Project measure / variable:   Evsikova1   horiz_Lt

ID, description, units MPD:24717   horiz_Lt   ambulatory activity (beam break triplets during 24h)   [n]  light  
Data set, strains Evsikova1   inbred   14 strains     sex: both     age: 26wks
Procedure monitoring system
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  STRAIN COMPARISON PLOT
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Evsikova1 - ambulatory activity (beam break triplets during 24h) light



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested12 strains12 strains
Mean of the strain means10233   n 7818   n
Median of the strain means8569   n 7283   n
SD of the strain means± 5043 ± 2442
Coefficient of variation (CV)0.493 0.312
Min–max range of strain means4675   –   20592   n 4386   –   11022   n
Mean sample size per strain7.0   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 31017816.5718 31017816.5718 3.5722 0.0612
strain 9 1256712882.8882 139634764.7654 16.0812 < 0.0001
sex:strain 9 187296397.5904 20810710.8434 2.3967 0.0156
Residuals 120 1041974012.6924 8683116.7724


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4815.0 1260.0   8 445.0 0.262 3450.0, 7002.0 -1.07
129S1/SvImJ m 4386.0 2203.0   8 779.0 0.502 2225.0, 8680.0 -1.41
A/J f 4675.0 1050.0   7 397.0 0.224 3141.0, 6500.0 -1.1
A/J m 5859.0 1066.0   5 477.0 0.182 4860.0, 7532.0 -0.8
AKR/J f 7974.0 3410.0   4 1705.0 0.428 3067.0, 10615.0 -0.45
AKR/J m 7183.0 828.0   4 414.0 0.115 6189.0, 8210.0 -0.26
BALB/cByJ f 15228.0 3177.0   8 1123.0 0.209 9431.0, 20805.0 0.99
BALB/cByJ m 10431.0 1971.0   8 697.0 0.189 8807.0, 14911.0 1.07
BTBR T+ Itpr3tf/J f 11244.0 4076.0   4 2038.0 0.362 5686.0, 14454.0 0.2
BTBR T+ Itpr3tf/J m 9378.0 3031.0   12 875.0 0.323 6115.0, 15152.0 0.64
BUB/BnJ f 9164.0 1368.0   7 517.0 0.149 7659.0, 11216.0 -0.21
BUB/BnJ m 10180.0 1341.0   6 547.0 0.132 8085.0, 11814.0 0.97
C3H/HeJ m 7383.0 1641.0   8 580.0 0.222 4814.0, 9656.0 -0.18
C57BL/10J f 20592.0 6142.0   8 2171.0 0.298 13386.0, 29066.0 2.05
C57BL/6J f 6744.0 1678.0   8 593.0 0.249 4400.0, 9095.0 -0.69
C57BL/6J m 7135.0 1672.0   7 632.0 0.234 5159.0, 9392.0 -0.28
C57BLKS/J f 6650.0 1111.0   8 393.0 0.167 4607.0, 8113.0 -0.71
C57BLKS/J m 5401.0 1771.0   13 491.0 0.328 2164.0, 7618.0 -0.99
C57BR/cdJ f 15218.0 6680.0   8 2362.0 0.439 6045.0, 24789.0 0.99
C57BR/cdJ m 10728.0 4353.0   6 1777.0 0.406 5627.0, 16413.0 1.19
C57L/J f 6370.0 984.0   2   695.0 0.154 5674.0, 7065.0 -0.77
C57L/J m 11022.0 5612.0   7 2121.0 0.509 3578.0, 20796.0 1.31
CAST/EiJ f 14124.0 6875.0   8 2431.0 0.487 6992.0, 26447.0 0.77
CBA/J m 4731.0 1106.0   5 495.0 0.234 3530.0, 6499.0 -1.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4815.0 1041.8203 6877.7317 2752.2683
129S1/SvImJ m 4385.5 1041.8203 6448.2317 2322.7683
A/J f 4675.2857 1113.7528 6880.4387 2470.1327
A/J m 5859.2 1317.8101 8468.3722 3250.0278
AKR/J f 7974.25 1473.3564 10891.3932 5057.1068
AKR/J m 7183.0 1473.3564 10100.1432 4265.8568
BALB/cByJ f 15228.25 1041.8203 17290.9817 13165.5183
BALB/cByJ m 10430.625 1041.8203 12493.3567 8367.8933
BTBR T+ Itpr3tf/J f 11244.5 1473.3564 14161.6432 8327.3568
BTBR T+ Itpr3tf/J m 9378.25 850.6427 11062.4634 7694.0366
BUB/BnJ f 9163.5714 1113.7528 11368.7244 6958.4184
BUB/BnJ m 10180.5 1202.9905 12562.3375 7798.6625
C57BL/6J f 6743.625 1041.8203 8806.3567 4680.8933
C57BL/6J m 7134.5714 1113.7528 9339.7244 4929.4184
C57BLKS/J f 6650.375 1041.8203 8713.1067 4587.6433
C57BLKS/J m 5401.3846 817.2711 7019.5245 3783.2447
C57BR/cdJ f 15217.5 1041.8203 17280.2317 13154.7683
C57BR/cdJ m 10728.1667 1202.9905 13110.0041 8346.3292
C57L/J f 6369.5 2083.6407 10494.9635 2244.0365
C57L/J m 11022.0 1113.7528 13227.153 8816.847


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 4600.25 736.6782 6058.8216 3141.6784
A/J both 5267.2429 862.7092 6975.347 3559.1387
AKR/J both 7578.625 1041.8203 9641.3567 5515.8933
BALB/cByJ both 12829.4375 736.6782 14288.0091 11370.8659
BTBR T+ Itpr3tf/J both 10311.375 850.6427 11995.5884 8627.1616
BUB/BnJ both 9672.0357 819.6999 11294.9844 8049.0871
C57BL/6J both 6939.0982 762.5344 8448.8633 5429.3332
C57BLKS/J both 6025.8798 662.0653 7336.723 4715.0367
C57BR/cdJ both 12972.8333 795.7034 14548.2707 11397.3959
C57L/J both 8695.75 1181.3132 11034.668 6356.832




  GWAS USING LINEAR MIXED MODELS