16   8 0.409 0.337 1.59, 4.54 0.92
B6.A-Chr11 f 2.46 1.33   8 0.469 0.538 0.79, 4.27 -0.39
B6.A-Chr11 m 3.64 2.31   8 0.818 0.635 1.68, 8.81 1.22
B6.A-Chr12 f 2.82 1.34   8 0.473 0.474 1.31, 5.12 0.09
B6.A-Chr12 m 3.95 1.64   8 0.58 0.415 2.46, 7.71 1.67
B6.A-Chr13 f 3.28 0.94   8 0.332 0.286 1.91, 5.06 0.7
B6.A-Chr13 m 2.99 0.352   8 0.125 0.118 2.25, 3.42 0.26
B6.A-Chr14 f 2.34 0.985   8 0.348 0.421 1.12, 4.31 -0.55
B6.A-Chr14 m 2.35 0.33   8 0.117 0.141 1.75, 2.84 -0.68
B6.A-Chr15 f 1.88 0.582   8 0.206 0.31 0.57, 2.36 -1.16
B6.A-Chr15 m 2.67 0.478   8 0.169 0.179 2.25, 3.46 -0.21
B6.A-Chr16 f 3.06 1.18   8 0.416 0.384 1.7, 4.71 0.41
B6.A-Chr16 m 2.39 0.677   8 0.239 0.284 0.85, 3.03 -0.62
B6.A-Chr17 f 2.2 0.853   8 0.302 0.387 1.09, 4.02 -0.74
B6.A-Chr17 m 2.19 0.471   8 0.166 0.215 1.49, 2.8 -0.91
B6.A-Chr18 f 2.34 0.62   8 0.219 0.265 1.69, 3.56 -0.55
B6.A-Chr18 m 2.25 0.497   8 0.176 0.22 1.19, 2.74 -0.83
B6.A-Chr19 f 1.93 0.844   8 0.298 0.438 0.92, 3.01 -1.1
B6.A-Chr19 m 2.92 1.23   8 0.437 0.423 1.15, 4.97 0.16
B6.A-Chr2 f 2.21 0.634   9 0.211 0.286 1.32, 3.23 -0.73
B6.A-Chr2 m 2.19 0.516   8 0.182 0.236 1.04, 2.68 -0.91
B6.A-Chr3 f 4.1 1.32   8 0.468 0.322 1.69, 5.4 1.79
B6.A-Chr3 m 4.26 1.94   8 0.685 0.455 2.05, 7.99 2.13
B6.A-Chr4 f 3.19 1.02   8 0.361 0.32 1.55, 4.28 0.58
B6.A-Chr4 m 2.96 0.773   8 0.273 0.261 1.76, 4.31 0.22
B6.A-Chr5 f 2.03 0.431   8 0.152 0.212 1.37, 2.58 -0.97
B6.A-Chr5 m 2.34 0.404   8 0.143 0.173 1.6, 2.75 -0.69
B6.A-Chr6 f 1.87 0.42   8 0.149 0.225 1.15, 2.39 -1.18
B6.A-Chr6 m 2.2 0.509   8 0.18 0.232 1.54, 3.1 -0.9
B6.A-Chr7 f 3.77 1.84   8 0.652 0.489 0.79, 6.03 1.35
B6.A-Chr7 m 3.28 1.17   8 0.415 0.357 1.44, 5.24 0.69
B6.A-Chr8 f 4.08 2.17   8 0.769 0.533 1.62, 8.51 1.77
B6.A-Chr8 m 3.29 1.14   8 0.404 0.347 1.48, 5.38 0.7
B6.A-Chr9 f 3.43 1.38   8 0.49 0.403 1.31, 5.41 0.9
B6.A-Chr9 m 3.25 1.16   8 0.412 0.358 1.26, 4.92 0.64
B6.A-ChrX f 3.04 1.0   8 0.353 0.329 1.59, 4.67 0.38
B6.A-ChrX m 2.93 0.95   8 0.336 0.325 1.25, 4.4 0.17
C57BL/6J f 2.26 0.859   16 0.215 0.38 0.86, 3.74 -0.66
C57BL/6J m 1.91 0.562   16 0.14 0.295 0.75, 2.92 -1.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 1.9212 0.2662 2.4449 1.3976
A/J m 1.5419 0.2662 2.0655 1.0182
B6.A-Chr1 f 2.4788 0.3765 3.2193 1.7382
B6.A-Chr1 m 2.9325 0.3765 3.6731 2.1919
B6.A-Chr10 f 3.9138 0.3765 4.6543 3.1732
B6.A-Chr10 m 3.4363 0.3765 4.1768 2.6957
B6.A-Chr11 f 2.4625 0.3765 3.2031 1.7219
B6.A-Chr11 m 3.64 0.3765 4.3806 2.8994
B6.A-Chr12 f 2.8225 0.3765 3.5631 2.0819
B6.A-Chr12 m 3.9525 0.3765 4.6931 3.2119
B6.A-Chr13 f 3.2825 0.3765 4.0231 2.5419
B6.A-Chr13 m 2.9938 0.3765 3.7343 2.2532
B6.A-Chr14 f 2.3413 0.3765 3.0818 1.6007
B6.A-Chr14 m 2.3488 0.3765 3.0893 1.6082
B6.A-Chr15 f 1.8775 0.3765 2.6181 1.1369
B6.A-Chr15 m 2.6662 0.3765 3.4068 1.9257
B6.A-Chr16 f 3.0637 0.3765 3.8043 2.3232
B6.A-Chr16 m 2.3887 0.3765 3.1293 1.6482
B6.A-Chr17 f 2.2037 0.3765 2.9443 1.4632
B6.A-Chr17 m 2.1925 0.3765 2.9331 1.4519
B6.A-Chr18 f 2.3412 0.3765 3.0818 1.6007
B6.A-Chr18 m 2.2537 0.3765 2.9943 1.5132
B6.A-Chr19 f 1.9275 0.3765 2.6681 1.1869
B6.A-Chr19 m 2.9213 0.3765 3.6618 2.1807
B6.A-Chr2 f 2.2144 0.355 2.9127 1.5162
B6.A-Chr2 m 2.1862 0.3765 2.9268 1.4457
B6.A-Chr3 f 4.1038 0.3765 4.8443 3.3632
B6.A-Chr3 m 4.2575 0.3765 4.9981 3.5169
B6.A-Chr4 f 3.1925 0.3765 3.9331 2.4519
B6.A-Chr4 m 2.96 0.3765 3.7006 2.2194
B6.A-Chr5 f 2.0325 0.3765 2.7731 1.2919
B6.A-Chr5 m 2.34 0.3765 3.0806 1.5994
B6.A-Chr6 f 1.8687 0.3765 2.6093 1.1282
B6.A-Chr6 m 2.1975 0.3765 2.9381 1.4569
B6.A-Chr7 f 3.7712 0.3765 4.5118 3.0307
B6.A-Chr7 m 3.28 0.3765 4.0206 2.5394
B6.A-Chr8 f 4.08 0.3765 4.8206 3.3394
B6.A-Chr8 m 3.2912 0.3765 4.0318 2.5507
B6.A-Chr9 f 3.4338 0.3765 4.1743 2.6932
B6.A-Chr9 m 3.2538 0.3765 3.9943 2.5132
B6.A-ChrX f 3.0388 0.3765 3.7793 2.2982
B6.A-ChrX m 2.9263 0.3765 3.6668 2.1857
C57BL/6J f 2.2612 0.2662 2.7849 1.7376
C57BL/6J m 1.9056 0.2662 2.4293 1.382


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 1.7316 0.1883 2.1018 1.3613
B6.A-Chr1 both 2.7056 0.2662 3.2293 2.182
B6.A-Chr10 both 3.675 0.2662 4.1987 3.1513
B6.A-Chr11 both 3.0513 0.2662 3.5749 2.5276
B6.A-Chr12 both 3.3875 0.2662 3.9112 2.8638
B6.A-Chr13 both 3.1381 0.2662 3.6618 2.6145
B6.A-Chr14 both 2.345 0.2662 2.8687 1.8213
B6.A-Chr15 both 2.2719 0.2662 2.7955 1.7482
B6.A-Chr16 both 2.7262 0.2662 3.2499 2.2026
B6.A-Chr17 both 2.1981 0.2662 2.7218 1.6745
B6.A-Chr18 both 2.2975 0.2662 2.8212 1.7738
B6.A-Chr19 both 2.4244 0.2662 2.948 1.9007
B6.A-Chr2 both 2.2003 0.2587 2.7093 1.6914
B6.A-Chr3 both 4.1806 0.2662 4.7043 3.657
B6.A-Chr4 both 3.0762 0.2662 3.5999 2.5526
B6.A-Chr5 both 2.1862 0.2662 2.7099 1.6626
B6.A-Chr6 both 2.0331 0.2662 2.5568 1.5095
B6.A-Chr7 both 3.5256 0.2662 4.0493 3.002
B6.A-Chr8 both 3.6856 0.2662 4.2093 3.162
B6.A-Chr9 both 3.3438 0.2662 3.8674 2.8201
B6.A-ChrX both 2.9825 0.2662 3.5062 2.4588
C57BL/6J both 2.0834 0.1883 2.4537 1.7132




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA