Project measure / variable:   Svenson4   body_length

ID, description, units MPD:27408   body_length   body length (tip of nose to base of tail)   [cm]  
Data set, strains Svenson4   B6.PWD consomic w/par   28 strains     sex: both     age: 16wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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Svenson4 - body length (tip of nose to base of tail)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means8.41   cm 8.74   cm
Median of the strain means8.39   cm 8.76   cm
SD of the strain means± 0.222 ± 0.207
Coefficient of variation (CV)0.0263 0.0237
Min–max range of strain means8.03   –   8.82   cm 8.26   –   9.08   cm
Mean sample size per strain9.9   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 14.1568 14.1568 305.9606 < 0.0001
strain 27 23.7168 0.8784 18.9842 < 0.0001
sex:strain 27 2.7677 0.1025 2.2154 0.0005
Residuals 498 23.0425 0.0463


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 8.41 0.155   8 0.0549 0.0185 8.1, 8.6 -0.02
B6.PWD-Chr1 m 8.94 0.0916   8 0.0324 0.0103 8.8, 9.1 0.99
B6.PWD-Chr10.1 f 8.78 0.336   12 0.097 0.0383 8.0, 9.1 1.65
B6.PWD-Chr10.1 m 9.0 0.205   10 0.065 0.0228 8.5, 9.2 1.28
B6.PWD-Chr10.2 f 8.29 0.161   14 0.043 0.0194 8.0, 8.7 -0.56
B6.PWD-Chr10.2 m 8.76 0.15   13 0.0417 0.0171 8.4, 9.0 0.12
B6.PWD-Chr10.3 f 8.03 0.112   9 0.0373 0.0139 7.8, 8.2 -1.73
B6.PWD-Chr10.3 m 8.39 0.0991   8 0.035 0.0118 8.3, 8.5 -1.67
B6.PWD-Chr11.1 f 8.27 0.274   9 0.0913 0.0331 8.0, 8.8 -0.65
B6.PWD-Chr11.1 m 8.6 0.131   8 0.0463 0.0152 8.5, 8.8 -0.66
B6.PWD-Chr11.2 f 8.29 0.122   11 0.0368 0.0147 8.1, 8.5 -0.56
B6.PWD-Chr11.2 m 8.78 0.191   12 0.0552 0.0218 8.5, 9.0 0.21
B6.PWD-Chr11.3 f 8.27 0.142   11 0.0428 0.0172 8.1, 8.5 -0.65
B6.PWD-Chr11.3 m 8.5 0.262   8 0.0926 0.0308 8.2, 8.8 -1.14
B6.PWD-Chr12 f 8.54 0.13   8 0.046 0.0153 8.3, 8.7 0.57
B6.PWD-Chr12 m 8.8 0.0535   8 0.0189 0.00607 8.7, 8.9 0.31
B6.PWD-Chr13 f 8.39 0.259   8 0.0915 0.0309 8.1, 8.8 -0.11
B6.PWD-Chr13 m 8.76 0.185   8 0.0653 0.0211 8.4, 8.9 0.12
B6.PWD-Chr14 f 8.4 0.185   8 0.0655 0.022 8.1, 8.6 -0.06
B6.PWD-Chr14 m 8.58 0.104   8 0.0366 0.0121 8.5, 8.8 -0.75
B6.PWD-Chr15 f 8.64 0.13   8 0.046 0.0151 8.5, 8.8 1.02
B6.PWD-Chr15 m 8.93 0.149   8 0.0526 0.0167 8.7, 9.1 0.94
B6.PWD-Chr16 f 8.5 0.302   8 0.107 0.0356 7.8, 8.8 0.39
B6.PWD-Chr16 m 8.73 0.175   8 0.062 0.0201 8.5, 9.0 -0.03
B6.PWD-Chr17 f 8.61 0.22   9 0.0735 0.0256 8.2, 8.8 0.88
B6.PWD-Chr17 m 9.0 0.291   10 0.0919 0.0323 8.7, 9.5 1.28
B6.PWD-Chr18 f 8.74 0.207   9 0.0689 0.0237 8.4, 9.0 1.47
B6.PWD-Chr18 m 8.91 0.203   9 0.0676 0.0228 8.6, 9.3 0.84
B6.PWD-Chr19 f 8.3 0.16   8 0.0567 0.0193 8.1, 8.5 -0.52
B6.PWD-Chr19 m 8.53 0.139   8 0.0491 0.0163 8.3, 8.8 -1.0
B6.PWD-Chr2 f 8.13 0.296   9 0.0986 0.0364 7.8, 8.8 -1.28
B6.PWD-Chr2 m 8.65 0.272   10 0.086 0.0314 8.0, 8.8 -0.42
B6.PWD-Chr3 f 8.11 0.253   8 0.0895 0.0312 7.7, 8.4 -1.37
B6.PWD-Chr3 m 8.29 0.155   8 0.0549 0.0187 8.1, 8.5 -2.16
B6.PWD-Chr5 f 8.8 0.205   10 0.065 0.0234 8.5, 9.2 1.74
B6.PWD-Chr5 m 8.91 0.196   14 0.0523 0.0219 8.4, 9.1 0.84
B6.PWD-Chr6 f 8.32 0.225   10 0.0712 0.0271 7.9, 8.5 -0.43
B6.PWD-Chr6 m 8.8 0.239   8 0.0845 0.0272 8.5, 9.1 0.31
B6.PWD-Chr8 f 8.4 0.141   4 0.0707 0.0168 8.2, 8.5 -0.06
B6.PWD-Chr8 m 8.76 0.114   5 0.051 0.013 8.6, 8.9 0.12
B6.PWD-Chr9 f 8.19 0.21   8 0.0743 0.0257 8.0, 8.5 -1.01
B6.PWD-Chr9 m 8.72 0.139   8 0.0491 0.0159 8.5, 8.9 -0.08
B6.PWD-ChrX.1 f 8.82 0.139   8 0.0491 0.0157 8.6, 9.0 1.83
B6.PWD-ChrX.1 m 9.08 0.219   8 0.0773 0.0241 8.8, 9.5 1.66
B6.PWD-ChrX.2 f 8.65 0.194   13 0.0538 0.0225 8.3, 9.0 1.06
B6.PWD-ChrX.2 m 8.84 0.274   9 0.0915 0.031 8.5, 9.2 0.5
B6.PWD-ChrX.3 f 8.32 0.159   17 0.0386 0.0191 8.0, 8.5 -0.43
B6.PWD-ChrX.3 m 8.89 0.0641   8 0.0227 0.00721 8.8, 9.0 0.74
B6.PWD-ChrY f 8.6 0.169   8 0.0598 0.0197 8.4, 8.9 0.84
B6.PWD-ChrY m 8.82 0.116   8 0.0412 0.0132 8.7, 9.0 0.41
B6.PWD-mt f 8.4 0.33   8 0.116 0.0392 8.0, 8.9 -0.06
B6.PWD-mt m 8.75 0.107   8 0.0378 0.0122 8.5, 8.8 0.07
C57BL/6J f 8.24 0.388   19 0.089 0.047 7.4, 8.8 -0.79
C57BL/6J m 8.63 0.219   19 0.0502 0.0253 8.3, 9.0 -0.51
PWD/PhJ f 8.16 0.244   23 0.051 0.03 7.6, 8.5 -1.15
PWD/PhJ m 8.26 0.292   22 0.0623 0.0353 7.5, 8.8 -2.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 8.4125 0.0761 8.5619 8.2631
B6.PWD-Chr1 m 8.9375 0.0761 9.0869 8.7881
B6.PWD-Chr10.1 f 8.775 0.0621 8.897 8.653
B6.PWD-Chr10.1 m 9.0 0.068 9.1336 8.8664
B6.PWD-Chr10.2 f 8.2857 0.0575 8.3987 8.1728
B6.PWD-Chr10.2 m 8.7615 0.0597 8.8788 8.6443
B6.PWD-Chr10.3 f 8.0333 0.0717 8.1742 7.8925
B6.PWD-Chr10.3 m 8.3875 0.0761 8.5369 8.2381
B6.PWD-Chr11.1 f 8.2667 0.0717 8.4075 8.1258
B6.PWD-Chr11.1 m 8.6 0.0761 8.7494 8.4506
B6.PWD-Chr11.2 f 8.2909 0.0649 8.4183 8.1635
B6.PWD-Chr11.2 m 8.775 0.0621 8.897 8.653
B6.PWD-Chr11.3 f 8.2727 0.0649 8.4002 8.1453
B6.PWD-Chr11.3 m 8.5 0.0761 8.6494 8.3506
B6.PWD-Chr12 f 8.5375 0.0761 8.6869 8.3881
B6.PWD-Chr12 m 8.8 0.0761 8.9494 8.6506
B6.PWD-Chr13 f 8.3875 0.0761 8.5369 8.2381
B6.PWD-Chr13 m 8.7625 0.0761 8.9119 8.6131
B6.PWD-Chr14 f 8.4 0.0761 8.5494 8.2506
B6.PWD-Chr14 m 8.575 0.0761 8.7244 8.4256
B6.PWD-Chr15 f 8.6375 0.0761 8.7869 8.4881
B6.PWD-Chr15 m 8.925 0.0761 9.0744 8.7756
B6.PWD-Chr16 f 8.5 0.0761 8.6494 8.3506
B6.PWD-Chr16 m 8.725 0.0761 8.8744 8.5756
B6.PWD-Chr17 f 8.6111 0.0717 8.752 8.4702
B6.PWD-Chr17 m 9.0 0.068 9.1336 8.8664
B6.PWD-Chr18 f 8.7444 0.0717 8.8853 8.6036
B6.PWD-Chr18 m 8.9111 0.0717 9.052 8.7702
B6.PWD-Chr19 f 8.3 0.0761 8.4494 8.1506
B6.PWD-Chr19 m 8.525 0.0761 8.6744 8.3756
B6.PWD-Chr2 f 8.1333 0.0717 8.2742 7.9925
B6.PWD-Chr2 m 8.65 0.068 8.7836 8.5164
B6.PWD-Chr3 f 8.1125 0.0761 8.2619 7.9631
B6.PWD-Chr3 m 8.2875 0.0761 8.4369 8.1381
B6.PWD-Chr5 f 8.8 0.068 8.9336 8.6664
B6.PWD-Chr5 m 8.9143 0.0575 9.0272 8.8013
B6.PWD-Chr6 f 8.32 0.068 8.4536 8.1864
B6.PWD-Chr6 m 8.8 0.0761 8.9494 8.6506
B6.PWD-Chr8 f 8.4 0.1076 8.6113 8.1887
B6.PWD-Chr8 m 8.76 0.0962 8.949 8.571
B6.PWD-Chr9 f 8.1875 0.0761 8.3369 8.0381
B6.PWD-Chr9 m 8.725 0.0761 8.8744 8.5756
B6.PWD-ChrX.1 f 8.825 0.0761 8.9744 8.6756
B6.PWD-ChrX.1 m 9.075 0.0761 9.2244 8.9256
B6.PWD-ChrX.2 f 8.6462 0.0597 8.7634 8.5289
B6.PWD-ChrX.2 m 8.8444 0.0717 8.9853 8.7036
B6.PWD-ChrX.3 f 8.3176 0.0522 8.4201 8.2151
B6.PWD-ChrX.3 m 8.8875 0.0761 9.0369 8.7381
B6.PWD-ChrY f 8.6 0.0761 8.7494 8.4506
B6.PWD-ChrY m 8.825 0.0761 8.9744 8.6756
B6.PWD-mt f 8.4 0.0761 8.5494 8.2506
B6.PWD-mt m 8.75 0.0761 8.8994 8.6006
C57BL/6J f 8.2421 0.0493 8.3391 8.1451
C57BL/6J m 8.6316 0.0493 8.7285 8.5346
PWD/PhJ f 8.1609 0.0449 8.249 8.0727
PWD/PhJ m 8.2636 0.0459 8.3537 8.1735


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 8.675 0.0538 8.7807 8.5693
B6.PWD-Chr10.1 both 8.8875 0.0461 8.978 8.797
B6.PWD-Chr10.2 both 8.5236 0.0414 8.605 8.4422
B6.PWD-Chr10.3 both 8.2104 0.0523 8.3131 8.1077
B6.PWD-Chr11.1 both 8.4333 0.0523 8.536 8.3307
B6.PWD-Chr11.2 both 8.533 0.0449 8.6212 8.4447
B6.PWD-Chr11.3 both 8.3864 0.05 8.4846 8.2882
B6.PWD-Chr12 both 8.6688 0.0538 8.7744 8.5631
B6.PWD-Chr13 both 8.575 0.0538 8.6807 8.4693
B6.PWD-Chr14 both 8.4875 0.0538 8.5932 8.3818
B6.PWD-Chr15 both 8.7813 0.0538 8.8869 8.6756
B6.PWD-Chr16 both 8.6125 0.0538 8.7182 8.5068
B6.PWD-Chr17 both 8.8056 0.0494 8.9026 8.7085
B6.PWD-Chr18 both 8.8278 0.0507 8.9274 8.7282
B6.PWD-Chr19 both 8.4125 0.0538 8.5182 8.3068
B6.PWD-Chr2 both 8.3917 0.0494 8.4888 8.2946
B6.PWD-Chr3 both 8.2 0.0538 8.3057 8.0943
B6.PWD-Chr5 both 8.8571 0.0445 8.9446 8.7697
B6.PWD-Chr6 both 8.56 0.051 8.6602 8.4598
B6.PWD-Chr8 both 8.58 0.0721 8.7218 8.4382
B6.PWD-Chr9 both 8.4563 0.0538 8.5619 8.3506
B6.PWD-ChrX.1 both 8.95 0.0538 9.0557 8.8443
B6.PWD-ChrX.2 both 8.7453 0.0466 8.8369 8.6537
B6.PWD-ChrX.3 both 8.6026 0.0461 8.6932 8.512
B6.PWD-ChrY both 8.7125 0.0538 8.8182 8.6068
B6.PWD-mt both 8.575 0.0538 8.6807 8.4693
C57BL/6J both 8.4368 0.0349 8.5054 8.3683
PWD/PhJ both 8.2123 0.0321 8.2753 8.1492




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA