Project measure / variable:   Peters4   CHr_M24

ID, description, units MPD:24388   CHr_M24   reticulocyte corpuscular hemoglobin (CHr)   [pg]  at age 24mo  
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - reticulocyte corpuscular hemoglobin (CHr) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means15.6   pg 14.9   pg
Median of the strain means15.8   pg 14.9   pg
SD of the strain means± 0.594 ± 0.398
Coefficient of variation (CV)0.0381 0.0267
Min–max range of strain means14.4   –   16.3   pg 14.3   –   15.7   pg
Mean sample size per strain6.7   mice 6.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 22.2872 22.2872 35.0664 < 0.0001
strain 9 17.8136 1.9793 3.1142 0.0021
sex:strain 9 10.1111 1.1235 1.7676 0.0814
Residuals 119 75.6331 0.6356


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15.8 1.13   8 0.4 0.0716 13.1, 16.5 0.32
129S1/SvImJ m 15.0 0.726   13 0.201 0.0485 13.8, 16.3 0.25
A/J m 15.2 0.354   2   0.25 0.0232 15.0, 15.5 0.75
BALB/cByJ f 15.8 1.09   6 0.444 0.0689 14.6, 17.4 0.32
C57BL/10J f 14.4 0.862   7 0.326 0.0597 13.2, 16.1 -2.04
C57BL/10J m 14.9 0.671   8 0.237 0.045 14.0, 15.7 0.0
C57BL/6J f 15.8 0.24   6 0.098 0.0152 15.4, 16.1 0.32
C57BL/6J m 14.6 0.236   7 0.0892 0.0162 14.1, 14.8 -0.75
C57BLKS/J f 14.9 0.36   6 0.147 0.0242 14.4, 15.4 -1.19
C57BLKS/J m 14.7 0.291   7 0.11 0.0198 14.4, 15.2 -0.5
C57BR/cdJ f 15.5 0.446   7 0.169 0.0288 14.6, 15.9 -0.18
C57BR/cdJ m 14.3 1.03   6 0.419 0.0714 12.4, 15.2 -1.51
LP/J f 16.3 0.387   7 0.146 0.0238 15.7, 16.7 1.16
LP/J m 15.4 0.639   5 0.286 0.0416 14.6, 16.2 1.26
NON/ShiLtJ f 15.3 0.493   7 0.186 0.0322 14.8, 16.0 -0.52
NON/ShiLtJ m 14.5 0.712   6 0.291 0.049 13.5, 15.4 -1.01
NZW/LacJ f 16.3 2.01   7 0.76 0.123 13.7, 19.8 1.16
NZW/LacJ m 14.9 0.886   6 0.362 0.0596 13.7, 15.7 0.0
PWD/PhJ f 16.2 0.659   6 0.269 0.0408 15.3, 17.2 0.99
PWD/PhJ m 15.0 1.07   6 0.439 0.0718 13.2, 16.0 0.25
SM/J m 15.7 0.773   7 0.292 0.0492 14.5, 16.9 2.01
WSB/EiJ f 15.4 0.281   7 0.106 0.0183 14.8, 15.7 -0.35
WSB/EiJ m 14.6 0.479   7 0.181 0.0329 14.2, 15.6 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15.825 0.2819 16.3831 15.2669
129S1/SvImJ m 14.9769 0.2211 15.4147 14.5391
C57BL/10J f 14.4429 0.3013 15.0395 13.8462
C57BL/10J m 14.9125 0.2819 15.4706 14.3544
C57BL/6J f 15.8167 0.3255 16.4611 15.1722
C57BL/6J m 14.5714 0.3013 15.1681 13.9748
C57BLKS/J f 14.8833 0.3255 15.5278 14.2389
C57BLKS/J m 14.7143 0.3013 15.3109 14.1176
C57BR/cdJ f 15.4714 0.3013 16.0681 14.8748
C57BR/cdJ m 14.35 0.3255 14.9945 13.7055
LP/J f 16.3 0.3013 16.8967 15.7033
LP/J m 15.36 0.3565 16.066 14.654
NON/ShiLtJ f 15.3 0.3013 15.8967 14.7033
NON/ShiLtJ m 14.5333 0.3255 15.1778 13.8889
NZW/LacJ f 16.3143 0.3013 16.9109 15.7176
NZW/LacJ m 14.8833 0.3255 15.5278 14.2389
PWD/PhJ f 16.1667 0.3255 16.8111 15.5222
PWD/PhJ m 14.9667 0.3255 15.6111 14.3222
WSB/EiJ f 15.3714 0.3013 15.9681 14.7748
WSB/EiJ m 14.5571 0.3013 15.1538 13.9605


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.401 0.1791 15.7556 15.0463
C57BL/10J both 14.6777 0.2063 15.0862 14.2692
C57BL/6J both 15.194 0.2218 15.6332 14.7549
C57BLKS/J both 14.7988 0.2218 15.2379 14.3597
C57BR/cdJ both 14.9107 0.2218 15.3498 14.4716
LP/J both 15.83 0.2334 16.2922 15.3678
NON/ShiLtJ both 14.9167 0.2218 15.3558 14.4775
NZW/LacJ both 15.5988 0.2218 16.0379 15.1597
PWD/PhJ both 15.5667 0.2301 16.0224 15.111
WSB/EiJ both 14.9643 0.2131 15.3862 14.5424




  GWAS USING LINEAR MIXED MODELS