Project measure / variable:   Petryshen1   PPI_85dB

ID, description, units MPD:34710   PPI_85dB   percent prepulse inhibition (PPI) evoked by 120 dB tone   [%]  85 dB prepulse stimulus  
Data set, strains Petryshen1   B6.A consomic   22 strains     sex: m     age: 7-9wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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Petryshen1 - percent prepulse inhibition (PPI) evoked by 120 dB tone 85 dB prepulse stimulus



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested22 strains
Mean of the strain means41.6   %
Median of the strain means40.8   %
SD of the strain means± 7.26
Coefficient of variation (CV)0.174
Min–max range of strain means27.3   –   57.2   %
Mean sample size per strain23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 24478.4565 1165.6408 6.1228 < 0.0001
Residuals 569 108324.7069 190.3773


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 m 43.5 13.1   25 2.61 0.3 16.8, 66.0 0.26
B6.A-Chr10 m 48.3 14.9   25 2.99 0.309 7.05, 80.4 0.92
B6.A-Chr11 m 56.6 19.0   25 3.8 0.335 23.7, 86.3 2.06
B6.A-Chr12 m 43.8 15.2   25 3.04 0.347 17.7, 72.6 0.3
B6.A-Chr14 m 36.7 16.2   20 3.62 0.441 2.76, 67.4 -0.68
B6.A-Chr15 m 37.2 9.87   25 1.97 0.265 22.7, 65.4 -0.61
B6.A-Chr16 m 57.2 9.22   12 2.66 0.161 41.8, 77.3 2.15
B6.A-Chr17 m 40.9 16.3   17 3.95 0.398 15.2, 74.7 -0.1
B6.A-Chr18 m 38.1 10.4   18 2.45 0.273 21.0, 58.1 -0.49
B6.A-Chr19 m 39.9 13.6   19 3.12 0.34 -0.064, 62.3 -0.24
B6.A-Chr2 m 35.6 13.8   24 2.82 0.388 4.49, 58.9 -0.83
B6.A-Chr3 m 33.2 10.6   25 2.12 0.319 8.15, 49.0 -1.16
B6.A-Chr4 m 27.3 12.8   25 2.56 0.468 5.46, 54.0 -1.97
B6.A-Chr5 m 40.8 12.5   25 2.5 0.307 15.4, 63.4 -0.11
B6.A-Chr6 m 36.8 15.9   25 3.19 0.433 7.38, 68.5 -0.66
B6.A-Chr7 m 41.6 15.2   25 3.04 0.366 12.4, 67.1 0.0
B6.A-Chr8 m 35.6 13.3   25 2.67 0.375 15.1, 67.4 -0.83
B6.A-Chr9 m 44.9 10.8   25 2.17 0.242 27.2, 64.0 0.45
B6.A-ChrX m 42.9 13.2   19 3.03 0.308 12.4, 66.0 0.18
B6.A-ChrY m 53.4 13.6   25 2.71 0.254 31.0, 77.3 1.62
B6.A-mt m 41.8 11.8   23 2.46 0.283 21.7, 62.9 0.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 m 43.528 2.7595 48.9481 38.1079
B6.A-Chr10 m 48.318 2.7595 53.7381 42.8979
B6.A-Chr11 m 56.64 2.7595 62.0601 51.2199
B6.A-Chr12 m 43.772 2.7595 49.1921 38.3519
B6.A-Chr14 m 36.713 3.0853 42.7729 30.6531
B6.A-Chr15 m 37.192 2.7595 42.6121 31.7719
B6.A-Chr16 m 57.2 3.9831 65.0233 49.3767
B6.A-Chr17 m 40.9353 3.3464 47.5082 34.3624
B6.A-Chr18 m 38.0556 3.2522 44.4433 31.6679
B6.A-Chr19 m 39.8808 3.1654 46.0982 33.6635
B6.A-Chr2 m 35.5579 2.8164 41.0898 30.026
B6.A-Chr3 m 33.218 2.7595 38.6381 27.7979
B6.A-Chr4 m 27.33 2.7595 32.7501 21.9099
B6.A-Chr5 m 40.812 2.7595 46.2321 35.3919
B6.A-Chr6 m 36.8244 2.7595 42.2445 31.4043
B6.A-Chr7 m 41.556 2.7595 46.9761 36.1359
B6.A-Chr8 m 35.58 2.7595 41.0001 30.1599
B6.A-Chr9 m 44.876 2.7595 50.2961 39.4559
B6.A-ChrX m 42.8526 3.1654 49.07 36.6353
B6.A-ChrY m 53.42 2.7595 58.8401 47.9999
B6.A-mt m 41.8043 2.877 47.4552 36.1535
C57BL/6J m 39.5816 1.2923 42.1198 37.0434




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA