Project measure / variable:   Mills1   all_apoptotic_M06

ID, description, units MPD:25217   all_apoptotic_M06   all apoptotic splenocytes   [%]  at age 6mo  
Data set, strains Mills1   inbred   7 strains     sex: both     age: 26wks
Procedure apoptosis assessment
Ontology mappings

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  STRAIN COMPARISON PLOT
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Mills1 - all apoptotic splenocytes at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means11.5   % 10.2   %
Median of the strain means11.3   % 10.3   %
SD of the strain means± 3.19 ± 1.61
Coefficient of variation (CV)0.277 0.158
Min–max range of strain means8.30   –   16.4   % 7.57   –   12.5   %
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 18.006 18.006 8.2434 0.0077
strain 6 138.6467 23.1078 10.5791 < 0.0001
sex:strain 6 92.3324 15.3887 7.0452 0.0001
Residuals 28 61.16 2.1843


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 15.0 1.3   3 0.751 0.0866 13.7, 16.3 1.1
A/J m 11.3 1.57   3 0.907 0.139 10.2, 13.1 0.69
AKR/J f 8.3 1.61   3 0.929 0.194 6.5, 9.6 -1.0
AKR/J m 12.5 1.9   3 1.1 0.152 10.9, 14.6 1.44
BALB/cByJ f 9.33 1.04   3 0.601 0.112 8.5, 10.5 -0.68
BALB/cByJ m 7.57 0.751   3 0.433 0.0992 6.8, 8.3 -1.63
C57BL/6J f 8.4 0.781   3 0.451 0.093 7.9, 9.3 -0.97
C57BL/6J m 9.67 1.95   3 1.13 0.202 8.3, 11.9 -0.32
KK/HlJ f 11.3 2.94   3 1.7 0.259 9.3, 14.7 -0.06
KK/HlJ m 9.07 1.11   3 0.639 0.122 7.9, 10.1 -0.7
NZO/HlLtJ f 11.7 1.3   3 0.751 0.111 10.2, 12.5 0.07
NZO/HlLtJ m 10.3 0.862   3 0.498 0.0834 9.4, 11.1 0.07
SM/J f 16.4 1.24   3 0.717 0.0756 15.0, 17.2 1.54
SM/J m 10.9 0.577   3 0.333 0.0528 10.6, 11.6 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 15.0333 0.8533 16.7812 13.2855
A/J m 11.3 0.8533 13.0479 9.5521
AKR/J f 8.3 0.8533 10.0479 6.5521
AKR/J m 12.5 0.8533 14.2479 10.7521
BALB/cByJ f 9.3333 0.8533 11.0812 7.5855
BALB/cByJ m 7.5667 0.8533 9.3145 5.8188
C57BL/6J f 8.4 0.8533 10.1479 6.6521
C57BL/6J m 9.6667 0.8533 11.4145 7.9188
KK/HlJ f 11.3333 0.8533 13.0812 9.5855
KK/HlJ m 9.0667 0.8533 10.8145 7.3188
NZO/HlLtJ f 11.7 0.8533 13.4479 9.9521
NZO/HlLtJ m 10.3333 0.8533 12.0812 8.5855
SM/J f 16.4333 0.8533 18.1812 14.6855
SM/J m 10.9333 0.8533 12.6812 9.1855


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 13.1667 0.6034 14.4026 11.9307
AKR/J both 10.4 0.6034 11.6359 9.1641
BALB/cByJ both 8.45 0.6034 9.6859 7.2141
C57BL/6J both 9.0333 0.6034 10.2693 7.7974
KK/HlJ both 10.2 0.6034 11.4359 8.9641
NZO/HlLtJ both 11.0167 0.6034 12.2526 9.7807
SM/J both 13.6833 0.6034 14.9193 12.4474




  GWAS USING LINEAR MIXED MODELS