Project measure / variable:   Peters4   CHr_M18

ID, description, units MPD:24387   CHr_M18   reticulocyte corpuscular hemoglobin (CHr)   [pg]  at age 18mo  
Data set, strains Peters4   inbred   29 strains     sex: both     age: 78wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - reticulocyte corpuscular hemoglobin (CHr) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested25 strains28 strains
Mean of the strain means15.8   pg 15.5   pg
Median of the strain means15.7   pg 15.4   pg
SD of the strain means± 0.848 ± 0.710
Coefficient of variation (CV)0.0536 0.0458
Min–max range of strain means14.2   –   17.4   pg 14.0   –   17.3   pg
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.4886 10.4886 17.0816 < 0.0001
strain 23 177.073 7.6988 12.5382 < 0.0001
sex:strain 23 24.8062 1.0785 1.7565 0.0188
Residuals 304 186.665 0.614


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 15.2 0.481   7 0.182 0.0316 14.7, 16.1 -0.45
A/J f 15.4 0.603   7 0.228 0.0391 14.2, 16.0 -0.5
A/J m 15.3 0.544   13 0.151 0.0356 13.9, 16.1 -0.31
BALB/cByJ f 15.8 0.239   8 0.0845 0.0151 15.5, 16.2 -0.03
BALB/cByJ m 15.5 0.669   7 0.253 0.0432 14.6, 16.6 -0.03
BTBR T+ Itpr3tf/J f 15.4 0.69   8 0.244 0.0447 14.7, 16.8 -0.5
BTBR T+ Itpr3tf/J m 16.2 0.216   6 0.0882 0.0134 15.8, 16.4 0.96
BUB/BnJ f 16.6 0.339   5 0.152 0.0204 16.0, 16.8 0.92
BUB/BnJ m 16.6 0.446   6 0.182 0.0268 15.9, 17.1 1.52
C57BL/10J f 14.2 0.638   6 0.26 0.045 13.3, 14.9 -1.92
C57BL/10J m 14.8 0.328   13 0.0909 0.0221 14.3, 15.3 -1.01
C57BL/6J f 15.3 0.454   7 0.171 0.0296 14.7, 16.0 -0.62
C57BL/6J m 15.2 0.382   7 0.144 0.0252 14.6, 15.7 -0.45
C57BLKS/J m 15.1 0.245   16 0.0612 0.0162 14.4, 15.4 -0.59
C57BR/cdJ f 15.2 1.67   8 0.589 0.11 11.2, 16.7 -0.74
C57BR/cdJ m 15.2 1.82   8 0.642 0.12 12.2, 16.6 -0.45
C57L/J f 16.6 0.207   7 0.0782 0.0124 16.4, 17.0 0.92
C57L/J m 16.2 0.585   7 0.221 0.0362 15.6, 17.4 0.96
CAST/EiJ f 15.0 0.772   8 0.273 0.0516 13.7, 15.8 -0.97
CBA/J m 15.3 0.492   5 0.22 0.0321 14.5, 15.7 -0.31
DBA/2J f 14.2 0.362   6 0.148 0.0254 13.9, 14.7 -1.92
DBA/2J m 14.0 0.554   6 0.226 0.0395 13.0, 14.6 -2.14
FVB/NJ f 16.0 0.374   7 0.141 0.0233 15.7, 16.8 0.21
FVB/NJ m 15.9 0.684   12 0.198 0.0431 13.9, 16.4 0.54
KK/HlJ f 15.8 0.473   6 0.193 0.03 14.9, 16.2 -0.03
KK/HlJ m 15.6 0.635   7 0.24 0.0407 14.2, 16.0 0.12
LP/J m 16.1 0.16   8 0.0567 0.00993 15.9, 16.4 0.82
MRL/MpJ f 15.2 0.772   7 0.292 0.0507 14.1, 16.0 -0.74
MRL/MpJ m 15.1 0.595   8 0.21 0.0394 14.3, 16.1 -0.59
NOD.B10Sn-H2b/J f 16.8 0.241   7 0.0911 0.0144 16.5, 17.1 1.15
NOD.B10Sn-H2b/J m 16.3 0.458   7 0.173 0.0282 15.4, 16.8 1.1
NON/ShiLtJ f 15.4 0.581   5 0.26 0.0379 14.7, 16.0 -0.5
NON/ShiLtJ m 14.2 1.97   8 0.695 0.139 10.5, 16.1 -1.86
NZO/HlLtJ f 15.3 0.353   10 0.112 0.023 14.9, 16.0 -0.62
NZO/HlLtJ m 15.1 0.0707   2   0.05 0.00467 15.1, 15.2 -0.59
NZW/LacJ f 17.1 0.419   7 0.158 0.0246 16.3, 17.6 1.51
NZW/LacJ m 15.8 0.226   6 0.0922 0.0142 15.6, 16.2 0.4
P/J f 15.7 0.52   7 0.196 0.0331 14.8, 16.3 -0.15
P/J m 16.3 2.18   5 0.974 0.134 13.8, 19.3 1.1
PL/J f 16.0 1.56   9 0.522 0.0975 14.7, 19.8 0.21
PL/J m 15.4 1.34   9 0.445 0.0868 13.7, 18.1 -0.17
PWD/PhJ f 17.0 0.508   6 0.207 0.0298 16.2, 17.5 1.39
PWD/PhJ m 15.6 0.534   7 0.202 0.0342 14.6, 16.1 0.12
RIIIS/J f 16.7 0.748   8 0.265 0.0449 15.5, 17.6 1.03
RIIIS/J m 15.6 0.189   8 0.0666 0.0121 15.3, 15.8 0.12
SJL/J f 15.6 0.724   7 0.274 0.0465 14.6, 16.5 -0.26
SJL/J m 14.9 0.806   4 0.403 0.0542 14.0, 15.7 -0.87
SM/J f 16.6 0.273   6 0.112 0.0164 16.3, 17.0 0.92
SM/J m 15.9 0.437   10 0.138 0.0274 15.4, 16.8 0.54
SWR/J f 17.4 0.325   7 0.123 0.0187 17.0, 17.8 1.86
SWR/J m 17.3 0.225   8 0.0796 0.013 17.0, 17.7 2.51
WSB/EiJ f 15.3 0.437   8 0.154 0.0286 14.8, 15.9 -0.62
WSB/EiJ m 14.8 0.375   9 0.125 0.0252 14.3, 15.3 -1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J f 15.4 0.2962 15.9828 14.8172
A/J m 15.2846 0.2173 15.7123 14.857
BALB/cByJ f 15.8 0.277 16.3452 15.2548
BALB/cByJ m 15.4857 0.2962 16.0685 14.9029
BTBR T+ Itpr3tf/J f 15.425 0.277 15.9702 14.8798
BTBR T+ Itpr3tf/J m 16.1667 0.3199 16.7962 15.5372
BUB/BnJ f 16.6 0.3504 17.2896 15.9104
BUB/BnJ m 16.6333 0.3199 17.2628 16.0038
C57BL/10J f 14.1667 0.3199 14.7962 13.5372
C57BL/10J m 14.8308 0.2173 15.2584 14.4031
C57BL/6J f 15.3286 0.2962 15.9114 14.7458
C57BL/6J m 15.1714 0.2962 15.7542 14.5886
C57BR/cdJ f 15.1875 0.277 15.7327 14.6423
C57BR/cdJ m 15.175 0.277 15.7202 14.6298
C57L/J f 16.6429 0.2962 17.2257 16.06
C57L/J m 16.1714 0.2962 16.7542 15.5886
DBA/2J f 14.25 0.3199 14.8795 13.6205
DBA/2J m 14.0333 0.3199 14.6628 13.4038
FVB/NJ f 16.0429 0.2962 16.6257 15.46
FVB/NJ m 15.8583 0.2262 16.3035 15.4132
KK/HlJ f 15.8 0.3199 16.4295 15.1705
KK/HlJ m 15.6 0.2962 16.1828 15.0172
MRL/MpJ f 15.2429 0.2962 15.8257 14.66
MRL/MpJ m 15.1 0.277 15.6452 14.5548
NOD.B10Sn-H2b/J f 16.7857 0.2962 17.3685 16.2029
NOD.B10Sn-H2b/J m 16.2571 0.2962 16.84 15.6743
NON/ShiLtJ f 15.36 0.3504 16.0496 14.6704
NON/ShiLtJ m 14.1625 0.277 14.7077 13.6173
NZO/HlLtJ f 15.34 0.2478 15.8276 14.8524
NZO/HlLtJ m 15.15 0.5541 16.2403 14.0597
NZW/LacJ f 17.0714 0.2962 17.6542 16.4886
NZW/LacJ m 15.85 0.3199 16.4795 15.2205
P/J f 15.7 0.2962 16.2828 15.1172
P/J m 16.32 0.3504 17.0096 15.6304
PL/J f 16.0444 0.2612 16.5584 15.5305
PL/J m 15.4 0.2612 15.914 14.886
PWD/PhJ f 17.0167 0.3199 17.6462 16.3872
PWD/PhJ m 15.5857 0.2962 16.1685 15.0029
RIIIS/J f 16.6625 0.277 17.2077 16.1173
RIIIS/J m 15.5875 0.277 16.1327 15.0423
SJL/J f 15.5857 0.2962 16.1685 15.0029
SJL/J m 14.875 0.3918 15.646 14.104
SM/J f 16.6333 0.3199 17.2628 16.0038
SM/J m 15.92 0.2478 16.4076 15.4324
SWR/J f 17.4286 0.2962 18.0114 16.8458
SWR/J m 17.275 0.277 17.8202 16.7298
WSB/EiJ f 15.275 0.277 15.8202 14.7298
WSB/EiJ m 14.8444 0.2612 15.3584 14.3305


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
A/J both 15.3423 0.1837 15.7038 14.9809
BALB/cByJ both 15.6429 0.2028 16.0419 15.2438
BTBR T+ Itpr3tf/J both 15.7958 0.2116 16.2122 15.3795
BUB/BnJ both 16.6167 0.2372 17.0835 16.1498
C57BL/10J both 14.4987 0.1934 14.8792 14.1182
C57BL/6J both 15.25 0.2094 15.6621 14.8379
C57BR/cdJ both 15.1812 0.1959 15.5667 14.7958
C57L/J both 16.4071 0.2094 16.8193 15.995
DBA/2J both 14.1417 0.2262 14.5868 13.6965
FVB/NJ both 15.9506 0.1863 16.3173 15.5839
KK/HlJ both 15.7 0.218 16.1289 15.2711
MRL/MpJ both 15.1714 0.2028 15.5705 14.7724
NOD.B10Sn-H2b/J both 16.5214 0.2094 16.9335 16.1093
NON/ShiLtJ both 14.7612 0.2234 15.2008 14.3217
NZO/HlLtJ both 15.245 0.3035 15.8422 14.6478
NZW/LacJ both 16.4607 0.218 16.8897 16.0318
P/J both 16.01 0.2294 16.4614 15.5586
PL/J both 15.7222 0.1847 16.0857 15.3588
PWD/PhJ both 16.3012 0.218 16.7301 15.8723
RIIIS/J both 16.125 0.1959 16.5105 15.7395
SJL/J both 15.2304 0.2456 15.7136 14.7471
SM/J both 16.2767 0.2023 16.6748 15.8785
SWR/J both 17.3518 0.2028 17.7508 16.9528
WSB/EiJ both 15.0597 0.1904 15.4344 14.6851




  GWAS USING LINEAR MIXED MODELS