Phenotype measure:   Petryshen1   ASR_85

ID, description, units MPD:34706   ASR_85   acoustic startle response (ASR) evoked by 120 dB tone   [N]  with 85 dB prepulse stimulus
Data set, strains Petryshen1   B6.A consomic   22 strains     sex: m     age: 7-9wks
Procedure acoustic startle test
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Petryshen1 - acoustic startle response (ASR) evoked by 120 dB tone with 85 dB prepulse stimulus



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested22 strains
Mean of the strain means0.837   N
Median of the strain means0.798   N
SD of the strain means± 0.237
Coefficient of variation (CV)0.283
Min–max range of strain means0.472   –   1.52   N
Mean sample size per strain23.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 29.0632 1.384 10.0608 < 0.0001
Residuals 569 78.2715 0.1376


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.A-Chr1 m 0.788 0.349   25 0.0698 0.442 0.336, 1.61 -0.21
B6.A-Chr10 m 0.472 0.241   25 0.0483 0.512 0.191, 1.17 -1.54
B6.A-Chr11 m 0.548 0.368   25 0.0736 0.671 0.097, 1.36 -1.22
B6.A-Chr12 m 1.01 0.439   25 0.0879 0.436 0.271, 1.9 0.73
B6.A-Chr14 m 0.836 0.275   20 0.0615 0.329 0.263, 1.4 0.0
B6.A-Chr15 m 0.95 0.331   25 0.0662 0.349 0.406, 1.75 0.48
B6.A-Chr16 m 0.632 0.352   12 0.102 0.558 0.229, 1.52 -0.87
B6.A-Chr17 m 0.609 0.362   17 0.0878 0.594 0.131, 1.46 -0.96
B6.A-Chr18 m 0.876 0.416   18 0.0981 0.475 0.246, 1.62 0.16
B6.A-Chr19 m 0.689 0.327   19 0.075 0.475 0.115, 1.2 -0.62
B6.A-Chr2 m 0.928 0.485   24 0.0991 0.523 0.345, 2.39 0.38
B6.A-Chr3 m 0.947 0.346   25 0.0693 0.366 0.482, 1.95 0.46
B6.A-Chr4 m 1.52 0.428   25 0.0855 0.282 0.708, 2.43 2.88
B6.A-Chr5 m 0.671 0.315   25 0.0629 0.469 0.234, 1.49 -0.7
B6.A-Chr6 m 0.807 0.352   25 0.0704 0.436 0.083, 1.53 -0.13
B6.A-Chr7 m 1.19 0.463   25 0.0926 0.389 0.441, 2.13 1.49
B6.A-Chr8 m 1.12 0.333   25 0.0665 0.296 0.565, 1.8 1.19
B6.A-Chr9 m 0.747 0.288   25 0.0576 0.386 0.341, 1.33 -0.38
B6.A-ChrX m 0.729 0.342   19 0.0784 0.469 0.319, 1.74 -0.46
B6.A-ChrY m 0.626 0.271   25 0.0542 0.433 0.218, 1.15 -0.89
B6.A-mt m 0.772 0.391   23 0.0814 0.506 0.253, 1.7 -0.27
C57BL/6J m 0.951 0.406   114 0.038 0.427 0.187, 2.11 0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.A-Chr1 m 0.7883 0.0742 0.934 0.6426
B6.A-Chr10 m 0.4716 0.0742 0.6173 0.3259
B6.A-Chr11 m 0.5483 0.0742 0.694 0.4026
B6.A-Chr12 m 1.0078 0.0742 1.1535 0.8621
B6.A-Chr14 m 0.8357 0.0829 0.9986 0.6728
B6.A-Chr15 m 0.9497 0.0742 1.0954 0.804
B6.A-Chr16 m 0.6318 0.1071 0.8421 0.4215
B6.A-Chr17 m 0.6094 0.09 0.786 0.4327
B6.A-Chr18 m 0.8758 0.0874 1.0475 0.7041
B6.A-Chr19 m 0.6889 0.0851 0.8561 0.5218
B6.A-Chr2 m 0.9277 0.0757 1.0764 0.779
B6.A-Chr3 m 0.9466 0.0742 1.0923 0.8009
B6.A-Chr4 m 1.5188 0.0742 1.6645 1.3731
B6.A-Chr5 m 0.6708 0.0742 0.8165 0.5251
B6.A-Chr6 m 0.8068 0.0742 0.9525 0.6611
B6.A-Chr7 m 1.191 0.0742 1.3367 1.0453
B6.A-Chr8 m 1.1241 0.0742 1.2698 0.9784
B6.A-Chr9 m 0.7465 0.0742 0.8922 0.6008
B6.A-ChrX m 0.7287 0.0851 0.8958 0.5616
B6.A-ChrY m 0.626 0.0742 0.7717 0.4803
B6.A-mt m 0.7722 0.0773 0.9241 0.6203
C57BL/6J m 0.9507 0.0347 1.0189 0.8825




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA