Project measure / variable:   Peters4   Plt_M12

ID, description, units MPD:24394   Plt_M12   platelet count (PLT; units per volume x 103)   [n/µL]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - platelet count (PLT; units per volume x 103) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means1130   n/µL 1435   n/µL
Median of the strain means1114   n/µL 1340   n/µL
SD of the strain means± 280 ± 507
Coefficient of variation (CV)0.248 0.354
Min–max range of strain means433   –   1740   n/µL 684   –   3329   n/µL
Mean sample size per strain7.8   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 9668042.4811 9668042.4811 70.6385 < 0.0001
strain 29 56447106.2797 1946451.9407 14.2215 < 0.0001
sex:strain 29 11035016.6074 380517.814 2.7802 < 0.0001
Residuals 395 54062259.7659 136866.4804


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1052.0 167.0   8 59.0 0.159 802.0, 1311.0 -0.28
129S1/SvImJ m 1336.0 116.0   7 43.7 0.0867 1210.0, 1490.0 -0.19
A/J f 1117.0 212.0   7 80.0 0.19 781.0, 1401.0 -0.05
A/J m 1046.0 156.0   6 63.9 0.15 822.0, 1198.0 -0.77
BALB/cByJ f 1111.0 167.0   7 63.0 0.15 899.0, 1353.0 -0.07
BALB/cByJ m 1187.0 250.0   7 94.3 0.21 826.0, 1523.0 -0.49
BTBR T+ Itpr3tf/J f 1193.0 301.0   8 107.0 0.253 536.0, 1615.0 0.22
BTBR T+ Itpr3tf/J m 1728.0 535.0   8 189.0 0.31 807.0, 2673.0 0.58
BUB/BnJ f 1278.0 232.0   7 87.9 0.182 1047.0, 1692.0 0.53
BUB/BnJ m 1345.0 378.0   6 154.0 0.281 1019.0, 2053.0 -0.18
C3H/HeJ f 877.0 198.0   8 70.0 0.226 645.0, 1189.0 -0.9
C3H/HeJ m 1127.0 316.0   8 112.0 0.28 470.0, 1344.0 -0.61
C57BL/10J f 1382.0 321.0   9 107.0 0.232 831.0, 1956.0 0.9
C57BL/10J m 1629.0 367.0   8 130.0 0.225 1039.0, 2043.0 0.38
C57BL/6J f 1229.0 191.0   7 72.3 0.156 1042.0, 1542.0 0.35
C57BL/6J m 2133.0 555.0   6 226.0 0.26 1406.0, 2828.0 1.38
C57BLKS/J f 1371.0 203.0   8 71.8 0.148 1131.0, 1776.0 0.86
C57BLKS/J m 1606.0 387.0   8 137.0 0.241 786.0, 1974.0 0.34
C57BR/cdJ f 1241.0 195.0   8 69.0 0.157 933.0, 1514.0 0.39
C57BR/cdJ m 1452.0 177.0   8 62.6 0.122 1050.0, 1596.0 0.03
C57L/J f 1082.0 45.2   8 16.0 0.0418 1010.0, 1132.0 -0.17
C57L/J m 1526.0 211.0   8 74.6 0.138 1116.0, 1771.0 0.18
CAST/EiJ f 1164.0 102.0   8 35.9 0.0873 1016.0, 1358.0 0.12
CAST/EiJ m 1326.0 385.0   6 157.0 0.29 990.0, 2010.0 -0.21
CBA/J f 1062.0 186.0   8 65.6 0.175 757.0, 1278.0 -0.24
CBA/J m 1145.0 373.0   7 141.0 0.326 415.0, 1449.0 -0.57
DBA/2J f 976.0 249.0   8 88.0 0.255 597.0, 1286.0 -0.55
DBA/2J m 1299.0 273.0   7 103.0 0.21 922.0, 1640.0 -0.27
FVB/NJ f 1428.0 90.7   8 32.1 0.0635 1321.0, 1574.0 1.06
FVB/NJ m 2011.0 500.0   8 177.0 0.249 1410.0, 2825.0 1.14
KK/HlJ f 433.0 92.0   7 34.8 0.212 312.0, 573.0 -2.49
KK/HlJ m 684.0 109.0   11 32.8 0.159 481.0, 824.0 -1.48
LP/J f 1371.0 217.0   8 76.7 0.158 1070.0, 1762.0 0.86
LP/J m 1816.0 202.0   7 76.4 0.111 1636.0, 2232.0 0.75
MRL/MpJ f 1015.0 410.0   8 145.0 0.404 365.0, 1419.0 -0.41
MRL/MpJ m 1218.0 318.0   8 113.0 0.261 750.0, 1671.0 -0.43
NOD.B10Sn-H2b/J f 939.0 198.0   8 69.8 0.21 541.0, 1133.0 -0.68
NOD.B10Sn-H2b/J m 1379.0 136.0   8 48.0 0.0985 1162.0, 1537.0 -0.11
NON/ShiLtJ f 816.0 276.0   9 91.9 0.338 373.0, 1136.0 -1.12
NON/ShiLtJ m 1040.0 130.0   7 49.1 0.125 810.0, 1203.0 -0.78
NZO/HlLtJ f 1740.0 507.0   6 207.0 0.292 934.0, 2141.0 2.17
NZO/HlLtJ m 3329.0 1953.0   6 797.0 0.587 653.0, 5729.0 3.73
NZW/LacJ f 1406.0 169.0   8 59.7 0.12 1203.0, 1614.0 0.98
NZW/LacJ m 1510.0 163.0   8 57.8 0.108 1315.0, 1743.0 0.15
P/J f 970.0 213.0   7 80.6 0.22 729.0, 1252.0 -0.57
P/J m 793.0 341.0   3 197.0 0.43 409.0, 1061.0 -1.26
PL/J f 1499.0 172.0   7 65.1 0.115 1178.0, 1686.0 1.31
PL/J m 1236.0 725.0   10 229.0 0.586 120.0, 2087.0 -0.39
PWD/PhJ f 863.0 66.7   8 23.6 0.0773 711.0, 917.0 -0.95
PWD/PhJ m 1064.0 506.0   8 179.0 0.476 162.0, 1476.0 -0.73
RIIIS/J f 1120.0 174.0   8 61.3 0.155 775.0, 1393.0 -0.04
RIIIS/J m 1652.0 182.0   7 68.7 0.11 1409.0, 1952.0 0.43
SJL/J f 898.0 169.0   7 64.0 0.189 717.0, 1138.0 -0.83
SJL/J m 1545.0 383.0   8 135.0 0.248 1041.0, 2074.0 0.22
SM/J f 689.0 398.0   8 141.0 0.577 59.0, 1098.0 -1.57
SM/J m 772.0 458.0   8 162.0 0.593 104.0, 1373.0 -1.31
SWR/J f 942.0 139.0   7 52.6 0.148 713.0, 1155.0 -0.67
SWR/J m 1094.0 320.0   8 113.0 0.292 618.0, 1652.0 -0.67
WSB/EiJ f 1643.0 303.0   9 101.0 0.185 1131.0, 2082.0 1.83
WSB/EiJ m 2008.0 261.0   8 92.3 0.13 1747.0, 2516.0 1.13


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1052.5 130.7987 1309.6487 795.3513
129S1/SvImJ m 1335.7143 139.8297 1610.6178 1060.8107
A/J f 1116.7143 139.8297 1391.6178 841.8107
A/J m 1045.5 151.0334 1342.4298 748.5702
BALB/cByJ f 1111.0 139.8297 1385.9036 836.0964
BALB/cByJ m 1186.8571 139.8297 1461.7607 911.9536
BTBR T+ Itpr3tf/J f 1192.875 130.7987 1450.0237 935.7263
BTBR T+ Itpr3tf/J m 1728.25 130.7987 1985.3987 1471.1013
BUB/BnJ f 1277.8571 139.8297 1552.7607 1002.9536
BUB/BnJ m 1345.1667 151.0334 1642.0964 1048.2369
C3H/HeJ f 876.625 130.7987 1133.7737 619.4763
C3H/HeJ m 1127.375 130.7987 1384.5237 870.2263
C57BL/10J f 1381.7778 123.3182 1624.2199 1139.3356
C57BL/10J m 1628.75 130.7987 1885.8987 1371.6013
C57BL/6J f 1229.1429 139.8297 1504.0464 954.2393
C57BL/6J m 2132.6667 151.0334 2429.5964 1835.7369
C57BLKS/J f 1371.0 130.7987 1628.1487 1113.8513
C57BLKS/J m 1606.125 130.7987 1863.2737 1348.9763
C57BR/cdJ f 1241.25 130.7987 1498.3987 984.1013
C57BR/cdJ m 1451.75 130.7987 1708.8987 1194.6013
C57L/J f 1081.75 130.7987 1338.8987 824.6013
C57L/J m 1525.75 130.7987 1782.8987 1268.6013
CAST/EiJ f 1164.0 130.7987 1421.1487 906.8513
CAST/EiJ m 1326.5 151.0334 1623.4298 1029.5702
CBA/J f 1062.0 130.7987 1319.1487 804.8513
CBA/J m 1144.7143 139.8297 1419.6178 869.8107
DBA/2J f 976.125 130.7987 1233.2737 718.9763
DBA/2J m 1299.0 139.8297 1573.9036 1024.0964
FVB/NJ f 1427.75 130.7987 1684.8987 1170.6013
FVB/NJ m 2010.625 130.7987 2267.7737 1753.4763
KK/HlJ f 433.2857 139.8297 708.1893 158.3822
KK/HlJ m 684.0 111.5455 903.2972 464.7028
LP/J f 1370.75 130.7987 1627.8987 1113.6013
LP/J m 1815.7143 139.8297 2090.6178 1540.8107
MRL/MpJ f 1015.0 130.7987 1272.1487 757.8513
MRL/MpJ m 1218.25 130.7987 1475.3987 961.1013
NOD.B10Sn-H2b/J f 939.375 130.7987 1196.5237 682.2263
NOD.B10Sn-H2b/J m 1378.875 130.7987 1636.0237 1121.7263
NON/ShiLtJ f 816.3333 123.3182 1058.7755 573.8912
NON/ShiLtJ m 1040.2857 139.8297 1315.1893 765.3822
NZO/HlLtJ f 1740.0 151.0334 2036.9298 1443.0702
NZO/HlLtJ m 3329.0 151.0334 3625.9298 3032.0702
NZW/LacJ f 1406.375 130.7987 1663.5237 1149.2263
NZW/LacJ m 1509.875 130.7987 1767.0237 1252.7263
P/J f 970.2857 139.8297 1245.1893 695.3822
P/J m 793.0 213.5934 1212.9221 373.0779
PL/J f 1498.8571 139.8297 1773.7607 1223.9536
PL/J m 1236.5 116.9899 1466.5008 1006.4992
PWD/PhJ f 863.0 130.7987 1120.1487 605.8513
PWD/PhJ m 1064.125 130.7987 1321.2737 806.9763
RIIIS/J f 1120.5 130.7987 1377.6487 863.3513
RIIIS/J m 1651.5714 139.8297 1926.475 1376.6679
SJL/J f 897.7143 139.8297 1172.6178 622.8107
SJL/J m 1544.625 130.7987 1801.7737 1287.4763
SM/J f 689.375 130.7987 946.5237 432.2263
SM/J m 771.5 130.7987 1028.6487 514.3513
SWR/J f 942.0 139.8297 1216.9036 667.0964
SWR/J m 1094.5 130.7987 1351.6487 837.3513
WSB/EiJ f 1642.5556 123.3182 1884.9977 1400.1134
WSB/EiJ m 2007.625 130.7987 2264.7737 1750.4763


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1194.1071 95.7349 1382.3207 1005.8935
A/J both 1081.1071 102.9119 1283.4307 878.7836
BALB/cByJ both 1148.9286 98.8746 1343.3147 954.5424
BTBR T+ Itpr3tf/J both 1460.5625 92.4887 1642.3941 1278.7309
BUB/BnJ both 1311.5119 102.9119 1513.8354 1109.1884
C3H/HeJ both 1002.0 92.4887 1183.8316 820.1684
C57BL/10J both 1505.2639 89.8828 1681.9725 1328.5553
C57BL/6J both 1680.9048 102.9119 1883.2283 1478.5812
C57BLKS/J both 1488.5625 92.4887 1670.3941 1306.7309
C57BR/cdJ both 1346.5 92.4887 1528.3316 1164.6684
C57L/J both 1303.75 92.4887 1485.5816 1121.9184
CAST/EiJ both 1245.25 99.8992 1441.6506 1048.8494
CBA/J both 1103.3571 95.7349 1291.5707 915.1435
DBA/2J both 1137.5625 95.7349 1325.7761 949.3489
FVB/NJ both 1719.1875 92.4887 1901.0191 1537.3559
KK/HlJ both 558.6429 89.4354 734.4718 382.8139
LP/J both 1593.2321 95.7349 1781.4457 1405.0185
MRL/MpJ both 1116.625 92.4887 1298.4566 934.7934
NOD.B10Sn-H2b/J both 1159.125 92.4887 1340.9566 977.2934
NON/ShiLtJ both 928.3095 93.2198 1111.5786 745.0405
NZO/HlLtJ both 2534.5 106.7967 2744.4611 2324.5389
NZW/LacJ both 1458.125 92.4887 1639.9566 1276.2934
P/J both 881.6429 127.6465 1132.5943 630.6914
PL/J both 1367.6786 91.1578 1546.8938 1188.4634
PWD/PhJ both 963.5625 92.4887 1145.3941 781.7309
RIIIS/J both 1386.0357 95.7349 1574.2493 1197.8221
SJL/J both 1221.1696 95.7349 1409.3832 1032.956
SM/J both 730.4375 92.4887 912.2691 548.6059
SWR/J both 1018.25 95.7349 1206.4636 830.0364
WSB/EiJ both 1825.0903 89.8828 2001.7988 1648.3817




  GWAS USING LINEAR MIXED MODELS