Project measure / variable:   Peters4   CHr_M12

ID, description, units MPD:24386   CHr_M12   reticulocyte corpuscular hemoglobin (CHr)   [pg]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - reticulocyte corpuscular hemoglobin (CHr) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means16.2   pg 16.0   pg
Median of the strain means16.3   pg 15.9   pg
SD of the strain means± 0.812 ± 0.809
Coefficient of variation (CV)0.0500 0.0507
Min–max range of strain means14.5   –   17.7   pg 14.0   –   17.3   pg
Mean sample size per strain7.8   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 5.7747 5.7747 20.0385 < 0.0001
strain 29 251.0028 8.6553 30.0345 < 0.0001
sex:strain 29 33.3481 1.1499 3.9904 < 0.0001
Residuals 395 113.83 0.2882


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.1 0.747   8 0.264 0.0464 14.5, 16.8 -0.18
129S1/SvImJ m 15.8 0.31   7 0.117 0.0197 15.3, 16.2 -0.19
A/J f 16.2 0.513   7 0.194 0.0316 15.4, 16.8 -0.06
A/J m 15.7 0.259   6 0.106 0.0165 15.2, 15.9 -0.31
BALB/cByJ f 16.1 0.282   7 0.107 0.0176 15.7, 16.4 -0.18
BALB/cByJ m 16.0 0.559   7 0.211 0.035 15.3, 16.8 0.06
BTBR T+ Itpr3tf/J f 17.3 0.177   8 0.0627 0.0102 17.1, 17.6 1.3
BTBR T+ Itpr3tf/J m 16.6 0.504   8 0.178 0.0304 15.7, 17.0 0.8
BUB/BnJ f 16.8 0.391   7 0.148 0.0232 16.1, 17.2 0.68
BUB/BnJ m 17.2 0.635   6 0.259 0.037 16.6, 18.4 1.54
C3H/HeJ f 17.3 0.483   8 0.171 0.028 16.5, 18.1 1.3
C3H/HeJ m 17.1 0.672   8 0.238 0.0393 16.0, 18.1 1.42
C57BL/10J f 14.7 0.335   9 0.112 0.0228 14.2, 15.1 -1.91
C57BL/10J m 15.3 0.245   8 0.0865 0.0159 14.9, 15.7 -0.81
C57BL/6J f 15.5 0.5   7 0.189 0.0323 14.5, 16.1 -0.92
C57BL/6J m 15.5 0.286   6 0.117 0.0185 15.0, 15.8 -0.56
C57BLKS/J f 15.2 0.185   8 0.0653 0.0122 14.9, 15.5 -1.29
C57BLKS/J m 15.6 0.369   8 0.131 0.0236 15.2, 16.3 -0.44
C57BR/cdJ f 15.2 1.14   8 0.402 0.0748 13.7, 16.5 -1.29
C57BR/cdJ m 15.4 0.925   8 0.327 0.0601 13.6, 16.1 -0.68
C57L/J f 17.1 0.554   8 0.196 0.0324 16.4, 18.1 1.05
C57L/J m 16.8 0.318   8 0.113 0.0189 16.5, 17.4 1.05
CAST/EiJ f 15.4 0.45   8 0.159 0.0292 14.9, 16.2 -1.04
CAST/EiJ m 14.7 0.258   6 0.105 0.0176 14.3, 15.0 -1.55
CBA/J f 16.5 0.273   8 0.0964 0.0165 16.0, 16.9 0.31
CBA/J m 16.4 0.423   7 0.16 0.0258 15.7, 16.9 0.55
DBA/2J f 14.5 0.21   8 0.0743 0.0145 14.2, 14.7 -2.15
DBA/2J m 14.5 0.346   7 0.131 0.0239 13.7, 14.7 -1.8
FVB/NJ f 16.4 0.421   8 0.149 0.0256 15.6, 16.8 0.19
FVB/NJ m 16.5 0.45   8 0.159 0.0273 15.7, 17.3 0.68
KK/HlJ f 16.1 0.782   7 0.296 0.0485 14.5, 16.7 -0.18
KK/HlJ m 15.7 0.223   11 0.0672 0.0142 15.3, 16.1 -0.31
LP/J f 16.6 0.302   8 0.107 0.0182 16.0, 16.9 0.44
LP/J m 16.4 0.237   7 0.0896 0.0144 16.1, 16.8 0.55
MRL/MpJ f 16.5 0.877   8 0.31 0.0531 14.9, 17.9 0.31
MRL/MpJ m 16.4 0.22   8 0.0779 0.0134 16.0, 16.7 0.55
NOD.B10Sn-H2b/J f 17.1 0.307   8 0.108 0.018 16.7, 17.5 1.05
NOD.B10Sn-H2b/J m 16.4 0.16   8 0.0565 0.00972 16.2, 16.7 0.55
NON/ShiLtJ f 16.1 0.296   9 0.0986 0.0183 15.7, 16.6 -0.18
NON/ShiLtJ m 16.3 0.251   7 0.0948 0.0153 16.1, 16.7 0.43
NZO/HlLtJ f 15.6 0.121   6 0.0494 0.00775 15.5, 15.8 -0.8
NZO/HlLtJ m 14.0 1.21   6 0.492 0.0859 12.4, 15.6 -2.41
NZW/LacJ f 17.0 0.275   8 0.0972 0.0162 16.6, 17.5 0.93
NZW/LacJ m 16.5 0.205   8 0.0726 0.0124 16.3, 16.8 0.68
P/J f 16.2 0.257   7 0.0972 0.0158 15.9, 16.6 -0.06
P/J m 14.9 0.361   3 0.208 0.0242 14.5, 15.2 -1.3
PL/J f 16.5 0.586   7 0.221 0.0355 16.0, 17.7 0.31
PL/J m 17.0 1.69   10 0.534 0.0994 15.5, 20.4 1.29
PWD/PhJ f 17.4 0.62   8 0.219 0.0356 16.5, 18.1 1.42
PWD/PhJ m 15.8 0.535   8 0.189 0.0338 14.7, 16.4 -0.19
RIIIS/J f 16.7 0.207   8 0.0732 0.0124 16.3, 17.0 0.56
RIIIS/J m 15.5 0.418   7 0.158 0.0269 14.6, 15.8 -0.56
SJL/J f 15.8 0.231   7 0.0873 0.0146 15.4, 16.1 -0.55
SJL/J m 15.8 0.688   8 0.243 0.0435 15.2, 17.3 -0.19
SM/J f 16.5 0.539   8 0.191 0.0326 15.5, 17.1 0.31
SM/J m 16.2 0.411   8 0.145 0.0253 15.4, 16.8 0.3
SWR/J f 17.7 0.294   7 0.111 0.0166 17.4, 18.2 1.79
SWR/J m 17.3 0.196   8 0.0693 0.0113 16.9, 17.5 1.66
WSB/EiJ f 15.3 0.539   9 0.18 0.0351 14.6, 16.0 -1.17
WSB/EiJ m 15.3 0.32   8 0.113 0.021 15.0, 15.9 -0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.0875 0.1898 16.4606 15.7144
129S1/SvImJ m 15.7571 0.2029 16.156 15.3582
A/J f 16.2429 0.2029 16.6418 15.844
A/J m 15.65 0.2192 16.0809 15.2191
BALB/cByJ f 16.0571 0.2029 16.456 15.6582
BALB/cByJ m 15.9714 0.2029 16.3703 15.5725
BTBR T+ Itpr3tf/J f 17.35 0.1898 17.7231 16.9769
BTBR T+ Itpr3tf/J m 16.575 0.1898 16.9481 16.2019
BUB/BnJ f 16.8429 0.2029 17.2418 16.444
BUB/BnJ m 17.1667 0.2192 17.5975 16.7358
C3H/HeJ f 17.275 0.1898 17.6481 16.9019
C3H/HeJ m 17.1 0.1898 17.4731 16.7269
C57BL/10J f 14.6778 0.1789 15.0296 14.326
C57BL/10J m 15.3375 0.1898 15.7106 14.9644
C57BL/6J f 15.4571 0.2029 15.856 15.0582
C57BL/6J m 15.4833 0.2192 15.9142 15.0525
C57BLKS/J f 15.1625 0.1898 15.5356 14.7894
C57BLKS/J m 15.625 0.1898 15.9981 15.2519
C57BR/cdJ f 15.1875 0.1898 15.5606 14.8144
C57BR/cdJ m 15.3875 0.1898 15.7606 15.0144
C57L/J f 17.0875 0.1898 17.4606 16.7144
C57L/J m 16.8125 0.1898 17.1856 16.4394
CAST/EiJ f 15.375 0.1898 15.7481 15.0019
CAST/EiJ m 14.6667 0.2192 15.0975 14.2358
CBA/J f 16.5 0.1898 16.8731 16.1269
CBA/J m 16.3714 0.2029 16.7703 15.9725
DBA/2J f 14.5125 0.1898 14.8856 14.1394
DBA/2J m 14.4571 0.2029 14.856 14.0582
FVB/NJ f 16.4375 0.1898 16.8106 16.0644
FVB/NJ m 16.5 0.1898 16.8731 16.1269
KK/HlJ f 16.1143 0.2029 16.5132 15.7154
KK/HlJ m 15.7182 0.1619 16.0364 15.4
LP/J f 16.5625 0.1898 16.9356 16.1894
LP/J m 16.4429 0.2029 16.8418 16.044
MRL/MpJ f 16.5125 0.1898 16.8856 16.1394
MRL/MpJ m 16.45 0.1898 16.8231 16.0769
NOD.B10Sn-H2b/J f 17.0625 0.1898 17.4356 16.6894
NOD.B10Sn-H2b/J m 16.4375 0.1898 16.8106 16.0644
NON/ShiLtJ f 16.1333 0.1789 16.4851 15.7815
NON/ShiLtJ m 16.3429 0.2029 16.7418 15.944
NZO/HlLtJ f 15.6333 0.2192 16.0642 15.2025
NZO/HlLtJ m 14.05 0.2192 14.4809 13.6191
NZW/LacJ f 16.9875 0.1898 17.3606 16.6144
NZW/LacJ m 16.525 0.1898 16.8981 16.1519
P/J f 16.2429 0.2029 16.6418 15.844
P/J m 14.9 0.3099 15.5093 14.2907
PL/J f 16.5 0.2029 16.8989 16.1011
PL/J m 16.98 0.1698 17.3137 16.6463
PWD/PhJ f 17.4125 0.1898 17.7856 17.0394
PWD/PhJ m 15.8 0.1898 16.1731 15.4269
RIIIS/J f 16.65 0.1898 17.0231 16.2769
RIIIS/J m 15.5143 0.2029 15.9132 15.1154
SJL/J f 15.8 0.2029 16.1989 15.4011
SJL/J m 15.825 0.1898 16.1981 15.4519
SM/J f 16.525 0.1898 16.8981 16.1519
SM/J m 16.25 0.1898 16.6231 15.8769
SWR/J f 17.7 0.2029 18.0989 17.3011
SWR/J m 17.2875 0.1898 17.6606 16.9144
WSB/EiJ f 15.3333 0.1789 15.6851 14.9815
WSB/EiJ m 15.2625 0.1898 15.6356 14.8894


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.9223 0.1389 16.1954 15.6492
A/J both 15.9464 0.1493 16.24 15.6528
BALB/cByJ both 16.0143 0.1435 16.2963 15.7322
BTBR T+ Itpr3tf/J both 16.9625 0.1342 17.2263 16.6987
BUB/BnJ both 17.0048 0.1493 17.2983 16.7112
C3H/HeJ both 17.1875 0.1342 17.4513 16.9237
C57BL/10J both 15.0076 0.1304 15.2641 14.7512
C57BL/6J both 15.4702 0.1493 15.7638 15.1767
C57BLKS/J both 15.3938 0.1342 15.6576 15.1299
C57BR/cdJ both 15.2875 0.1342 15.5513 15.0237
C57L/J both 16.95 0.1342 17.2138 16.6862
CAST/EiJ both 15.0208 0.145 15.3058 14.7358
CBA/J both 16.4357 0.1389 16.7088 16.1626
DBA/2J both 14.4848 0.1389 14.7579 14.2117
FVB/NJ both 16.4688 0.1342 16.7326 16.2049
KK/HlJ both 15.9162 0.1298 16.1714 15.6611
LP/J both 16.5027 0.1389 16.7758 16.2296
MRL/MpJ both 16.4813 0.1342 16.7451 16.2174
NOD.B10Sn-H2b/J both 16.75 0.1342 17.0138 16.4862
NON/ShiLtJ both 16.2381 0.1353 16.504 15.9722
NZO/HlLtJ both 14.8417 0.155 15.1463 14.537
NZW/LacJ both 16.7563 0.1342 17.0201 16.4924
P/J both 15.5714 0.1852 15.9356 15.2073
PL/J both 16.74 0.1323 17.0 16.48
PWD/PhJ both 16.6063 0.1342 16.8701 16.3424
RIIIS/J both 16.0821 0.1389 16.3552 15.809
SJL/J both 15.8125 0.1389 16.0856 15.5394
SM/J both 16.3875 0.1342 16.6513 16.1237
SWR/J both 17.4938 0.1389 17.7669 17.2206
WSB/EiJ both 15.2979 0.1304 15.5543 15.0415




  GWAS USING LINEAR MIXED MODELS