Phenotype measure:   Eumorphia2   BMD_24wk

ID, description, units MPD:25914   BMD_24wk   bone mineral density (BMD)   [g/cm2]  at age 24wks
Data set, strains Eumorphia2   inbred   4 strains     sex: both
Procedure DXA
Ontology mappings

  STRAIN COMPARISON PLOT
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Eumorphia2 - bone mineral density (BMD) at age 24wks



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains4 strains
Mean of the strain means0.0597   g/cm2 0.0574   g/cm2
Median of the strain means0.0605   g/cm2 0.0585   g/cm2
SD of the strain means± 0.00674 ± 0.00571
Coefficient of variation (CV)0.113 0.0994
Min–max range of strain means0.0514   –   0.0666   g/cm2 0.0502   –   0.0624   g/cm2
Mean sample size per strain9.2   mice 8.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0 8.0159 0.0062
strain 3 0.0021 0.0007 119.3777 < 0.0001
sex:strain 3 0.0001 0.0 2.8903 0.0424
Residuals 62 0.0004 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPas f 0.0635 0.00219   10 0.000691 0.0344 0.0597, 0.0667 0.56
129S2/SvPas m 0.0624 0.002   10 0.000634 0.0321 0.0598, 0.0667 0.88
BALB/cJ f 0.0574 0.00379   7 0.00143 0.066 0.0551, 0.0658 -0.35
BALB/cJ m 0.0554 0.00106   6 0.000432 0.0191 0.0541, 0.0566 -0.35
C3HeB/FeJ f 0.0666 0.00319   10 0.00101 0.0479 0.0631, 0.072 1.02
C3HeB/FeJ m 0.0615 0.00229   10 0.000725 0.0373 0.0587, 0.0658 0.72
C57BL/6J f 0.0514 0.00192   10 0.000608 0.0375 0.0492, 0.0547 -1.24
C57BL/6J m 0.0502 0.0017   7 0.000644 0.0339 0.0487, 0.0532 -1.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas f 0.0635 0.0008 0.0651 0.062
129S2/SvPas m 0.0624 0.0008 0.0639 0.0609
BALB/cJ f 0.0574 0.0009 0.0592 0.0556
BALB/cJ m 0.0554 0.001 0.0574 0.0535
C3HeB/FeJ f 0.0666 0.0008 0.0681 0.0651
C3HeB/FeJ m 0.0615 0.0008 0.063 0.06
C57BL/6J f 0.0514 0.0008 0.0529 0.0498
C57BL/6J m 0.0502 0.0009 0.052 0.0484


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPas both 0.063 0.0005 0.064 0.0619
BALB/cJ both 0.0564 0.0007 0.0578 0.0551
C3HeB/FeJ both 0.0641 0.0005 0.0651 0.063
C57BL/6J both 0.0508 0.0006 0.052 0.0496




GWAS analysis not available: At least 12 strains are required