Phenotype measure

ID, description, units MPD:27405   lean_wt   lean body tissue mass, head excluded   [g]
Data set, strains Svenson4   B6.PWD consomic w/par   28 strains     sex: both     age: 16wks
Procedure DXA
Ontology mappings


  STRAIN COMPARISON PLOT
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Svenson4 - lean body tissue mass, head excluded



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means16.4   g 21.6   g
Median of the strain means16.6   g 21.7   g
SD of the strain means± 1.69 ± 2.33
Coefficient of variation (CV)0.103 0.108
Min–max range of strain means11.5   –   20.0   g 13.4   –   24.5   g
Mean sample size per strain9.5   mice 8.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3436.4077 3436.4077 1204.723 < 0.0001
strain 27 2187.4603 81.017 28.4027 < 0.0001
sex:strain 27 235.0067 8.704 3.0514 < 0.0001
Residuals 460 1312.1253 2.8524


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 16.5 1.38   8 0.488 0.0835 14.7, 18.8 0.04
B6.PWD-Chr1 m 23.6 1.08   8 0.383 0.046 21.8, 25.6 0.84
B6.PWD-Chr10.1 f 20.0 2.46   12 0.709 0.123 15.3, 23.0 2.11
B6.PWD-Chr10.1 m 24.5 2.06   10 0.651 0.084 20.2, 27.7 1.23
B6.PWD-Chr10.2 f 16.3 1.47   14 0.392 0.0902 14.2, 19.0 -0.08
B6.PWD-Chr10.2 m 23.2 2.17   13 0.603 0.0935 19.8, 26.4 0.67
B6.PWD-Chr10.3 f 15.4 1.43   9 0.476 0.0927 14.0, 18.7 -0.61
B6.PWD-Chr10.3 m 20.7 1.16   8 0.409 0.0558 19.0, 21.9 -0.4
B6.PWD-Chr11.1 f 16.4 1.36   9 0.452 0.0828 14.4, 18.5 -0.02
B6.PWD-Chr11.1 m 20.4 2.36   8 0.835 0.116 17.6, 24.6 -0.53
B6.PWD-Chr11.2 f 17.2 0.633   11 0.191 0.0367 16.3, 18.0 0.46
B6.PWD-Chr11.2 m 22.9 1.29   12 0.373 0.0564 21.0, 25.4 0.54
B6.PWD-Chr11.3 f 17.3 1.35   11 0.408 0.0779 15.7, 20.6 0.52
B6.PWD-Chr11.3 m 21.9 1.46   8 0.517 0.0667 19.2, 23.8 0.11
B6.PWD-Chr12 f 16.6 1.51   8 0.534 0.0908 14.3, 18.7 0.1
B6.PWD-Chr12 m 20.9 0.807   8 0.285 0.0385 19.8, 22.2 -0.32
B6.PWD-Chr13 f 16.7 2.42   8 0.857 0.145 14.2, 19.7 0.16
B6.PWD-Chr13 m 21.7 1.08   8 0.381 0.0497 19.4, 22.8 0.03
B6.PWD-Chr14 f 14.8 1.3   8 0.461 0.0879 12.6, 16.5 -0.96
B6.PWD-Chr14 m 19.9 1.26   8 0.445 0.0633 17.8, 21.5 -0.74
B6.PWD-Chr15 f 14.9 0.758   8 0.268 0.0507 13.5, 16.0 -0.9
B6.PWD-Chr15 m 21.6 2.44   8 0.863 0.113 19.3, 25.8 -0.02
B6.PWD-Chr16 f 16.9 1.5   8 0.532 0.0892 14.1, 18.7 0.28
B6.PWD-Chr16 m 21.5 1.96   8 0.691 0.0908 18.8, 24.6 -0.06
B6.PWD-Chr17 f 17.2 1.68   9 0.561 0.0976 15.1, 20.3 0.46
B6.PWD-Chr17 m 23.9 3.07   10 0.97 0.128 20.6, 29.9 0.97
B6.PWD-Chr18 f 18.9 1.39   9 0.465 0.0739 16.5, 20.6 1.46
B6.PWD-Chr18 m 23.2 1.26   9 0.421 0.0546 21.8, 25.6 0.67
B6.PWD-Chr19 f 16.3 1.71   8 0.605 0.105 14.2, 19.5 -0.08
B6.PWD-Chr19 m 20.5 1.71   8 0.605 0.0837 18.1, 23.8 -0.49
B6.PWD-Chr2 f 14.7 2.96   9 0.987 0.201 12.1, 22.0 -1.02
B6.PWD-Chr2 m 20.0 2.29   10 0.726 0.115 16.3, 22.9 -0.7
B6.PWD-Chr3 f 13.4 1.03   8 0.365 0.0769 11.5, 14.5 -1.79
B6.PWD-Chr3 m 16.8 1.13   8 0.4 0.0674 14.8, 18.5 -2.08
B6.PWD-Chr5 f 17.1 1.28   10 0.405 0.0747 15.8, 19.6 0.4
B6.PWD-Chr5 m 23.1 1.98   14 0.53 0.0858 17.3, 26.3 0.63
B6.PWD-Chr6 f 15.8 1.57   10 0.496 0.0994 13.0, 17.8 -0.37
B6.PWD-Chr6 m 21.4 1.93   8 0.684 0.0904 18.8, 23.7 -0.1
B6.PWD-Chr8 f 18.6 0.974   4 0.487 0.0524 17.8, 20.0 1.28
B6.PWD-Chr8 m 23.5 2.6   5 1.16 0.11 21.3, 27.4 0.8
B6.PWD-Chr9 f 15.6 1.23   8 0.434 0.0789 13.5, 17.5 -0.49
B6.PWD-Chr9 m 20.9 1.53   8 0.539 0.073 18.6, 23.3 -0.32
B6.PWD-ChrX.1 f 17.2 0.874   8 0.309 0.0508 16.3, 18.6 0.46
B6.PWD-ChrX.1 m 23.7 1.68   8 0.594 0.071 20.6, 25.7 0.89
B6.PWD-ChrX.2 f 18.6 1.29   13 0.358 0.0692 15.8, 20.5 1.28
B6.PWD-ChrX.2 m 21.7 2.66   9 0.887 0.123 18.3, 25.3 0.03
B6.PWD-ChrX.3 f 16.9 1.4   17 0.338 0.0825 14.8, 19.7 0.28
B6.PWD-ChrX.3 m 24.1 2.0   8 0.706 0.0828 20.5, 26.0 1.06
B6.PWD-ChrY f 16.5 1.65   8 0.585 0.1 14.1, 18.8 0.04
B6.PWD-ChrY m 23.4 1.49   8 0.528 0.064 21.8, 26.1 0.76
B6.PWD-mt f 15.4 1.96   8 0.694 0.127 12.4, 18.7 -0.61
B6.PWD-mt m 20.7 2.14   8 0.758 0.104 17.9, 24.2 -0.4
C57BL/6J f 17.3 1.37   9 0.455 0.079 14.9, 18.9 0.52
C57BL/6J m 22.7 1.45   8 0.511 0.0636 21.5, 25.8 0.46
PWD/PhJ f 11.5 0.897   15 0.232 0.0778 10.2, 13.8 -2.91
PWD/PhJ m 13.4 0.824   13 0.228 0.0614 11.6, 14.8 -3.53


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 16.525 0.5971 17.6984 15.3516
B6.PWD-Chr1 m 23.55 0.5971 24.7234 22.3766
B6.PWD-Chr10.1 f 20.0083 0.4875 20.9664 19.0502
B6.PWD-Chr10.1 m 24.51 0.5341 25.5595 23.4605
B6.PWD-Chr10.2 f 16.2571 0.4514 17.1442 15.3701
B6.PWD-Chr10.2 m 23.2385 0.4684 24.159 22.3179
B6.PWD-Chr10.3 f 15.3889 0.563 16.4952 14.2826
B6.PWD-Chr10.3 m 20.7375 0.5971 21.9109 19.5641
B6.PWD-Chr11.1 f 16.4 0.563 17.5063 15.2937
B6.PWD-Chr11.1 m 20.4125 0.5971 21.5859 19.2391
B6.PWD-Chr11.2 f 17.2273 0.5092 18.228 16.2266
B6.PWD-Chr11.2 m 22.9083 0.4875 23.8664 21.9502
B6.PWD-Chr11.3 f 17.3455 0.5092 18.3462 16.3448
B6.PWD-Chr11.3 m 21.9125 0.5971 23.0859 20.7391
B6.PWD-Chr12 f 16.625 0.5971 17.7984 15.4516
B6.PWD-Chr12 m 20.9375 0.5971 22.1109 19.7641
B6.PWD-Chr13 f 16.7125 0.5971 17.8859 15.5391
B6.PWD-Chr13 m 21.7 0.5971 22.8734 20.5266
B6.PWD-Chr14 f 14.8375 0.5971 16.0109 13.6641
B6.PWD-Chr14 m 19.8875 0.5971 21.0609 18.7141
B6.PWD-Chr15 f 14.9375 0.5971 16.1109 13.7641
B6.PWD-Chr15 m 21.6125 0.5971 22.7859 20.4391
B6.PWD-Chr16 f 16.8625 0.5971 18.0359 15.6891
B6.PWD-Chr16 m 21.5375 0.5971 22.7109 20.3641
B6.PWD-Chr17 f 17.2444 0.563 18.3508 16.1381
B6.PWD-Chr17 m 23.89 0.5341 24.9395 22.8405
B6.PWD-Chr18 f 18.8556 0.563 19.9619 17.7492
B6.PWD-Chr18 m 23.1556 0.563 24.2619 22.0492
B6.PWD-Chr19 f 16.325 0.5971 17.4984 15.1516
B6.PWD-Chr19 m 20.45 0.5971 21.6234 19.2766
B6.PWD-Chr2 f 14.7111 0.563 15.8174 13.6048
B6.PWD-Chr2 m 20.01 0.5341 21.0595 18.9605
B6.PWD-Chr3 f 13.425 0.5971 14.5984 12.2516
B6.PWD-Chr3 m 16.775 0.5971 17.9484 15.6016
B6.PWD-Chr5 f 17.15 0.5341 18.1995 16.1005
B6.PWD-Chr5 m 23.1214 0.4514 24.0085 22.2344
B6.PWD-Chr6 f 15.79 0.5341 16.8395 14.7405
B6.PWD-Chr6 m 21.4 0.5971 22.5734 20.2266
B6.PWD-Chr8 f 18.575 0.8445 20.2345 16.9155
B6.PWD-Chr8 m 23.54 0.7553 25.0243 22.0557
B6.PWD-Chr9 f 15.5625 0.5971 16.7359 14.3891
B6.PWD-Chr9 m 20.8875 0.5971 22.0609 19.7141
B6.PWD-ChrX.1 f 17.2125 0.5971 18.3859 16.0391
B6.PWD-ChrX.1 m 23.675 0.5971 24.8484 22.5016
B6.PWD-ChrX.2 f 18.6308 0.4684 19.5513 17.7103
B6.PWD-ChrX.2 m 21.7111 0.563 22.8174 20.6048
B6.PWD-ChrX.3 f 16.9118 0.4096 17.7167 16.1068
B6.PWD-ChrX.3 m 24.1 0.5971 25.2734 22.9266
B6.PWD-ChrY f 16.5125 0.5971 17.6859 15.3391
B6.PWD-ChrY m 23.3625 0.5971 24.5359 22.1891
B6.PWD-mt f 15.4125 0.5971 16.5859 14.2391
B6.PWD-mt m 20.675 0.5971 21.8484 19.5016
C57BL/6J f 17.2889 0.563 18.3952 16.1826
C57BL/6J m 22.725 0.5971 23.8984 21.5516
PWD/PhJ f 11.5267 0.4361 12.3836 10.6697
PWD/PhJ m 13.4231 0.4684 14.3436 12.5026


  LEAST SQUARES MEANS (ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 20.0375 0.4222 20.8672 19.2078
B6.PWD-Chr10.1 both 22.2592 0.3616 22.9697 21.5486
B6.PWD-Chr10.2 both 19.7478 0.3253 20.387 19.1086
B6.PWD-Chr10.3 both 18.0632 0.4103 18.8696 17.2568
B6.PWD-Chr11.1 both 18.4062 0.4103 19.2126 17.5999
B6.PWD-Chr11.2 both 20.0678 0.3525 20.7605 19.3751
B6.PWD-Chr11.3 both 19.629 0.3924 20.4001 18.8579
B6.PWD-Chr12 both 18.7812 0.4222 19.611 17.9515
B6.PWD-Chr13 both 19.2062 0.4222 20.036 18.3765
B6.PWD-Chr14 both 17.3625 0.4222 18.1922 16.5328
B6.PWD-Chr15 both 18.275 0.4222 19.1047 17.4453
B6.PWD-Chr16 both 19.2 0.4222 20.0297 18.3703
B6.PWD-Chr17 both 20.5672 0.388 21.3297 19.8047
B6.PWD-Chr18 both 21.0056 0.3981 21.7878 20.2233
B6.PWD-Chr19 both 18.3875 0.4222 19.2172 17.5578
B6.PWD-Chr2 both 17.3606 0.388 18.123 16.5981
B6.PWD-Chr3 both 15.1 0.4222 15.9297 14.2703
B6.PWD-Chr5 both 20.1357 0.3496 20.8228 19.4486
B6.PWD-Chr6 both 18.595 0.4006 19.3822 17.8078
B6.PWD-Chr8 both 21.0575 0.5665 22.1707 19.9443
B6.PWD-Chr9 both 18.225 0.4222 19.0547 17.3953
B6.PWD-ChrX.1 both 20.4437 0.4222 21.2735 19.614
B6.PWD-ChrX.2 both 20.1709 0.3662 20.8905 19.4513
B6.PWD-ChrX.3 both 20.5059 0.3621 21.2174 19.7944
B6.PWD-ChrY both 19.9375 0.4222 20.7672 19.1078
B6.PWD-mt both 18.0437 0.4222 18.8735 17.214
C57BL/6J both 20.0069 0.4103 20.8133 19.2006
PWD/PhJ both 12.4749 0.32 13.1037 11.846