Project measure / variable:   Lightfoot1   age

ID, description, units MPD:35780   age   age at testing (local parameter)   [d]  
Data set, strains Lightfoot1   inbred   41 strains     sex: both
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Lightfoot1 - age at testing (local parameter)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested41 strains41 strains
Mean of the strain means71.4   d 68.4   d
Median of the strain means64.0   d 63.0   d
SD of the strain means± 13.0 ± 8.94
Coefficient of variation (CV)0.182 0.131
Min–max range of strain means58.0   –   106   d 60.0   –   99.0   d
Mean sample size per strain4.7   mice 5.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2615.7296 2615.7296 82.3193 < 0.0001
strain 40 53028.6268 1325.7157 41.7214 < 0.0001
sex:strain 40 7143.1146 178.5779 5.62 < 0.0001
Residuals 366 11629.8058 31.7754


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.72
129S1/SvImJ m 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.71
129T2/SvEmsJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
129T2/SvEmsJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
129X1/SvJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
129X1/SvJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
A/J f 87.2 3.5   4 1.75 0.0401 82.0, 89.0 1.21
A/J m 72.0 0.0   5 0.0 0.0 72.0, 72.0 0.41
AKR/J f 89.0 0.0   5 0.0 0.0 89.0, 89.0 1.35
AKR/J m 72.0 0.0   5 0.0 0.0 72.0, 72.0 0.41
BALB/cByJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
BALB/cByJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
BALB/cJ f 106.0 12.2   15 3.15 0.115 89.0, 114.0 2.66
BALB/cJ m 99.0 20.9   14 5.58 0.211 72.0, 114.0 3.43
BTBR T+ Itpr3tf/J f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
BTBR T+ Itpr3tf/J m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
BUB/BnJ f 64.0 0.0   3 0.0 0.0 64.0, 64.0 -0.57
BUB/BnJ m 61.0 0.0   3 0.0 0.0 61.0, 61.0 -0.82
C3HeB/FeJ f 89.0 0.0   5 0.0 0.0 89.0, 89.0 1.35
C3HeB/FeJ m 71.0 0.0   5 0.0 0.0 71.0, 71.0 0.29
C3H/HeJ f 84.8 3.83   5 1.71 0.0452 82.0, 89.0 1.03
C3H/HeJ m 63.0 0.0   23 0.0 0.0 63.0, 63.0 -0.6
C57BL/10J f 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.72
C57BL/10J m 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.71
C57BL/6J f 72.0 6.59   28 1.24 0.0915 69.0, 87.0 0.05
C57BL/6J m 67.8 2.63   36 0.438 0.0388 63.0, 70.0 -0.06
C57BLKS/J f 63.0 0.0   5 0.0 0.0 63.0, 63.0 -0.65
C57BLKS/J m 63.0 0.0   5 0.0 0.0 63.0, 63.0 -0.6
C57BR/cdJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
C57BR/cdJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
C57L/J f 73.3 12.0   11 3.61 0.163 63.0, 87.0 0.15
C57L/J m 65.2 6.49   16 1.62 0.0996 56.0, 82.0 -0.35
C58/J f 59.0 0.0   3 0.0 0.0 59.0, 59.0 -0.95
C58/J m 72.0 0.0   3 0.0 0.0 72.0, 72.0 0.41
CAST/EiJ f 66.0 3.16   10 1.0 0.0479 63.0, 69.0 -0.41
CAST/EiJ m 66.0 3.16   10 1.0 0.0479 63.0, 69.0 -0.26
CBA/J f 96.0 0.0   5 0.0 0.0 96.0, 96.0 1.89
CBA/J m 71.0 0.0   5 0.0 0.0 71.0, 71.0 0.29
CE/J f 68.0 0.0   5 0.0 0.0 68.0, 68.0 -0.26
CE/J m 68.0 0.0   5 0.0 0.0 68.0, 68.0 -0.04
DBA/1J f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
DBA/1J m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
DBA/2J f 89.0 0.0   5 0.0 0.0 89.0, 89.0 1.35
DBA/2J m 72.0 0.0   5 0.0 0.0 72.0, 72.0 0.41
FVB/NJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
FVB/NJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
I/LnJ f 58.0 0.0   3 0.0 0.0 58.0, 58.0 -1.03
I/LnJ m 84.0 0.0   2   0.0 0.0 84.0, 84.0 1.75
KK/HlJ f 77.0 0.0   3 0.0 0.0 77.0, 77.0 0.43
KK/HlJ m 77.0 0.0   3 0.0 0.0 77.0, 77.0 0.97
LG/J f 65.0 0.0   3 0.0 0.0 65.0, 65.0 -0.49
LG/J m 65.0 0.0   3 0.0 0.0 65.0, 65.0 -0.38
LP/J f 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.72
LP/J m 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.71
MOLF/EiJ f 73.0 0.0   2   0.0 0.0 73.0, 73.0 0.12
MOLF/EiJ m 73.0 0.0   2   0.0 0.0 73.0, 73.0 0.52
MRL/MpJ f 70.0 0.0   5 0.0 0.0 70.0, 70.0 -0.11
MRL/MpJ m 71.0 0.0   4 0.0 0.0 71.0, 71.0 0.29
NOD/ShiLtJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
NOD/ShiLtJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
NON/ShiLtJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
NON/ShiLtJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
NZB/BlNJ f 65.5 3.69   10 1.17 0.0563 62.0, 69.0 -0.45
NZB/BlNJ m 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.71
NZW/LacJ f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
NZW/LacJ m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
PL/J f 63.0 0.0   5 0.0 0.0 63.0, 63.0 -0.65
PL/J m 63.0 0.0   5 0.0 0.0 63.0, 63.0 -0.6
PWD/PhJ f 104.0 0.0   3 0.0 0.0 104.0, 104.0 2.51
PWD/PhJ m 91.0 0.0   3 0.0 0.0 91.0, 91.0 2.53
RIIIS/J f 60.0 0.0   3 0.0 0.0 60.0, 60.0 -0.88
RIIIS/J m 60.0 0.0   3 0.0 0.0 60.0, 60.0 -0.94
SJL/J f 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.65
SJL/J m 63.0 0.0   3 0.0 0.0 63.0, 63.0 -0.6
SM/J f 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.72
SM/J m 62.0 0.0   5 0.0 0.0 62.0, 62.0 -0.71
SPRET/EiJ f 67.4 0.548   5 0.245 0.00813 67.0, 68.0 -0.31
SPRET/EiJ m 69.0 0.0   5 0.0 0.0 69.0, 69.0 0.07
SWR/J f 89.0 0.0   5 0.0 0.0 89.0, 89.0 1.35
SWR/J m 72.0 0.0   5 0.0 0.0 72.0, 72.0 0.41
WSB/EiJ f 88.0 0.0   3 0.0 0.0 88.0, 88.0 1.28
WSB/EiJ m 92.0 0.0   3 0.0 0.0 92.0, 92.0 2.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 62.0 2.5209 66.9573 57.0427
129S1/SvImJ m 62.0 2.5209 66.9573 57.0427
129T2/SvEmsJ f 63.0 3.2545 69.3999 56.6001
129T2/SvEmsJ m 63.0 3.2545 69.3999 56.6001
129X1/SvJ f 63.0 3.2545 69.3999 56.6001
129X1/SvJ m 63.0 3.2545 69.3999 56.6001
A/J f 87.25 2.8185 92.7925 81.7075
A/J m 72.0 2.5209 76.9573 67.0427
AKR/J f 89.0 2.5209 93.9573 84.0427
AKR/J m 72.0 2.5209 76.9573 67.0427
BALB/cByJ f 63.0 3.2545 69.3999 56.6001
BALB/cByJ m 63.0 3.2545 69.3999 56.6001
BALB/cJ f 105.6667 1.4555 108.5288 102.8046
BALB/cJ m 99.0 1.5065 101.9626 96.0374
BTBR T+ Itpr3tf/J f 63.0 3.2545 69.3999 56.6001
BTBR T+ Itpr3tf/J m 63.0 3.2545 69.3999 56.6001
BUB/BnJ f 64.0 3.2545 70.3999 57.6001
BUB/BnJ m 61.0 3.2545 67.3999 54.6001
C3HeB/FeJ f 89.0 2.5209 93.9573 84.0427
C3HeB/FeJ m 71.0 2.5209 75.9573 66.0427
C3H/HeJ f 84.8 2.5209 89.7573 79.8427
C3H/HeJ m 63.0 1.1754 65.3114 60.6886
C57BL/10J f 62.0 2.5209 66.9573 57.0427
C57BL/10J m 62.0 2.5209 66.9573 57.0427
C57BL/6J f 71.9643 1.0653 74.0591 69.8694
C57BL/6J m 67.8056 0.9395 69.653 65.9581
C57BLKS/J f 63.0 2.5209 67.9573 58.0427
C57BLKS/J m 63.0 2.5209 67.9573 58.0427
C57BR/cdJ f 63.0 3.2545 69.3999 56.6001
C57BR/cdJ m 63.0 3.2545 69.3999 56.6001
C57L/J f 73.2727 1.6996 76.615 69.9305
C57L/J m 65.1875 1.4092 67.9587 62.4163
C58/J f 59.0 3.2545 65.3999 52.6001
C58/J m 72.0 3.2545 78.3999 65.6001
CAST/EiJ f 66.0 1.7826 69.5054 62.4946
CAST/EiJ m 66.0 1.7826 69.5054 62.4946
CBA/J f 96.0 2.5209 100.9573 91.0427
CBA/J m 71.0 2.5209 75.9573 66.0427
CE/J f 68.0 2.5209 72.9573 63.0427
CE/J m 68.0 2.5209 72.9573 63.0427
DBA/1J f 63.0 3.2545 69.3999 56.6001
DBA/1J m 63.0 3.2545 69.3999 56.6001
DBA/2J f 89.0 2.5209 93.9573 84.0427
DBA/2J m 72.0 2.5209 76.9573 67.0427
FVB/NJ f 63.0 3.2545 69.3999 56.6001
FVB/NJ m 63.0 3.2545 69.3999 56.6001
I/LnJ f 58.0 3.2545 64.3999 51.6001
I/LnJ m 84.0 3.9859 91.8382 76.1618
KK/HlJ f 77.0 3.2545 83.3999 70.6001
KK/HlJ m 77.0 3.2545 83.3999 70.6001
LG/J f 65.0 3.2545 71.3999 58.6001
LG/J m 65.0 3.2545 71.3999 58.6001
LP/J f 62.0 2.5209 66.9573 57.0427
LP/J m 62.0 2.5209 66.9573 57.0427
MOLF/EiJ f 73.0 3.9859 80.8382 65.1618
MOLF/EiJ m 73.0 3.9859 80.8382 65.1618
MRL/MpJ f 70.0 2.5209 74.9573 65.0427
MRL/MpJ m 71.0 2.8185 76.5425 65.4575
NOD/ShiLtJ f 63.0 3.2545 69.3999 56.6001
NOD/ShiLtJ m 63.0 3.2545 69.3999 56.6001
NON/ShiLtJ f 63.0 3.2545 69.3999 56.6001
NON/ShiLtJ m 63.0 3.2545 69.3999 56.6001
NZB/BlNJ f 65.5 1.7826 69.0054 61.9946
NZB/BlNJ m 62.0 2.5209 66.9573 57.0427
NZW/LacJ f 63.0 3.2545 69.3999 56.6001
NZW/LacJ m 63.0 3.2545 69.3999 56.6001
PL/J f 63.0 2.5209 67.9573 58.0427
PL/J m 63.0 2.5209 67.9573 58.0427
PWD/PhJ f 104.0 3.2545 110.3999 97.6001
PWD/PhJ m 91.0 3.2545 97.3999 84.6001
RIIIS/J f 60.0 3.2545 66.3999 53.6001
RIIIS/J m 60.0 3.2545 66.3999 53.6001
SJL/J f 63.0 3.2545 69.3999 56.6001
SJL/J m 63.0 3.2545 69.3999 56.6001
SM/J f 62.0 2.5209 66.9573 57.0427
SM/J m 62.0 2.5209 66.9573 57.0427
SPRET/EiJ f 67.4 2.5209 72.3573 62.4427
SPRET/EiJ m 69.0 2.5209 73.9573 64.0427
SWR/J f 89.0 2.5209 93.9573 84.0427
SWR/J m 72.0 2.5209 76.9573 67.0427
WSB/EiJ f 88.0 3.2545 94.3999 81.6001
WSB/EiJ m 92.0 3.2545 98.3999 85.6001


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 62.0 1.7826 65.5054 58.4946
129T2/SvEmsJ both 63.0 2.3013 67.5254 58.4746
129X1/SvJ both 63.0 2.3013 67.5254 58.4746
A/J both 79.625 1.8907 83.343 75.907
AKR/J both 80.5 1.7826 84.0054 76.9946
BALB/cByJ both 63.0 2.3013 67.5254 58.4746
BALB/cJ both 102.3333 1.0474 104.393 100.2737
BTBR T+ Itpr3tf/J both 63.0 2.3013 67.5254 58.4746
BUB/BnJ both 62.5 2.3013 67.0254 57.9746
C3HeB/FeJ both 80.0 1.7826 83.5054 76.4946
C3H/HeJ both 73.9 1.3907 76.6348 71.1652
C57BL/10J both 62.0 1.7826 65.5054 58.4946
C57BL/6J both 69.8849 0.7102 71.2815 68.4884
C57BLKS/J both 63.0 1.7826 66.5054 59.4946
C57BR/cdJ both 63.0 2.3013 67.5254 58.4746
C57L/J both 69.2301 1.1039 71.401 67.0593
C58/J both 65.5 2.3013 70.0254 60.9746
CAST/EiJ both 66.0 1.2605 68.4787 63.5213
CBA/J both 83.5 1.7826 87.0054 79.9946
CE/J both 68.0 1.7826 71.5054 64.4946
DBA/1J both 63.0 2.3013 67.5254 58.4746
DBA/2J both 80.5 1.7826 84.0054 76.9946
FVB/NJ both 63.0 2.3013 67.5254 58.4746
I/LnJ both 71.0 2.5729 76.0595 65.9405
KK/HlJ both 77.0 2.3013 81.5254 72.4746
LG/J both 65.0 2.3013 69.5254 60.4746
LP/J both 62.0 1.7826 65.5054 58.4946
MOLF/EiJ both 73.0 2.8185 78.5425 67.4575
MRL/MpJ both 70.5 1.8907 74.218 66.782
NOD/ShiLtJ both 63.0 2.3013 67.5254 58.4746
NON/ShiLtJ both 63.0 2.3013 67.5254 58.4746
NZB/BlNJ both 63.75 1.5437 66.7857 60.7143
NZW/LacJ both 63.0 2.3013 67.5254 58.4746
PL/J both 63.0 1.7826 66.5054 59.4946
PWD/PhJ both 97.5 2.3013 102.0254 92.9746
RIIIS/J both 60.0 2.3013 64.5254 55.4746
SJL/J both 63.0 2.3013 67.5254 58.4746
SM/J both 62.0 1.7826 65.5054 58.4946
SPRET/EiJ both 68.2 1.7826 71.7054 64.6946
SWR/J both 80.5 1.7826 84.0054 76.9946
WSB/EiJ both 90.0 2.3013 94.5254 85.4746




  GWAS USING LINEAR MIXED MODELS