Project measure / variable:   Korstanje1   MA_M18

ID, description, units MPD:29702   MA_M18   microalbumin (urine MA)   [mg/dL]  at age 18mo  
Data set, strains Korstanje1   inbred   30 strains     sex: both     age: 78wks
Procedure urinalysis
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  STRAIN COMPARISON PLOT
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Korstanje1 - microalbumin (urine MA) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains29 strains
Mean of the strain means8.51   mg/dL 5.94   mg/dL
Median of the strain means3.54   mg/dL 3.33   mg/dL
SD of the strain means± 11.4 ± 8.89
Coefficient of variation (CV)1.34 1.50
Min–max range of strain means0   –   52.9   mg/dL 0   –   39.7   mg/dL
Mean sample size per strain7.4   mice 7.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1043.2986 1043.2986 4.4656 0.0353
strain 28 29640.0517 1058.5733 4.531 < 0.0001
sex:strain 28 13771.5622 491.8415 2.1052 0.0011
Residuals 363 84808.1783 233.6313


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.24 5.23   6 2.14 1.23 -0.38
129S1/SvImJ m 2.69 2.74   8 0.97 1.02 -0.37
A/J f 20.3 16.5   6 6.73 0.81 5.68, 45.5 1.04
A/J m 19.8 15.6   7 5.91 0.79 1.56
BALB/cByJ f 0.0 0.0   8 0.0 0.0 -0.75
BALB/cByJ m 0.0 0.0   6 0.0 0.0 -0.67
BTBR T+ Itpr3tf/J f 4.44 4.71   6 1.92 1.06 -0.36
BTBR T+ Itpr3tf/J m 0.146 0.386   7 0.146 2.65 -0.65
BUB/BnJ f 22.4 32.7   12 9.44 1.46 1.22
BUB/BnJ m 1.42 3.27   6 1.34 2.31 -0.51
C3H/HeJ f 2.85 3.33   6 1.36 1.17 -0.5
C3H/HeJ m 0.147 0.359   6 0.147 2.45 -0.65
C57BL/10J f 2.04 2.27   6 0.927 1.12 -0.57
C57BL/10J m 3.33 3.95   8 1.39 1.18 -0.29
C57BL/6J f 9.13 14.0   7 5.29 1.53 0.05
C57BL/6J m 4.73 11.3   8 4.01 2.4 -0.14
C57BLKS/J f 0.825 2.22   12 0.642 2.69 -0.68
C57BLKS/J m 2.32 3.48   8 1.23 1.5 -0.41
C57BR/cdJ f 1.1 2.4   7 0.906 2.17 -0.65
C57BR/cdJ m 0.0 0.0   7 0.0 0.0 -0.67
C57L/J f 0.0 0.0   8 0.0 0.0 -0.75
C57L/J m 1.61 1.78   6 0.726 1.11 -0.49
CAST/EiJ f 2.73 4.28   5 1.91 1.57 -0.51
CBA/J f 0.0 0.0   8 0.0 0.0 -0.75
CBA/J m 3.78 3.34   6 1.36 0.884 -0.24
DBA/2J f 1.54 4.08   7 1.54 2.65 -0.61
DBA/2J m 2.17 4.44   10 1.4 2.04 -0.42
FVB/NJ f 2.54 6.34   7 2.4 2.5 -0.53
FVB/NJ m 3.78 6.98   6 2.85 1.85 -0.24
KK/HlJ f 52.9 44.8   8 15.8 0.846 3.91
KK/HlJ m 25.1 25.0   7 9.47 0.998 1.87, 70.9 2.15
LP/J f 0.68 1.25   6 0.508 1.83 -0.69
LP/J m 4.58 6.06   8 2.14 1.32 -0.15
MRL/MpJ f 24.2 36.1   7 13.7 1.49 1.38
MRL/MpJ m 0.0 0.0   6 0.0 0.0 -0.67
NOD.B10Sn-H2b/J f 4.55 10.6   10 3.36 2.34 -0.35
NOD.B10Sn-H2b/J m 13.6 16.9   6 6.91 1.25 0.86
NON/ShiLtJ f 20.9 36.0   8 12.7 1.72 1.09
NON/ShiLtJ m 3.44 2.38   8 0.842 0.691 -0.28
NZO/HlLtJ f 16.7 33.5   7 12.7 2.01 0.92, 92.0 0.72
NZO/HlLtJ m 8.84 10.9   7 4.12 1.23 0.33
NZW/LacJ f 13.0 30.6   6 12.5 2.35 0.39
NZW/LacJ m 3.86 8.5   8 3.0 2.2 -0.23
P/J f 1.67 2.82   6 1.15 1.69 -0.6
P/J m 2.25 4.23   8 1.49 1.88 -0.42
PL/J f 0.0683 0.167   6 0.0683 2.45 -0.74
PL/J m 0.113 0.278   6 0.113 2.45 -0.66
PWD/PhJ f 1.52 3.2   7 1.21 2.1 -0.62
PWD/PhJ m 39.7 38.5   6 15.7 0.968 3.8
RIIIS/J f 1.3 3.07   7 1.16 2.37 -0.63
RIIIS/J m 3.33 4.37   8 1.55 1.31 -0.29
SJL/J f 13.0 16.1   7 6.09 1.24 0.39
SJL/J m 0.0425 0.085   4 0.0425 2.0 -0.66
SM/J f 16.9 25.5   8 9.0 1.51 0.74
SM/J m 10.7 8.48   8 3.0 0.793 1.33, 22.6 0.54
SWR/J f 8.87 13.0   7 4.93 1.47 0.88, 32.4 0.03
SWR/J m 0.136 0.359   7 0.136 2.65 -0.65
WSB/EiJ f 4.92 8.51   12 2.46 1.73 -0.32
WSB/EiJ m 10.7 7.1   7 2.68 0.666 4.35, 23.9 0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.2367 6.2401 16.5079 -8.0346
129S1/SvImJ m 2.6938 5.4041 13.321 -7.9335
A/J f 20.3333 6.2401 32.6046 8.0621
A/J m 19.8 5.7772 31.161 8.439
BALB/cByJ f 0.0 5.4041 10.6272 -10.6272
BALB/cByJ m 0.0 6.2401 12.2712 -12.2712
BTBR T+ Itpr3tf/J f 4.4383 6.2401 16.7096 -7.8329
BTBR T+ Itpr3tf/J m 0.1457 5.7772 11.5067 -11.2152
BUB/BnJ f 22.4 4.4124 31.0771 13.7229
BUB/BnJ m 1.4167 6.2401 13.6879 -10.8546
C3H/HeJ f 2.855 6.2401 15.1262 -9.4162
C3H/HeJ m 0.1467 6.2401 12.4179 -12.1246
C57BL/10J f 2.035 6.2401 14.3062 -10.2362
C57BL/10J m 3.3325 5.4041 13.9597 -7.2947
C57BL/6J f 9.1343 5.7772 20.4952 -2.2267
C57BL/6J m 4.7263 5.4041 15.3535 -5.901
C57BLKS/J f 0.825 4.4124 9.5021 -7.8521
C57BLKS/J m 2.3212 5.4041 12.9485 -8.306
C57BR/cdJ f 1.1029 5.7772 12.4638 -10.2581
C57BR/cdJ m 0.0 5.7772 11.361 -11.361
C57L/J f 0.0 5.4041 10.6272 -10.6272
C57L/J m 1.6083 6.2401 13.8796 -10.6629
CBA/J f 0.0 5.4041 10.6272 -10.6272
CBA/J m 3.78 6.2401 16.0512 -8.4912
DBA/2J f 1.5429 5.7772 12.9038 -9.8181
DBA/2J m 2.174 4.8335 11.6793 -7.3313
FVB/NJ f 2.54 5.7772 13.901 -8.821
FVB/NJ m 3.7783 6.2401 16.0496 -8.4929
KK/HlJ f 52.8912 5.4041 63.5185 42.264
KK/HlJ m 25.1 5.7772 36.461 13.739
LP/J f 0.68 6.2401 12.9512 -11.5912
LP/J m 4.585 5.4041 15.2122 -6.0422
MRL/MpJ f 24.1914 5.7772 35.5524 12.8305
MRL/MpJ m 0.0 6.2401 12.2712 -12.2712
NOD.B10Sn-H2b/J f 4.55 4.8335 14.0553 -4.9553
NOD.B10Sn-H2b/J m 13.5933 6.2401 25.8646 1.3221
NON/ShiLtJ f 20.8875 5.4041 31.5147 10.2603
NON/ShiLtJ m 3.4438 5.4041 14.071 -7.1835
NZO/HlLtJ f 16.7 5.7772 28.061 5.339
NZO/HlLtJ m 8.8429 5.7772 20.2038 -2.5181
NZW/LacJ f 13.0417 6.2401 25.3129 0.7704
NZW/LacJ m 3.86 5.4041 14.4872 -6.7672
P/J f 1.6667 6.2401 13.9379 -10.6046
P/J m 2.2525 5.4041 12.8797 -8.3747
PL/J f 0.0683 6.2401 12.3396 -12.2029
PL/J m 0.1133 6.2401 12.3846 -12.1579
PWD/PhJ f 1.5243 5.7772 12.8852 -9.8367
PWD/PhJ m 39.7117 6.2401 51.9829 27.4404
RIIIS/J f 1.2971 5.7772 12.6581 -10.0638
RIIIS/J m 3.3275 5.4041 13.9547 -7.2997
SJL/J f 12.9957 5.7772 24.3567 1.6348
SJL/J m 0.0425 7.6425 15.0716 -14.9866
SM/J f 16.91 5.4041 27.5372 6.2828
SM/J m 10.6838 5.4041 21.311 0.0565
SWR/J f 8.8671 5.7772 20.2281 -2.4938
SWR/J m 0.1357 5.7772 11.4967 -11.2252
WSB/EiJ f 4.915 4.4124 13.5921 -3.7621
WSB/EiJ m 10.6614 5.7772 22.0224 -0.6995


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.4652 4.1274 11.5819 -4.6515
A/J both 20.0667 4.2519 28.4281 11.7052
BALB/cByJ both 0.0 4.1274 8.1167 -8.1167
BTBR T+ Itpr3tf/J both 2.292 4.2519 10.6535 -6.0694
BUB/BnJ both 11.9083 3.8213 19.4229 4.3938
C3H/HeJ both 1.5008 4.4124 10.1779 -7.1762
C57BL/10J both 2.6837 4.1274 10.8004 -5.4329
C57BL/6J both 6.9303 3.9554 14.7086 -0.848
C57BLKS/J both 1.5731 3.4883 8.433 -5.2867
C57BR/cdJ both 0.5514 4.0851 8.5848 -7.482
C57L/J both 0.8042 4.1274 8.9208 -7.3125
CBA/J both 1.89 4.1274 10.0067 -6.2267
DBA/2J both 1.8584 3.7663 9.2649 -5.548
FVB/NJ both 3.1592 4.2519 11.5206 -5.2023
KK/HlJ both 38.9956 3.9554 46.7739 31.2173
LP/J both 2.6325 4.1274 10.7492 -5.4842
MRL/MpJ both 12.0957 4.2519 20.4572 3.7343
NOD.B10Sn-H2b/J both 9.0717 3.9466 16.8327 1.3107
NON/ShiLtJ both 12.1656 3.8213 19.6802 4.6511
NZO/HlLtJ both 12.7714 4.0851 20.8048 4.738
NZW/LacJ both 8.4508 4.1274 16.5675 0.3342
P/J both 1.9596 4.1274 10.0762 -6.1571
PL/J both 0.0908 4.4124 8.7679 -8.5862
PWD/PhJ both 20.618 4.2519 28.9794 12.2565
RIIIS/J both 2.3123 3.9554 10.0906 -5.466
SJL/J both 6.5191 4.7902 15.9391 -2.9009
SM/J both 13.7969 3.8213 21.3114 6.2823
SWR/J both 4.5014 4.0851 12.5348 -3.532
WSB/EiJ both 7.7882 3.6347 14.936 0.6404




  GWAS USING LINEAR MIXED MODELS