Phenotype measure

ID, description, units MPD:27404   total_wt   total body tissue mass, head excluded   [g]
Data set, strains Svenson4   B6.PWD consomic w/par   28 strains     sex: both     age: 16wks
Procedure DXA
Ontology mappings


  STRAIN COMPARISON PLOT
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Svenson4 - total body tissue mass, head excluded



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means20.5   g 26.9   g
Median of the strain means20.4   g 27.1   g
SD of the strain means± 2.62 ± 3.04
Coefficient of variation (CV)0.128 0.113
Min–max range of strain means13.9   –   28.3   g 16.5   –   30.1   g
Mean sample size per strain9.9   mice 9.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5256.5494 5256.5494 882.0382 < 0.0001
strain 27 5395.4978 199.8333 33.5316 < 0.0001
sex:strain 27 559.5346 20.7235 3.4774 < 0.0001
Residuals 498 2967.8551 5.9595


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6.PWD-Chr1 f 20.4 1.61   8 0.569 0.0787 18.4, 22.9 -0.05
B6.PWD-Chr1 m 29.8 1.11   8 0.392 0.0372 27.7, 31.7 0.96
B6.PWD-Chr10.1 f 28.3 5.77   12 1.67 0.204 19.9, 36.9 2.96
B6.PWD-Chr10.1 m 29.8 2.17   10 0.687 0.073 26.2, 32.8 0.96
B6.PWD-Chr10.2 f 20.3 1.75   14 0.467 0.0863 17.8, 23.4 -0.09
B6.PWD-Chr10.2 m 28.6 2.89   13 0.803 0.101 24.0, 33.1 0.56
B6.PWD-Chr10.3 f 18.8 1.97   9 0.658 0.105 17.2, 23.4 -0.66
B6.PWD-Chr10.3 m 25.6 1.98   8 0.7 0.0774 23.0, 28.4 -0.43
B6.PWD-Chr11.1 f 20.3 1.5   9 0.5 0.0738 17.9, 22.5 -0.09
B6.PWD-Chr11.1 m 24.9 2.76   8 0.977 0.111 21.6, 29.6 -0.66
B6.PWD-Chr11.2 f 21.3 0.979   11 0.295 0.0461 19.9, 22.5 0.29
B6.PWD-Chr11.2 m 27.7 1.64   12 0.474 0.0594 25.2, 31.2 0.27
B6.PWD-Chr11.3 f 21.3 1.77   11 0.534 0.0833 19.0, 25.6 0.29
B6.PWD-Chr11.3 m 28.8 2.33   8 0.824 0.0809 24.6, 31.1 0.63
B6.PWD-Chr12 f 20.5 1.83   8 0.647 0.0892 17.6, 22.9 -0.01
B6.PWD-Chr12 m 26.4 1.55   8 0.548 0.0588 23.9, 28.1 -0.16
B6.PWD-Chr13 f 22.3 4.29   8 1.52 0.193 17.6, 27.5 0.67
B6.PWD-Chr13 m 28.2 2.05   8 0.725 0.0726 25.4, 32.6 0.43
B6.PWD-Chr14 f 18.2 1.43   8 0.507 0.0788 15.8, 19.8 -0.89
B6.PWD-Chr14 m 24.5 2.07   8 0.731 0.0843 21.7, 27.2 -0.79
B6.PWD-Chr15 f 18.7 0.86   8 0.304 0.046 16.9, 19.5 -0.7
B6.PWD-Chr15 m 25.8 2.33   8 0.825 0.0903 23.3, 29.9 -0.36
B6.PWD-Chr16 f 21.4 2.53   8 0.895 0.118 17.6, 24.5 0.33
B6.PWD-Chr16 m 26.7 2.93   8 1.04 0.11 22.2, 31.2 -0.06
B6.PWD-Chr17 f 20.9 1.83   9 0.61 0.0874 18.5, 23.7 0.14
B6.PWD-Chr17 m 28.5 3.58   10 1.13 0.126 24.9, 34.6 0.53
B6.PWD-Chr18 f 23.5 1.63   9 0.542 0.0692 20.7, 25.7 1.13
B6.PWD-Chr18 m 29.9 2.87   9 0.958 0.0962 27.4, 36.4 0.99
B6.PWD-Chr19 f 20.0 2.1   8 0.742 0.105 17.7, 24.2 -0.2
B6.PWD-Chr19 m 25.6 2.57   8 0.908 0.1 22.2, 30.6 -0.43
B6.PWD-Chr2 f 18.0 3.13   9 1.04 0.174 15.2, 25.8 -0.97
B6.PWD-Chr2 m 24.3 2.4   10 0.76 0.0988 20.6, 27.9 -0.85
B6.PWD-Chr3 f 16.8 1.09   8 0.385 0.065 14.8, 18.0 -1.42
B6.PWD-Chr3 m 20.7 1.37   8 0.485 0.0663 18.2, 22.7 -2.04
B6.PWD-Chr5 f 21.0 1.47   10 0.465 0.07 19.4, 23.5 0.18
B6.PWD-Chr5 m 30.0 3.26   14 0.871 0.109 21.8, 35.1 1.02
B6.PWD-Chr6 f 19.9 2.04   10 0.645 0.102 16.7, 23.2 -0.24
B6.PWD-Chr6 m 26.9 2.84   8 1.0 0.106 23.1, 30.2 0.0
B6.PWD-Chr8 f 24.6 1.61   4 0.806 0.0656 22.8, 26.0 1.55
B6.PWD-Chr8 m 29.9 3.86   5 1.73 0.129 25.5, 35.2 0.99
B6.PWD-Chr9 f 19.6 1.63   8 0.575 0.0828 16.7, 22.0 -0.36
B6.PWD-Chr9 m 26.0 2.28   8 0.806 0.0876 22.9, 30.0 -0.29
B6.PWD-ChrX.1 f 21.4 1.05   8 0.371 0.0489 20.1, 23.0 0.33
B6.PWD-ChrX.1 m 29.1 2.49   8 0.882 0.0856 25.1, 33.4 0.73
B6.PWD-ChrX.2 f 23.7 2.15   13 0.595 0.0907 19.4, 28.1 1.21
B6.PWD-ChrX.2 m 27.4 4.02   9 1.34 0.147 22.6, 33.4 0.17
B6.PWD-ChrX.3 f 21.4 2.4   17 0.583 0.113 18.1, 26.5 0.33
B6.PWD-ChrX.3 m 30.1 2.0   8 0.708 0.0666 26.9, 32.0 1.06
B6.PWD-ChrY f 20.7 2.57   8 0.908 0.124 17.3, 25.5 0.06
B6.PWD-ChrY m 29.5 1.95   8 0.688 0.066 26.8, 32.8 0.86
B6.PWD-mt f 19.1 2.46   8 0.869 0.129 15.4, 23.6 -0.55
B6.PWD-mt m 25.9 3.57   8 1.26 0.138 22.1, 31.6 -0.33
C57BL/6J f 18.7 2.76   19 0.633 0.148 14.2, 23.4 -0.7
C57BL/6J m 25.9 3.1   19 0.712 0.12 22.4, 34.7 -0.33
PWD/PhJ f 13.9 1.03   23 0.214 0.0739 12.7, 16.8 -2.53
PWD/PhJ m 16.5 1.31   22 0.279 0.0795 13.4, 18.6 -3.42


  LEAST SQUARES MEANS (ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 f 20.4488 0.8631 22.1445 18.753
B6.PWD-Chr1 m 29.785 0.8631 31.4808 28.0892
B6.PWD-Chr10.1 f 28.2508 0.7047 29.6354 26.8662
B6.PWD-Chr10.1 m 29.756 0.772 31.2727 28.2393
B6.PWD-Chr10.2 f 20.2529 0.6524 21.5347 18.971
B6.PWD-Chr10.2 m 28.5754 0.6771 29.9057 27.2451
B6.PWD-Chr10.3 f 18.8311 0.8137 20.4299 17.2323
B6.PWD-Chr10.3 m 25.6012 0.8631 27.297 23.9055
B6.PWD-Chr11.1 f 20.31 0.8137 21.9088 18.7112
B6.PWD-Chr11.1 m 24.9025 0.8631 26.5983 23.2067
B6.PWD-Chr11.2 f 21.2555 0.7361 22.7016 19.8093
B6.PWD-Chr11.2 m 27.6683 0.7047 29.0529 26.2837
B6.PWD-Chr11.3 f 21.2582 0.7361 22.7043 19.812
B6.PWD-Chr11.3 m 28.7887 0.8631 30.4845 27.093
B6.PWD-Chr12 f 20.5 0.8631 22.1958 18.8042
B6.PWD-Chr12 m 26.3988 0.8631 28.0945 24.703
B6.PWD-Chr13 f 22.2762 0.8631 23.972 20.5805
B6.PWD-Chr13 m 28.2325 0.8631 29.9283 26.5367
B6.PWD-Chr14 f 18.195 0.8631 19.8908 16.4992
B6.PWD-Chr14 m 24.54 0.8631 26.2358 22.8442
B6.PWD-Chr15 f 18.6988 0.8631 20.3945 17.003
B6.PWD-Chr15 m 25.8463 0.8631 27.542 24.1505
B6.PWD-Chr16 f 21.4112 0.8631 23.107 19.7155
B6.PWD-Chr16 m 26.7125 0.8631 28.4083 25.0167
B6.PWD-Chr17 f 20.9311 0.8137 22.5299 19.3323
B6.PWD-Chr17 m 28.516 0.772 30.0327 26.9993
B6.PWD-Chr18 f 23.5078 0.8137 25.1066 21.909
B6.PWD-Chr18 m 29.8622 0.8137 31.461 28.2634
B6.PWD-Chr19 f 20.0312 0.8631 21.727 18.3355
B6.PWD-Chr19 m 25.55 0.8631 27.2458 23.8542
B6.PWD-Chr2 f 17.9733 0.8137 19.5721 16.3745
B6.PWD-Chr2 m 24.322 0.772 25.8387 22.8053
B6.PWD-Chr3 f 16.7512 0.8631 18.447 15.0555
B6.PWD-Chr3 m 20.6887 0.8631 22.3845 18.993
B6.PWD-Chr5 f 20.994 0.772 22.5107 19.4773
B6.PWD-Chr5 m 29.9586 0.6524 31.2405 28.6767
B6.PWD-Chr6 f 19.915 0.772 21.4317 18.3983
B6.PWD-Chr6 m 26.8887 0.8631 28.5845 25.193
B6.PWD-Chr8 f 24.57 1.2206 26.9682 22.1718
B6.PWD-Chr8 m 29.884 1.0917 32.029 27.739
B6.PWD-Chr9 f 19.6362 0.8631 21.332 17.9405
B6.PWD-Chr9 m 26.0262 0.8631 27.722 24.3305
B6.PWD-ChrX.1 f 21.425 0.8631 23.1208 19.7292
B6.PWD-ChrX.1 m 29.1212 0.8631 30.817 27.4255
B6.PWD-ChrX.2 f 23.6662 0.6771 24.9964 22.3359
B6.PWD-ChrX.2 m 27.3511 0.8137 28.9499 25.7523
B6.PWD-ChrX.3 f 21.3718 0.5921 22.5351 20.2085
B6.PWD-ChrX.3 m 30.105 0.8631 31.8008 28.4092
B6.PWD-ChrY f 20.7012 0.8631 22.397 19.0055
B6.PWD-ChrY m 29.5112 0.8631 31.207 27.8155
B6.PWD-mt f 19.0775 0.8631 20.7733 17.3817
B6.PWD-mt m 25.865 0.8631 27.5608 24.1692
C57BL/6J f 18.6721 0.5601 19.7725 17.5717
C57BL/6J m 25.8616 0.5601 26.9619 24.7612
PWD/PhJ f 13.877 0.509 14.8771 12.8768
PWD/PhJ m 16.4818 0.5205 17.5044 15.4592


  LEAST SQUARES MEANS (ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
B6.PWD-Chr1 both 25.1169 0.6103 26.316 23.9178
B6.PWD-Chr10.1 both 29.0034 0.5226 30.0303 27.9766
B6.PWD-Chr10.2 both 24.4141 0.4701 25.3378 23.4904
B6.PWD-Chr10.3 both 22.2162 0.5931 23.3815 21.0509
B6.PWD-Chr11.1 both 22.6062 0.5931 23.7716 21.4409
B6.PWD-Chr11.2 both 24.4619 0.5095 25.463 23.4608
B6.PWD-Chr11.3 both 25.0235 0.5672 26.1378 23.9091
B6.PWD-Chr12 both 23.4494 0.6103 24.6485 22.2503
B6.PWD-Chr13 both 25.2544 0.6103 26.4535 24.0553
B6.PWD-Chr14 both 21.3675 0.6103 22.5666 20.1684
B6.PWD-Chr15 both 22.2725 0.6103 23.4716 21.0734
B6.PWD-Chr16 both 24.0619 0.6103 25.261 22.8628
B6.PWD-Chr17 both 24.7236 0.5608 25.8254 23.6217
B6.PWD-Chr18 both 26.685 0.5754 27.8155 25.5545
B6.PWD-Chr19 both 22.7906 0.6103 23.9897 21.5915
B6.PWD-Chr2 both 21.1477 0.5608 22.2496 20.0458
B6.PWD-Chr3 both 18.72 0.6103 19.9191 17.5209
B6.PWD-Chr5 both 25.4763 0.5054 26.4692 24.4833
B6.PWD-Chr6 both 23.4019 0.579 24.5394 22.2643
B6.PWD-Chr8 both 27.227 0.8188 28.8357 25.6183
B6.PWD-Chr9 both 22.8312 0.6103 24.0303 21.6322
B6.PWD-ChrX.1 both 25.2731 0.6103 26.4722 24.074
B6.PWD-ChrX.2 both 25.5086 0.5293 26.5486 24.4687
B6.PWD-ChrX.3 both 25.7384 0.5233 26.7666 24.7102
B6.PWD-ChrY both 25.1062 0.6103 26.3053 23.9072
B6.PWD-mt both 22.4712 0.6103 23.6703 21.2722
C57BL/6J both 22.2668 0.396 23.0449 21.4888
PWD/PhJ both 15.1794 0.364 15.8946 14.4642