Project measure / variable:   Peters4   Plt_M06

ID, description, units MPD:24393   Plt_M06   platelet count (PLT; units per volume x 103)   [n/µL]  at age 6mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - platelet count (PLT; units per volume x 103) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means1074   n/µL 1106   n/µL
Median of the strain means1044   n/µL 1051   n/µL
SD of the strain means± 287 ± 221
Coefficient of variation (CV)0.267 0.199
Min–max range of strain means445   –   1815   n/µL 536   –   1438   n/µL
Mean sample size per strain7.7   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 21984.1674 21984.1674 0.3669 0.5451
strain 29 24779930.0025 854480.3449 14.2592 < 0.0001
sex:strain 29 5358248.5929 184767.1929 3.0833 < 0.0001
Residuals 395 23670277.435 59924.753


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1015.0 128.0   8 45.2 0.126 806.0, 1177.0 -0.2
129S1/SvImJ m 1048.0 129.0   12 37.3 0.123 751.0, 1191.0 -0.26
A/J f 1193.0 309.0   5 138.0 0.259 926.0, 1672.0 0.42
A/J m 904.0 199.0   8 70.3 0.22 651.0, 1256.0 -0.91
BALB/cByJ f 1135.0 182.0   6 74.1 0.16 805.0, 1331.0 0.21
BALB/cByJ m 879.0 199.0   8 70.5 0.227 579.0, 1144.0 -1.03
BTBR T+ Itpr3tf/J f 1157.0 287.0   8 102.0 0.248 625.0, 1559.0 0.29
BTBR T+ Itpr3tf/J m 1337.0 111.0   8 39.2 0.083 1211.0, 1569.0 1.05
BUB/BnJ f 1018.0 290.0   8 102.0 0.285 523.0, 1409.0 -0.19
BUB/BnJ m 1028.0 246.0   7 93.0 0.239 740.0, 1373.0 -0.35
C3H/HeJ f 1160.0 130.0   8 46.0 0.112 963.0, 1329.0 0.3
C3H/HeJ m 1161.0 102.0   8 36.0 0.0878 1025.0, 1328.0 0.25
C57BL/10J f 1058.0 172.0   8 60.9 0.163 700.0, 1290.0 -0.05
C57BL/10J m 1050.0 431.0   6 176.0 0.41 224.0, 1399.0 -0.25
C57BL/6J f 1268.0 469.0   8 166.0 0.37 631.0, 2306.0 0.68
C57BL/6J m 1156.0 500.0   7 189.0 0.432 79.0, 1671.0 0.23
C57BLKS/J f 1103.0 251.0   8 88.6 0.227 578.0, 1307.0 0.1
C57BLKS/J m 1347.0 120.0   7 45.5 0.0894 1210.0, 1487.0 1.09
C57BR/cdJ f 962.0 148.0   7 56.0 0.154 675.0, 1131.0 -0.39
C57BR/cdJ m 1179.0 64.9   8 23.0 0.0551 1088.0, 1284.0 0.33
C57L/J f 1031.0 231.0   8 81.6 0.224 533.0, 1279.0 -0.15
C57L/J m 1274.0 55.5   8 19.6 0.0435 1207.0, 1376.0 0.76
CAST/EiJ f 1151.0 297.0   10 93.8 0.258 672.0, 1850.0 0.27
CAST/EiJ m 1052.0 134.0   2   94.5 0.127 958.0, 1147.0 -0.24
CBA/J f 940.0 102.0   6 41.6 0.108 755.0, 1047.0 -0.47
CBA/J m 1330.0 290.0   8 103.0 0.218 915.0, 1810.0 1.02
DBA/2J f 970.0 252.0   7 95.1 0.259 595.0, 1261.0 -0.36
DBA/2J m 1067.0 225.0   7 85.2 0.211 624.0, 1273.0 -0.18
FVB/NJ f 1656.0 220.0   8 77.8 0.133 1370.0, 1893.0 2.03
FVB/NJ m 1429.0 504.0   7 190.0 0.352 693.0, 1956.0 1.47
KK/HlJ f 445.0 71.8   6 29.3 0.161 329.0, 541.0 -2.19
KK/HlJ m 536.0 84.4   8 29.8 0.157 361.0, 608.0 -2.58
LP/J f 1022.0 152.0   6 62.1 0.149 792.0, 1223.0 -0.18
LP/J m 1323.0 143.0   8 50.5 0.108 1154.0, 1569.0 0.98
MRL/MpJ f 613.0 460.0   8 163.0 0.751 32.0, 1262.0 -1.6
MRL/MpJ m 952.0 79.2   5 35.4 0.0832 871.0, 1083.0 -0.7
NOD.B10Sn-H2b/J f 1143.0 117.0   8 41.3 0.102 965.0, 1300.0 0.24
NOD.B10Sn-H2b/J m 998.0 241.0   8 85.2 0.242 470.0, 1250.0 -0.49
NON/ShiLtJ f 1080.0 303.0   8 107.0 0.28 447.0, 1493.0 0.02
NON/ShiLtJ m 1024.0 196.0   6 80.2 0.192 907.0, 1418.0 -0.37
NZO/HlLtJ f 1815.0 255.0   8 90.3 0.141 1340.0, 2123.0 2.58
NZO/HlLtJ m 1258.0 479.0   7 181.0 0.38 309.0, 1695.0 0.69
NZW/LacJ f 963.0 86.1   8 30.4 0.0894 872.0, 1120.0 -0.39
NZW/LacJ m 1041.0 303.0   6 124.0 0.291 485.0, 1278.0 -0.29
P/J f 1016.0 194.0   8 68.7 0.191 727.0, 1243.0 -0.2
P/J m 774.0 387.0   8 137.0 0.501 129.0, 1100.0 -1.5
PL/J f 1382.0 203.0   13 56.2 0.147 1044.0, 1655.0 1.07
PL/J m 1436.0 91.6   8 32.4 0.0638 1297.0, 1572.0 1.5
PWD/PhJ f 813.0 67.5   8 23.9 0.0831 680.0, 888.0 -0.91
PWD/PhJ m 994.0 407.0   7 154.0 0.409 136.0, 1263.0 -0.51
RIIIS/J f 1058.0 107.0   8 37.9 0.101 839.0, 1192.0 -0.05
RIIIS/J m 1438.0 91.9   8 32.5 0.0639 1319.0, 1609.0 1.51
SJL/J f 765.0 83.1   8 29.4 0.109 672.0, 881.0 -1.08
SJL/J m 988.0 85.6   8 30.2 0.0866 854.0, 1123.0 -0.53
SM/J f 953.0 158.0   6 64.6 0.166 728.0, 1200.0 -0.42
SM/J m 1013.0 133.0   8 47.1 0.132 775.0, 1230.0 -0.42
SWR/J f 686.0 169.0   8 59.9 0.247 476.0, 1019.0 -1.35
SWR/J m 771.0 241.0   8 85.4 0.313 308.0, 1115.0 -1.52
WSB/EiJ f 1640.0 228.0   10 72.0 0.139 1404.0, 2189.0 1.97
WSB/EiJ m 1386.0 455.0   7 172.0 0.328 379.0, 1676.0 1.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1014.625 86.5482 1184.7777 844.4723
129S1/SvImJ m 1047.9167 70.6663 1186.8458 908.9875
A/J f 1192.6 109.4758 1407.8281 977.3719
A/J m 903.625 86.5482 1073.7777 733.4723
BALB/cByJ f 1135.1667 99.9373 1331.6421 938.6912
BALB/cByJ m 879.375 86.5482 1049.5277 709.2223
BTBR T+ Itpr3tf/J f 1156.75 86.5482 1326.9027 986.5973
BTBR T+ Itpr3tf/J m 1337.0 86.5482 1507.1527 1166.8473
BUB/BnJ f 1017.625 86.5482 1187.7777 847.4723
BUB/BnJ m 1028.2857 92.5239 1210.1867 846.3848
C3H/HeJ f 1160.125 86.5482 1330.2777 989.9723
C3H/HeJ m 1160.875 86.5482 1331.0277 990.7223
C57BL/10J f 1058.375 86.5482 1228.5277 888.2223
C57BL/10J m 1050.3333 99.9373 1246.8088 853.8579
C57BL/6J f 1268.0 86.5482 1438.1527 1097.8473
C57BL/6J m 1156.2857 92.5239 1338.1867 974.3848
C57BLKS/J f 1103.375 86.5482 1273.5277 933.2223
C57BLKS/J m 1347.1429 92.5239 1529.0438 1165.2419
C57BR/cdJ f 962.4286 92.5239 1144.3295 780.5276
C57BR/cdJ m 1179.0 86.5482 1349.1527 1008.8473
C57L/J f 1030.625 86.5482 1200.7777 860.4723
C57L/J m 1274.5 86.5482 1444.6527 1104.3473
CAST/EiJ f 1151.0 77.4111 1303.1892 998.8108
CAST/EiJ m 1052.5 173.0964 1392.8055 712.1945
CBA/J f 939.8333 99.9373 1136.3088 743.3579
CBA/J m 1330.5 86.5482 1500.6527 1160.3473
DBA/2J f 969.5714 92.5239 1151.4724 787.6705
DBA/2J m 1067.4286 92.5239 1249.3295 885.5276
FVB/NJ f 1656.375 86.5482 1826.5277 1486.2223
FVB/NJ m 1429.4286 92.5239 1611.3295 1247.5276
KK/HlJ f 445.3333 99.9373 641.8088 248.8579
KK/HlJ m 536.375 86.5482 706.5277 366.2223
LP/J f 1021.5 99.9373 1217.9755 825.0245
LP/J m 1323.125 86.5482 1493.2777 1152.9723
MRL/MpJ f 613.0 86.5482 783.1527 442.8473
MRL/MpJ m 952.2 109.4758 1167.4281 736.9719
NOD.B10Sn-H2b/J f 1143.25 86.5482 1313.4027 973.0973
NOD.B10Sn-H2b/J m 998.0 86.5482 1168.1527 827.8473
NON/ShiLtJ f 1080.25 86.5482 1250.4027 910.0973
NON/ShiLtJ m 1023.5 99.9373 1219.9755 827.0245
NZO/HlLtJ f 1814.75 86.5482 1984.9027 1644.5973
NZO/HlLtJ m 1258.2857 92.5239 1440.1867 1076.3848
NZW/LacJ f 963.25 86.5482 1133.4027 793.0973
NZW/LacJ m 1041.0 99.9373 1237.4755 844.5245
P/J f 1015.625 86.5482 1185.7777 845.4723
P/J m 773.625 86.5482 943.7777 603.4723
PL/J f 1381.9231 67.894 1515.4019 1248.4443
PL/J m 1435.75 86.5482 1605.9027 1265.5973
PWD/PhJ f 812.75 86.5482 982.9027 642.5973
PWD/PhJ m 993.5714 92.5239 1175.4724 811.6705
RIIIS/J f 1057.5 86.5482 1227.6527 887.3473
RIIIS/J m 1438.5 86.5482 1608.6527 1268.3473
SJL/J f 765.0 86.5482 935.1527 594.8473
SJL/J m 987.875 86.5482 1158.0277 817.7223
SM/J f 952.8333 99.9373 1149.3088 756.3579
SM/J m 1012.75 86.5482 1182.9027 842.5973
SWR/J f 685.625 86.5482 855.7777 515.4723
SWR/J m 771.25 86.5482 941.4027 601.0973
WSB/EiJ f 1640.0 77.4111 1792.1892 1487.8108
WSB/EiJ m 1386.4286 92.5239 1568.3295 1204.5276


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1031.2708 55.8666 1141.104 921.4377
A/J both 1048.1125 69.7774 1185.294 910.931
BALB/cByJ both 1007.2708 66.1023 1137.2271 877.3145
BTBR T+ Itpr3tf/J both 1246.875 61.1988 1367.1912 1126.5588
BUB/BnJ both 1022.9554 63.3468 1147.4944 898.4163
C3H/HeJ both 1160.5 61.1988 1280.8162 1040.1838
C57BL/10J both 1054.3542 66.1023 1184.3105 924.3979
C57BL/6J both 1212.1429 63.3468 1336.6819 1087.6038
C57BLKS/J both 1225.2589 63.3468 1349.798 1100.7199
C57BR/cdJ both 1070.7143 63.3468 1195.2533 946.1752
C57L/J both 1152.5625 61.1988 1272.8787 1032.2463
CAST/EiJ both 1101.75 94.8088 1288.143 915.357
CBA/J both 1135.1667 66.1023 1265.123 1005.2104
DBA/2J both 1018.5 65.4243 1147.1234 889.8766
FVB/NJ both 1542.9018 63.3468 1667.4408 1418.3627
KK/HlJ both 490.8542 66.1023 620.8105 360.8979
LP/J both 1172.3125 66.1023 1302.2688 1042.3562
MRL/MpJ both 782.6 69.7774 919.7815 645.4185
NOD.B10Sn-H2b/J both 1070.625 61.1988 1190.9412 950.3088
NON/ShiLtJ both 1051.875 66.1023 1181.8313 921.9187
NZO/HlLtJ both 1536.5179 63.3468 1661.0569 1411.9788
NZW/LacJ both 1002.125 66.1023 1132.0813 872.1687
P/J both 894.625 61.1988 1014.9412 774.3088
PL/J both 1408.8365 55.0004 1516.9667 1300.7064
PWD/PhJ both 903.1607 63.3468 1027.6998 778.6217
RIIIS/J both 1248.0 61.1988 1368.3162 1127.6838
SJL/J both 876.4375 61.1988 996.7537 756.1213
SM/J both 982.7917 66.1023 1112.748 852.8354
SWR/J both 728.4375 61.1988 848.7537 608.1213
WSB/EiJ both 1513.2143 60.3182 1631.7992 1394.6294




  GWAS USING LINEAR MIXED MODELS