Phenotype measure:   Jax5   age_first_litter

ID, description, units MPD:31483   age_first_litter   age at first litter   [wks]
Data set, strains Jax5   inbred   35 strains     sex: f     age: various
Procedure colony observation
Ontology mappings

  STRAIN COMPARISON PLOT
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Jax5 - age at first litter



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means11.0   wks
Median of the strain means10.6   wks
SD of the strain means± 1.36
Coefficient of variation (CV)0.124
Min–max range of strain means9.26   –   15.7   wks
Mean sample size per strain46.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 2936.5814 86.37 18.8904 < 0.0001
Residuals 1583 7237.7227 4.5722


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 11.5 2.51   49 0.358 0.218 9.0, 18.0 0.37
129S1/SvImJ f 9.53 1.36   47 0.199 0.143 7.0, 16.0 -1.08
129X1/SvJ f 10.8 1.8   48 0.26 0.166 8.0, 16.0 -0.15
A/J f 10.6 2.12   51 0.297 0.2 9.0, 20.0 -0.29
AKR/J f 10.2 1.46   49 0.209 0.144 9.0, 17.0 -0.59
B6.129P2-Apoetm1Unc/J f 10.5 2.06   50 0.292 0.196 9.0, 20.0 -0.37
B6(Cg)-Tyrc-2J/J f 9.94 1.55   18 0.366 0.156 8.0, 14.0 -0.78
BALB/cByJ f 12.2 2.05   43 0.313 0.168 9.0, 19.0 0.88
BALB/cJ f 13.2 2.93   50 0.414 0.222 9.0, 23.0 1.62
C3HeB/FeJ f 9.26 0.994   34 0.171 0.107 8.0, 14.0 -1.28
C3H/HeJ f 10.3 1.54   50 0.218 0.15 6.0, 14.0 -0.51
C3H/HeOuJ f 9.58 0.971   50 0.137 0.101 8.0, 13.0 -1.04
C57BL/10J f 11.3 2.21   50 0.312 0.195 9.0, 20.0 0.22
C57BL/6J f 9.51 0.925   51 0.129 0.0972 7.0, 12.0 -1.09
C57BLKS/J f 12.0 2.78   45 0.414 0.231 9.0, 24.0 0.74
C57L/J f 12.5 2.64   42 0.408 0.211 10.0, 20.0 1.11
CAST/EiJ f 15.7 5.24   49 0.748 0.333 8.0, 30.0 3.46
CBA/CaJ f 10.2 1.45   49 0.208 0.143 6.0, 14.0 -0.59
CBA/J f 11.2 1.71   49 0.245 0.152 9.0, 17.0 0.15
DBA/1J f 10.2 1.31   50 0.186 0.129 8.0, 13.0 -0.59
DBA/1LacJ f 9.86 0.913   49 0.13 0.0926 8.0, 13.0 -0.84
DBA/2J f 10.5 1.82   49 0.259 0.173 7.0, 16.0 -0.37
FVB/NJ f 9.76 1.71   50 0.242 0.175 8.0, 19.0 -0.91
KK/HlJ f 10.4 1.68   25 0.337 0.162 9.0, 14.0 -0.44
LP/J f 12.0 2.63   50 0.371 0.22 9.0, 22.0 0.74
MRL/MpJ f 10.5 1.67   50 0.236 0.159 8.0, 16.0 -0.37
NOD.CB17-Prkdcscid/J f 11.5 1.49   50 0.21 0.129 10.0, 16.0 0.37
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 9.45 2.56   22 0.545 0.271 6.0, 15.0 -1.14
NOD/ShiLtJ f 12.0 1.75   50 0.247 0.145 8.0, 17.0 0.74
NZB/BlNJ f 12.8 2.55   50 0.361 0.2 10.0, 23.0 1.33
NZW/LacJ f 10.8 1.29   50 0.182 0.119 9.0, 15.0 -0.15
PL/J f 13.0 3.9   49 0.558 0.299 9.0, 28.0 1.47
SJL/J f 9.72 1.2   50 0.169 0.123 8.0, 13.0 -0.94
SM/J f 11.4 1.99   50 0.281 0.175 9.0, 19.0 0.3
SWR/J f 11.0 1.44   50 0.203 0.131 9.0, 16.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 11.5102 0.3055 12.1094 10.911
129S1/SvImJ f 9.5319 0.3119 10.1437 8.9201
129X1/SvJ f 10.8333 0.3086 11.4387 10.228
A/J f 10.5882 0.2994 11.1755 10.0009
AKR/J f 10.1633 0.3055 10.7624 9.5641
B6.129P2-Apoetm1Unc/J f 10.54 0.3024 11.1331 9.9469
B6(Cg)-Tyrc-2J/J f 9.9444 0.504 10.933 8.9559
BALB/cByJ f 12.2093 0.3261 12.8489 11.5697
BALB/cJ f 13.18 0.3024 13.7731 12.5869
C3HeB/FeJ f 9.2647 0.3667 9.984 8.5454
C3H/HeJ f 10.32 0.3024 10.9131 9.7269
C3H/HeOuJ f 9.58 0.3024 10.1731 8.9869
C57BL/10J f 11.32 0.3024 11.9131 10.7269
C57BL/6J f 9.5098 0.2994 10.0971 8.9225
C57BLKS/J f 12.0222 0.3188 12.6474 11.397
C57L/J f 12.5476 0.3299 13.1948 11.9005
CAST/EiJ f 15.7347 0.3055 16.3339 15.1355
CBA/CaJ f 10.1837 0.3055 10.7828 9.5845
CBA/J f 11.2449 0.3055 11.8441 10.6457
DBA/1J f 10.16 0.3024 10.7531 9.5669
DBA/1LacJ f 9.8571 0.3055 10.4563 9.258
DBA/2J f 10.4694 0.3055 11.0685 9.8702
FVB/NJ f 9.76 0.3024 10.3531 9.1669
KK/HlJ f 10.4 0.4277 11.2388 9.5612
LP/J f 11.96 0.3024 12.5531 11.3669
MRL/MpJ f 10.52 0.3024 11.1131 9.9269
NOD.CB17-Prkdcscid/J f 11.52 0.3024 12.1131 10.9269
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 9.4545 0.4559 10.3487 8.5604
NOD/ShiLtJ f 12.04 0.3024 12.6331 11.4469
NZB/BlNJ f 12.76 0.3024 13.3531 12.1669
NZW/LacJ f 10.82 0.3024 11.4131 10.2269
PL/J f 13.0408 0.3055 13.64 12.4417
SJL/J f 9.72 0.3024 10.3131 9.1269
SM/J f 11.38 0.3024 11.9731 10.7869
SWR/J f 10.98 0.3024 11.5731 10.3869




  GWAS USING LINEAR MIXED MODELS