Project measure / variable:   Korstanje1   CREA_M24

ID, description, units MPD:29713   CREA_M24   creatinine (urine CREA)   [mg/dL]  at age 24mo  
Data set, strains Korstanje1   inbred   25 strains     sex: both     age: 104wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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Korstanje1 - creatinine (urine CREA) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested24 strains24 strains
Mean of the strain means71.7   mg/dL 71.8   mg/dL
Median of the strain means74.2   mg/dL 73.0   mg/dL
SD of the strain means± 25.1 ± 18.5
Coefficient of variation (CV)0.350 0.257
Min–max range of strain means25.4   –   118   mg/dL 34.2   –   112   mg/dL
Mean sample size per strain7.2   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3293 0.3293 0.0006 0.9809
strain 22 109191.2372 4963.2381 8.6326 < 0.0001
sex:strain 22 39971.0213 1816.8646 3.1601 < 0.0001
Residuals 274 157534.156 574.9422


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 84.5 30.0   8 10.6 0.355 20.5, 118.0 0.51
129S1/SvImJ m 75.9 14.6   6 5.97 0.192 60.7, 99.4 0.22
A/J f 91.5 32.1   9 10.7 0.35 47.1, 142.0 0.79
A/J m 84.6 15.8   4 7.89 0.186 71.5, 107.0 0.69
BALB/cByJ f 89.3 18.7   7 7.06 0.209 61.0, 119.0 0.7
BALB/cByJ m 72.6 13.7   7 5.2 0.189 51.2, 98.3 0.04
BTBR T+ Itpr3tf/J m 76.0 44.9   5 20.1 0.591 29.4, 132.0 0.23
BUB/BnJ f 41.6 29.0   6 11.8 0.696 11.2, 95.6 -1.2
BUB/BnJ m 66.0 18.8   6 7.67 0.284 39.8, 96.6 -0.31
C3H/HeJ f 58.6 22.1   10 7.0 0.378 21.2, 88.8 -0.52
C3H/HeJ m 87.8 29.4   8 10.4 0.335 38.0, 122.0 0.87
C57BL/10J f 72.7 23.6   9 7.86 0.324 38.1, 117.0 0.04
C57BL/10J m 82.9 27.3   9 9.09 0.329 41.5, 124.0 0.6
C57BL/6J f 57.3 31.3   6 12.8 0.546 30.4, 110.0 -0.57
C57BL/6J m 70.2 18.1   6 7.39 0.258 50.9, 94.5 -0.09
C57BLKS/J f 53.1 23.6   8 8.35 0.445 10.8, 92.7 -0.74
C57BLKS/J m 83.8 19.6   9 6.55 0.234 46.9, 105.0 0.65
C57BR/cdJ f 117.0 21.8   6 8.92 0.187 89.0, 149.0 1.8
C57BR/cdJ m 68.4 20.6   7 7.77 0.301 47.4, 106.0 -0.18
C57L/J f 98.9 17.1   6 7.0 0.173 76.7, 120.0 1.08
C57L/J m 68.1 22.6   7 8.54 0.332 32.5, 103.0 -0.2
CBA/J f 118.0 39.0   8 13.8 0.331 50.0, 171.0 1.84
CBA/J m 89.0 10.5   7 3.96 0.118 77.9, 104.0 0.93
DBA/2J f 90.4 19.1   6 7.78 0.211 73.0, 115.0 0.74
DBA/2J m 73.5 23.4   6 9.57 0.319 43.2, 108.0 0.09
FVB/NJ f 86.7 40.8   8 14.4 0.471 48.4, 158.0 0.6
FVB/NJ m 112.0 48.3   7 18.2 0.432 58.2, 204.0 2.18
LP/J f 78.7 20.5   8 7.23 0.26 55.4, 109.0 0.28
LP/J m 77.1 10.0   7 3.79 0.13 67.9, 97.2 0.29
NOD.B10Sn-H2b/J f 54.7 11.5   5 5.13 0.21 36.7, 66.8 -0.68
NOD.B10Sn-H2b/J m 60.6 15.7   6 6.4 0.259 44.2, 83.1 -0.61
NON/ShiLtJ f 59.0 26.1   9 8.7 0.443 7.29, 88.1 -0.51
NON/ShiLtJ m 86.6 22.6   6 9.21 0.26 52.1, 115.0 0.8
NZW/LacJ f 70.9 34.2   7 12.9 0.482 22.8, 124.0 -0.03
NZW/LacJ m 41.7 13.0   6 5.31 0.312 30.7, 67.3 -1.63
P/J f 48.4 21.0   7 7.94 0.434 25.6, 73.6 -0.93
PWD/PhJ f 25.4 8.1   7 3.06 0.319 17.6, 40.7 -1.84
PWD/PhJ m 43.9 22.1   8 7.83 0.504 18.0, 79.9 -1.51
RIIIS/J f 89.6 31.5   6 12.9 0.352 47.3, 142.0 0.71
RIIIS/J m 66.2 27.0   6 11.0 0.407 25.2, 110.0 -0.3
SJL/J f 46.7 24.2   6 9.88 0.518 13.8, 86.0 -1.0
SJL/J m 38.1 9.69   4 4.84 0.254 30.9, 52.4 -1.83
SM/J f 87.0 19.5   6 7.97 0.225 63.6, 115.0 0.61
SM/J m 69.7 8.07   7 3.05 0.116 58.4, 79.2 -0.11
SWR/J f 25.7 24.3   8 8.6 0.945 6.29, 81.6 -1.83
SWR/J m 34.2 6.35   7 2.4 0.186 27.2, 44.8 -2.04
WSB/EiJ f 75.7 16.8   7 6.35 0.222 53.7, 98.3 0.16
WSB/EiJ m 94.1 14.8   8 5.22 0.157 74.7, 113.0 1.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 84.4625 8.4775 101.1518 67.7732
129S1/SvImJ m 75.9167 9.789 95.1878 56.6455
A/J f 91.4889 7.9927 107.2237 75.7541
A/J m 84.625 11.989 108.2272 61.0228
BALB/cByJ f 89.2714 9.0628 107.113 71.4298
BALB/cByJ m 72.5857 9.0628 90.4273 54.7441
BUB/BnJ f 41.6167 9.789 60.8878 22.3455
BUB/BnJ m 66.0333 9.789 85.3045 46.7622
C3H/HeJ f 58.62 7.5825 73.5474 43.6926
C3H/HeJ m 87.8375 8.4775 104.5268 71.1482
C57BL/10J f 72.7111 7.9927 88.4459 56.9763
C57BL/10J m 82.9222 7.9927 98.657 67.1874
C57BL/6J f 57.3167 9.789 76.5878 38.0455
C57BL/6J m 70.2167 9.789 89.4878 50.9455
C57BLKS/J f 53.125 8.4775 69.8143 36.4357
C57BLKS/J m 83.7778 7.9927 99.5126 68.043
C57BR/cdJ f 116.8333 9.789 136.1045 97.5622
C57BR/cdJ m 68.3714 9.0628 86.213 50.5298
C57L/J f 98.9 9.789 118.1711 79.6289
C57L/J m 68.1 9.0628 85.9416 50.2584
CBA/J f 117.6 8.4775 134.2893 100.9107
CBA/J m 89.0143 9.0628 106.8559 71.1727
DBA/2J f 90.4333 9.789 109.7045 71.1622
DBA/2J m 73.5167 9.789 92.7878 54.2455
FVB/NJ f 86.7125 8.4775 103.4018 70.0232
FVB/NJ m 111.6571 9.0628 129.4987 93.8155
LP/J f 78.725 8.4775 95.4143 62.0357
LP/J m 77.1143 9.0628 94.9559 59.2727
NOD.B10Sn-H2b/J f 54.68 10.7233 75.7905 33.5695
NOD.B10Sn-H2b/J m 60.5667 9.789 79.8378 41.2955
NON/ShiLtJ f 58.9544 7.9927 74.6893 43.2196
NON/ShiLtJ m 86.6167 9.789 105.8878 67.3455
NZW/LacJ f 70.9143 9.0628 88.7559 53.0727
NZW/LacJ m 41.6833 9.789 60.9545 22.4122
PWD/PhJ f 25.3714 9.0628 43.213 7.5298
PWD/PhJ m 43.9375 8.4775 60.6268 27.2482
RIIIS/J f 89.6167 9.789 108.8878 70.3455
RIIIS/J m 66.2333 9.789 85.5045 46.9622
SJL/J f 46.7333 9.789 66.0045 27.4622
SJL/J m 38.1 11.989 61.7022 14.4978
SM/J f 86.9833 9.789 106.2545 67.7122
SM/J m 69.7429 9.0628 87.5845 51.9013
SWR/J f 25.7313 8.4775 42.4205 9.042
SWR/J m 34.1714 9.0628 52.013 16.3298
WSB/EiJ f 75.6857 9.0628 93.5273 57.8441
WSB/EiJ m 94.05 8.4775 110.7393 77.3607


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 80.1896 6.4748 92.9362 67.4429
A/J both 88.0569 7.2045 102.2401 73.8738
BALB/cByJ both 80.9286 6.4084 93.5445 68.3127
BUB/BnJ both 53.825 6.9218 67.4517 40.1983
C3H/HeJ both 73.2288 5.6869 84.4243 62.0332
C57BL/10J both 77.8167 5.6517 88.9429 66.6905
C57BL/6J both 63.7667 6.9218 77.3934 50.1399
C57BLKS/J both 68.4514 5.8256 79.92 56.9828
C57BR/cdJ both 92.6024 6.6701 105.7334 79.4713
C57L/J both 83.5 6.6701 96.6311 70.3689
CBA/J both 103.3071 6.2049 115.5224 91.0918
DBA/2J both 81.975 6.9218 95.6017 68.3483
FVB/NJ both 99.1848 6.2049 111.4001 86.9695
LP/J both 77.9196 6.2049 90.1349 65.7043
NOD.B10Sn-H2b/J both 57.6233 7.2597 71.9152 43.3315
NON/ShiLtJ both 72.7856 6.3187 85.225 60.3461
NZW/LacJ both 56.2988 6.6701 69.4299 43.1678
PWD/PhJ both 34.6545 6.2049 46.8698 22.4392
RIIIS/J both 77.925 6.9218 91.5517 64.2983
SJL/J both 42.4167 7.7389 57.6518 27.1815
SM/J both 78.3631 6.6701 91.4942 65.232
SWR/J both 29.9513 6.2049 42.1666 17.736
WSB/EiJ both 84.8679 6.2049 97.0832 72.6526




  GWAS USING LINEAR MIXED MODELS