Phenotype measure:   Mitchell1   go_latency



  STRAIN COMPARISON PLOT
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Mitchell1 - latency to respond to Go cue



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested15 strains
Mean of the strain means2.26   s
Median of the strain means2.30   s
SD of the strain means± 0.245
Coefficient of variation (CV)0.109
Min–max range of strain means1.75   –   2.62   s
Mean sample size per strain8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 7.3645 0.526 3.9994 < 0.0001
Residuals 113 14.8627 0.1315


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 2.11 0.494   8 0.175 0.233 1.31, 2.76 -0.6
A/HeJ m 2.04 0.422   10 0.134 0.207 1.45, 2.54 -0.88
AKR/J m 2.17 0.357   8 0.126 0.165 1.65, 2.72 -0.35
BALB/cJ m 1.75 0.502   9 0.167 0.286 1.24, 2.57 -2.07
C3H/HeJ m 2.45 0.317   8 0.112 0.129 2.04, 2.88 0.79
C57BL/6J m 2.62 0.297   8 0.105 0.114 2.18, 3.15 1.48
C57L/J m 2.05 0.256   8 0.0905 0.125 1.76, 2.39 -0.84
C58/J m 1.95 0.373   8 0.132 0.191 1.54, 2.55 -1.25
CBA/J m 2.5 0.211   8 0.0747 0.0846 2.14, 2.77 0.99
DBA/1J m 2.39 0.253   8 0.0896 0.106 1.91, 2.63 0.54
DBA/2J m 2.38 0.201   8 0.0712 0.0846 2.11, 2.66 0.5
NZB/BlNJ m 2.56 0.451   11 0.136 0.176 1.87, 3.42 1.24
PL/J m 2.37 0.13   10 0.0412 0.0549 2.19, 2.62 0.46
SJL/J m 2.3 0.482   8 0.171 0.21 1.31, 3.07 0.18
SWR/J m 2.21 0.383   8 0.135 0.173 1.59, 2.66 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 2.115 0.1282 2.369 1.861
A/HeJ m 2.036 0.1147 2.2632 1.8088
AKR/J m 2.1712 0.1282 2.4253 1.9172
BALB/cJ m 1.7522 0.1209 1.9917 1.5127
C3H/HeJ m 2.4525 0.1282 2.7065 2.1985
C57BL/6J m 2.6187 0.1282 2.8728 2.3647
C57L/J m 2.0512 0.1282 2.3053 1.7972
C58/J m 1.9475 0.1282 2.2015 1.6935
CBA/J m 2.4962 0.1282 2.7503 2.2422
DBA/1J m 2.3862 0.1282 2.6403 2.1322
DBA/2J m 2.38 0.1282 2.634 2.126
NZB/BlNJ m 2.5618 0.1093 2.7785 2.3452
PL/J m 2.374 0.1147 2.6012 2.1468
SJL/J m 2.2975 0.1282 2.5515 2.0435
SWR/J m 2.2062 0.1282 2.4603 1.9522




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.