Project measure / variable:   Peters4   Plt_M18

ID, description, units MPD:24395   Plt_M18   platelet count (PLT; units per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - platelet count (PLT; units per volume x 103) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means1097   n/µL 1561   n/µL
Median of the strain means1105   n/µL 1406   n/µL
SD of the strain means± 268 ± 507
Coefficient of variation (CV)0.244 0.325
Min–max range of strain means376   –   1685   n/µL 550   –   2598   n/µL
Mean sample size per strain7.0   mice 7.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17878245.9061 17878245.9061 105.821 < 0.0001
strain 26 55459211.3585 2133046.5907 12.6255 < 0.0001
sex:strain 26 12037865.8338 462994.8398 2.7405 < 0.0001
Residuals 337 56935486.8607 168948.0322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1122.0 136.0   8 48.1 0.121 937.0, 1335.0 0.09
129S1/SvImJ m 1324.0 129.0   7 48.8 0.0974 1165.0, 1582.0 -0.47
A/J f 894.0 433.0   7 164.0 0.484 110.0, 1547.0 -0.76
A/J m 1147.0 586.0   15 151.0 0.511 229.0, 2721.0 -0.82
BALB/cByJ f 824.0 235.0   8 83.2 0.286 337.0, 1077.0 -1.02
BALB/cByJ m 980.0 190.0   7 71.9 0.194 683.0, 1205.0 -1.15
BTBR T+ Itpr3tf/J f 1448.0 634.0   8 224.0 0.438 625.0, 2374.0 1.31
BTBR T+ Itpr3tf/J m 2598.0 1195.0   6 488.0 0.46 1643.0, 4759.0 2.04
BUB/BnJ f 1159.0 188.0   5 83.9 0.162 901.0, 1411.0 0.23
BUB/BnJ m 1307.0 109.0   6 44.5 0.0834 1161.0, 1418.0 -0.5
C3H/HeJ f 1352.0 175.0   7 66.1 0.129 1176.0, 1681.0 0.95
C3H/HeJ m 1433.0 406.0   8 143.0 0.283 525.0, 1794.0 -0.25
C57BL/10J f 1075.0 492.0   7 186.0 0.458 74.0, 1600.0 -0.08
C57BL/10J m 2299.0 678.0   13 188.0 0.295 939.0, 3341.0 1.46
C57BL/6J f 1402.0 337.0   7 127.0 0.24 804.0, 1822.0 1.14
C57BL/6J m 2399.0 345.0   7 130.0 0.144 2049.0, 3018.0 1.65
C57BLKS/J m 1540.0 243.0   16 60.6 0.158 827.0, 1831.0 -0.04
C57BR/cdJ f 1353.0 193.0   8 68.3 0.143 1029.0, 1662.0 0.95
C57BR/cdJ m 1356.0 304.0   8 107.0 0.224 737.0, 1662.0 -0.41
C57L/J f 1145.0 195.0   7 73.8 0.171 781.0, 1401.0 0.18
C57L/J m 1433.0 434.0   7 164.0 0.303 574.0, 1952.0 -0.25
CAST/EiJ f 1027.0 215.0   8 76.1 0.21 689.0, 1357.0 -0.26
CBA/J f 1088.0 141.0   2   100.0 0.13 988.0, 1188.0 -0.03
CBA/J m 1360.0 70.3   5 31.4 0.0517 1293.0, 1464.0 -0.4
DBA/2J f 1155.0 126.0   6 51.4 0.109 1023.0, 1309.0 0.22
DBA/2J m 1392.0 238.0   6 97.0 0.171 1176.0, 1848.0 -0.33
FVB/NJ f 1180.0 222.0   7 83.9 0.188 824.0, 1454.0 0.31
FVB/NJ m 2399.0 839.0   12 242.0 0.35 1303.0, 4641.0 1.65
KK/HlJ f 376.0 101.0   6 41.3 0.269 284.0, 537.0 -2.69
KK/HlJ m 550.0 129.0   7 48.9 0.235 468.0, 838.0 -1.99
LP/J m 2125.0 257.0   8 90.7 0.121 1668.0, 2435.0 1.11
MRL/MpJ f 1222.0 230.0   7 87.0 0.188 980.0, 1538.0 0.47
MRL/MpJ m 1653.0 371.0   8 131.0 0.225 1178.0, 2434.0 0.18
NOD.B10Sn-H2b/J f 870.0 426.0   6 174.0 0.49 262.0, 1463.0 -0.85
NOD.B10Sn-H2b/J m 1406.0 241.0   7 91.2 0.172 1163.0, 1912.0 -0.31
NON/ShiLtJ f 902.0 210.0   5 94.0 0.233 531.0, 1029.0 -0.73
NON/ShiLtJ m 1304.0 235.0   8 83.1 0.18 1024.0, 1724.0 -0.51
NZO/HlLtJ f 1539.0 550.0   10 174.0 0.357 563.0, 2281.0 1.65
NZO/HlLtJ m 2335.0 491.0   2   347.0 0.21 1988.0, 2682.0 1.53
NZW/LacJ f 1187.0 308.0   7 116.0 0.259 659.0, 1559.0 0.34
NZW/LacJ m 1752.0 143.0   6 58.4 0.0817 1618.0, 1997.0 0.38
P/J f 834.0 166.0   7 62.9 0.199 619.0, 1089.0 -0.98
P/J m 1175.0 318.0   5 142.0 0.27 672.0, 1517.0 -0.76
PL/J f 1052.0 434.0   9 145.0 0.413 335.0, 1742.0 -0.17
PL/J m 1535.0 428.0   9 143.0 0.279 488.0, 1983.0 -0.05
PWD/PhJ f 777.0 266.0   6 109.0 0.342 267.0, 995.0 -1.2
PWD/PhJ m 1138.0 201.0   7 76.1 0.177 963.0, 1563.0 -0.84
RIIIS/J f 1241.0 246.0   8 86.9 0.198 844.0, 1564.0 0.54
RIIIS/J m 1425.0 152.0   8 53.7 0.107 1132.0, 1656.0 -0.27
SJL/J f 1014.0 513.0   7 194.0 0.507 34.0, 1637.0 -0.31
SJL/J m 1356.0 824.0   4 412.0 0.607 137.0, 1935.0 -0.41
SM/J f 908.0 214.0   6 87.5 0.236 749.0, 1320.0 -0.71
SM/J m 1089.0 219.0   10 69.2 0.201 703.0, 1440.0 -0.93
SWR/J f 891.0 235.0   7 88.8 0.264 575.0, 1206.0 -0.77
SWR/J m 1164.0 152.0   8 53.6 0.13 986.0, 1458.0 -0.78
WSB/EiJ f 1685.0 542.0   8 192.0 0.322 681.0, 2651.0 2.19
WSB/EiJ m 2305.0 383.0   9 128.0 0.166 1745.0, 2989.0 1.47


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1121.75 145.3221 1407.6026 835.8974
129S1/SvImJ m 1324.1429 155.3558 1629.7322 1018.5536
A/J f 894.1429 155.3558 1199.7322 588.5536
A/J m 1146.6 106.1282 1355.3572 937.8428
BALB/cByJ f 823.75 145.3221 1109.6026 537.8974
BALB/cByJ m 979.5714 155.3558 1285.1607 673.9821
BTBR T+ Itpr3tf/J f 1448.0 145.3221 1733.8526 1162.1474
BTBR T+ Itpr3tf/J m 2597.6667 167.8035 2927.7408 2267.5925
BUB/BnJ f 1159.4 183.8195 1520.9781 797.8219
BUB/BnJ m 1307.1667 167.8035 1637.2408 977.0925
C3H/HeJ f 1351.8571 155.3558 1657.4464 1046.2678
C3H/HeJ m 1432.875 145.3221 1718.7276 1147.0224
C57BL/10J f 1075.2857 155.3558 1380.875 769.6964
C57BL/10J m 2299.0 114.0 2523.2412 2074.7588
C57BL/6J f 1402.2857 155.3558 1707.875 1096.6964
C57BL/6J m 2399.4286 155.3558 2705.0179 2093.8393
C57BR/cdJ f 1352.75 145.3221 1638.6026 1066.8974
C57BR/cdJ m 1356.25 145.3221 1642.1026 1070.3974
C57L/J f 1145.4286 155.3558 1451.0179 839.8393
C57L/J m 1433.0 155.3558 1738.5893 1127.4107
CBA/J f 1088.0 290.6441 1659.7052 516.2948
CBA/J m 1360.4 183.8195 1721.9781 998.8219
DBA/2J f 1155.0 167.8035 1485.0742 824.9258
DBA/2J m 1391.5 167.8035 1721.5742 1061.4258
FVB/NJ f 1180.2857 155.3558 1485.875 874.6964
FVB/NJ m 2399.1667 118.655 2632.5644 2165.769
KK/HlJ f 376.0 167.8035 706.0742 45.9258
KK/HlJ m 550.2857 155.3558 855.875 244.6964
MRL/MpJ f 1221.8571 155.3558 1527.4464 916.2678
MRL/MpJ m 1653.125 145.3221 1938.9776 1367.2724
NOD.B10Sn-H2b/J f 869.5 167.8035 1199.5742 539.4258
NOD.B10Sn-H2b/J m 1406.4286 155.3558 1712.0179 1100.8393
NON/ShiLtJ f 902.0 183.8195 1263.5781 540.4219
NON/ShiLtJ m 1303.625 145.3221 1589.4776 1017.7724
NZO/HlLtJ f 1538.7 129.98 1794.3744 1283.0256
NZO/HlLtJ m 2335.0 290.6441 2906.7052 1763.2948
NZW/LacJ f 1186.5714 155.3558 1492.1607 880.9821
NZW/LacJ m 1751.5 167.8035 2081.5742 1421.4258
P/J f 834.4286 155.3558 1140.0179 528.8393
P/J m 1174.6 183.8195 1536.1781 813.0219
PL/J f 1051.5556 137.011 1321.06 782.0511
PL/J m 1534.8889 137.011 1804.3933 1265.3845
PWD/PhJ f 776.8333 167.8035 1106.9075 446.7592
PWD/PhJ m 1138.2857 155.3558 1443.875 832.6964
RIIIS/J f 1240.875 145.3221 1526.7276 955.0224
RIIIS/J m 1425.0 145.3221 1710.8526 1139.1474
SJL/J f 1013.7143 155.3558 1319.3036 708.125
SJL/J m 1356.5 205.5164 1760.7567 952.2433
SM/J f 907.8333 167.8035 1237.9075 577.7592
SM/J m 1089.4 129.98 1345.0744 833.7256
SWR/J f 891.0 155.3558 1196.5893 585.4107
SWR/J m 1164.25 145.3221 1450.1026 878.3974
WSB/EiJ f 1685.375 145.3221 1971.2276 1399.5224
WSB/EiJ m 2305.1111 137.011 2574.6155 2035.6067


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1222.9464 106.3649 1432.1691 1013.7237
A/J both 1020.3714 94.0726 1205.4149 835.3279
BALB/cByJ both 901.6607 106.3649 1110.8834 692.438
BTBR T+ Itpr3tf/J both 2022.8333 110.9916 2241.1569 1804.5098
BUB/BnJ both 1233.2833 124.4464 1478.0729 988.4938
C3H/HeJ both 1392.3661 106.3649 1601.5888 1183.1434
C57BL/10J both 1687.1429 96.3476 1876.6613 1497.6244
C57BL/6J both 1900.8571 109.8532 2116.9414 1684.7729
C57BR/cdJ both 1354.5 102.7582 1556.6283 1152.3717
C57L/J both 1289.2143 109.8532 1505.2986 1073.13
CBA/J both 1224.2 171.9474 1562.4254 885.9746
DBA/2J both 1273.25 118.655 1506.6477 1039.8523
FVB/NJ both 1789.7262 97.7426 1981.9886 1597.4638
KK/HlJ both 463.1429 114.3388 688.0505 238.2352
MRL/MpJ both 1437.4911 106.3649 1646.7138 1228.2684
NOD.B10Sn-H2b/J both 1137.9643 114.3388 1362.8719 913.0566
NON/ShiLtJ both 1102.8125 117.1624 1333.2743 872.3507
NZO/HlLtJ both 1936.85 159.1924 2249.9859 1623.7141
NZW/LacJ both 1469.0357 114.3388 1693.9434 1244.1281
P/J both 1004.5143 120.3381 1241.2227 767.8058
PL/J both 1293.2222 96.8814 1483.7906 1102.6538
PWD/PhJ both 957.5595 114.3388 1182.4672 732.6519
RIIIS/J both 1332.9375 102.7582 1535.0658 1130.8092
SJL/J both 1185.1071 128.8142 1438.4884 931.7259
SM/J both 998.6167 106.1282 1207.3739 789.8594
SWR/J both 1027.625 106.3649 1236.8477 818.4023
WSB/EiJ both 1995.2431 99.863 2191.6765 1798.8096




  GWAS USING LINEAR MIXED MODELS