Project measure / variable:   Mills1   late_apoptotic_M06

ID, description, units MPD:25211   late_apoptotic_M06   late apoptotic splenocytes   [%]  at age 6mo  
Data set, strains Mills1   inbred   7 strains     sex: both     age: 26wks
Procedure apoptosis assessment
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  STRAIN COMPARISON PLOT
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Mills1 - late apoptotic splenocytes at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested7 strains7 strains
Mean of the strain means6.93   % 6.25   %
Median of the strain means6.30   % 6.73   %
SD of the strain means± 1.74 ± 0.924
Coefficient of variation (CV)0.252 0.148
Min–max range of strain means4.93   –   9.20   % 5.00   –   7.10   %
Mean sample size per strain3.0   mice 3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.801 4.801 5.0247 0.0331
strain 6 48.7062 8.1177 8.496 < 0.0001
sex:strain 6 21.4157 3.5693 3.7356 0.0074
Residuals 28 26.7533 0.9555


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J f 9.2 0.265   3 0.153 0.0288 9.0, 9.5 1.3
A/J m 6.9 1.73   3 1.0 0.251 5.8, 8.9 0.7
AKR/J f 4.93 1.25   3 0.722 0.253 3.5, 5.8 -1.15
AKR/J m 7.1 0.954   3 0.551 0.134 6.2, 8.1 0.92
BALB/cByJ f 5.4 0.529   3 0.306 0.098 5.0, 6.0 -0.88
BALB/cByJ m 5.07 0.306   3 0.176 0.0603 4.8, 5.4 -1.28
C57BL/6J f 5.8 0.866   3 0.5 0.149 5.3, 6.8 -0.65
C57BL/6J m 5.9 1.18   3 0.681 0.2 4.9, 7.2 -0.38
KK/HlJ f 6.3 1.74   3 1.01 0.277 5.1, 8.3 -0.36
KK/HlJ m 5.0 0.7   3 0.404 0.14 4.3, 5.7 -1.36
NZO/HlLtJ f 7.9 1.06   3 0.611 0.134 6.7, 8.7 0.56
NZO/HlLtJ m 7.07 0.666   3 0.384 0.0942 6.3, 7.5 0.88
SM/J f 8.97 0.451   3 0.26 0.0503 8.5, 9.4 1.17
SM/J m 6.73 0.115   3 0.0667 0.0171 6.6, 6.8 0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 9.2 0.5644 10.356 8.044
A/J m 6.9 0.5644 8.056 5.744
AKR/J f 4.9333 0.5644 6.0894 3.7773
AKR/J m 7.1 0.5644 8.256 5.944
BALB/cByJ f 5.4 0.5644 6.556 4.244
BALB/cByJ m 5.0667 0.5644 6.2227 3.9106
C57BL/6J f 5.8 0.5644 6.956 4.644
C57BL/6J m 5.9 0.5644 7.056 4.744
KK/HlJ f 6.3 0.5644 7.456 5.144
KK/HlJ m 5.0 0.5644 6.156 3.844
NZO/HlLtJ f 7.9 0.5644 9.056 6.744
NZO/HlLtJ m 7.0667 0.5644 8.2227 5.9106
SM/J f 8.9667 0.5644 10.1227 7.8106
SM/J m 6.7333 0.5644 7.8894 5.5773


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 8.05 0.3991 8.8674 7.2326
AKR/J both 6.0167 0.3991 6.8341 5.1992
BALB/cByJ both 5.2333 0.3991 6.0508 4.4159
C57BL/6J both 5.85 0.3991 6.6674 5.0326
KK/HlJ both 5.65 0.3991 6.4674 4.8326
NZO/HlLtJ both 7.4833 0.3991 8.3008 6.6659
SM/J both 7.85 0.3991 8.6674 7.0326




  GWAS USING LINEAR MIXED MODELS