Phenotype measure:   Evsikova1   vert_daily

ID, description, units MPD:24726   vert_daily   rearing activity (beam break triplets during 24h)   [n]  daily
Data set, strains Evsikova1   inbred   12 strains     sex: both     age: 26wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Evsikova1 - rearing activity (beam break triplets during 24h) daily



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means6006   n 4104   n
Median of the strain means4464   n 2742   n
SD of the strain means± 4167 ± 3572
Coefficient of variation (CV)0.694 0.870
Min–max range of strain means316   –   13390   n 496   –   11316   n
Mean sample size per strain7.0   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4639051.5883 4639051.5883 0.3655 0.5466
strain 9 1844026484.1576 204891831.5731 16.1441 < 0.0001
sex:strain 9 216812054.9186 24090228.3243 1.8982 0.0584
Residuals 120 1522969449.8712 12691412.0823


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 316.0 345.0   8 122.0 1.09 10.0, 917.0 -1.37
129S1/SvImJ m 496.0 215.0   8 76.0 0.433 262.0, 813.0 -1.01
A/J f 2653.0 984.0   7 372.0 0.371 1368.0, 4079.0 -0.8
A/J m 2663.0 942.0   5 421.0 0.354 1670.0, 4044.0 -0.4
AKR/J f 2971.0 1217.0   4 609.0 0.41 1553.0, 4290.0 -0.73
AKR/J m 1315.0 634.0   4 317.0 0.482 488.0, 1927.0 -0.78
BALB/cByJ f 9604.0 5292.0   8 1871.0 0.551 4949.0, 21273.0 0.86
BALB/cByJ m 4952.0 958.0   8 339.0 0.193 3636.0, 6315.0 0.24
BTBR T+ Itpr3tf/J f 13390.0 3546.0   4 1773.0 0.265 9088.0, 16653.0 1.77
BTBR T+ Itpr3tf/J m 11316.0 5806.0   12 1676.0 0.513 4796.0, 25073.0 2.02
BUB/BnJ f 4954.0 2223.0   7 840.0 0.449 1179.0, 7275.0 -0.25
BUB/BnJ m 1522.0 423.0   6 173.0 0.278 1107.0, 2186.0 -0.72
C3H/HeJ m 2087.0 553.0   8 196.0 0.265 1077.0, 2564.0 -0.56
C57BL/10J f 7517.0 4060.0   8 1436.0 0.54 3678.0, 13910.0 0.36
C57BL/6J f 3975.0 1347.0   8 476.0 0.339 2274.0, 6053.0 -0.49
C57BL/6J m 2822.0 980.0   7 371.0 0.347 1753.0, 4703.0 -0.36
C57BLKS/J f 3185.0 811.0   8 287.0 0.255 2050.0, 4190.0 -0.68
C57BLKS/J m 3422.0 2509.0   13 696.0 0.733 1216.0, 10362.0 -0.19
C57BR/cdJ f 10966.0 8481.0   8 2999.0 0.773 2163.0, 28551.0 1.19
C57BR/cdJ m 7670.0 4235.0   6 1729.0 0.552 3136.0, 13779.0 1.0
C57L/J f 2365.0 1631.0   2   1153.0 0.689 1212.0, 3518.0 -0.87
C57L/J m 9699.0 5335.0   7 2016.0 0.55 5000.0, 19598.0 1.57
CAST/EiJ f 10175.0 5570.0   8 1969.0 0.547 2457.0, 20294.0 1.0
CBA/J m 1290.0 261.0   5 117.0 0.203 975.0, 1657.0 -0.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 316.375 1259.5342 2810.1651 0.0
129S1/SvImJ m 496.375 1259.5342 2990.1651 0.0
A/J f 2653.1429 1346.4987 5319.1167 0.0
A/J m 2663.4 1593.1988 5817.8227 0.0
AKR/J f 2970.75 1781.2504 6497.5018 0.0
AKR/J m 1314.75 1781.2504 4841.5018 0.0
BALB/cByJ f 9603.5 1259.5342 12097.2901 7109.7099
BALB/cByJ m 4951.5 1259.5342 7445.2901 2457.7099
BTBR T+ Itpr3tf/J f 13390.5 1781.2504 16917.2518 9863.7482
BTBR T+ Itpr3tf/J m 11316.25 1028.4054 13352.4211 9280.0789
BUB/BnJ f 4954.2857 1346.4987 7620.2595 2288.3119
BUB/BnJ m 1521.5 1454.3849 4401.0808 0.0
C57BL/6J f 3974.625 1259.5342 6468.4151 1480.8349
C57BL/6J m 2821.5714 1346.4987 5487.5452 155.5976
C57BLKS/J f 3184.625 1259.5342 5678.4151 690.8349
C57BLKS/J m 3421.5385 988.06 5377.8284 1465.2485
C57BR/cdJ f 10966.0 1259.5342 13459.7901 8472.2099
C57BR/cdJ m 7670.1667 1454.3849 10549.7475 4790.5858
C57L/J f 2365.0 2519.0685 7352.5803 0.0
C57L/J m 9698.8571 1346.4987 12364.8309 7032.8833


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 406.375 890.6252 2169.7509 0.0
A/J both 2658.2714 1042.9934 4723.3259 593.217
AKR/J both 2142.75 1259.5342 4636.5401 0.0
BALB/cByJ both 7277.5 890.6252 9040.8759 5514.1241
BTBR T+ Itpr3tf/J both 12353.375 1028.4054 14389.5461 10317.2039
BUB/BnJ both 3237.8929 990.9962 5199.9965 1275.7893
C57BL/6J both 3398.0982 921.8847 5223.3657 1572.8307
C57BLKS/J both 3303.0817 800.42 4887.8577 1718.3058
C57BR/cdJ both 9318.0833 961.9852 11222.747 7413.4196
C57L/J both 6031.9286 1428.1776 8859.6208 3204.2363




  GWAS USING LINEAR MIXED MODELS