Project measure / variable:   Peters4   CHr_M06

ID, description, units MPD:24385   CHr_M06   reticulocyte corpuscular hemoglobin (CHr)   [pg]  at age 6mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - reticulocyte corpuscular hemoglobin (CHr) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means16.4   pg 16.1   pg
Median of the strain means16.2   pg 16.1   pg
SD of the strain means± 0.803 ± 0.839
Coefficient of variation (CV)0.0490 0.0520
Min–max range of strain means14.8   –   17.8   pg 14.4   –   17.5   pg
Mean sample size per strain7.7   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.17 4.17 25.5263 < 0.0001
strain 29 263.2274 9.0768 55.5632 < 0.0001
sex:strain 29 21.1642 0.7298 4.4674 < 0.0001
Residuals 394 64.3638 0.1634


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.3 0.346   8 0.122 0.0213 15.7, 16.7 -0.11
129S1/SvImJ m 15.8 0.247   12 0.0712 0.0157 15.4, 16.2 -0.41
A/J f 16.0 0.404   5 0.181 0.0252 15.6, 16.5 -0.48
A/J m 15.7 0.255   8 0.0901 0.0163 15.3, 16.1 -0.52
BALB/cByJ f 16.3 0.232   6 0.0946 0.0142 16.0, 16.6 -0.11
BALB/cByJ m 16.5 0.338   8 0.12 0.0206 16.0, 16.9 0.43
BTBR T+ Itpr3tf/J f 17.3 0.333   8 0.118 0.0193 16.8, 17.7 1.14
BTBR T+ Itpr3tf/J m 16.7 0.189   8 0.0666 0.0113 16.4, 17.0 0.67
BUB/BnJ f 17.4 0.255   8 0.0901 0.0147 16.9, 17.7 1.26
BUB/BnJ m 17.2 0.288   7 0.109 0.0168 16.7, 17.6 1.26
C3H/HeJ f 17.8 0.342   8 0.121 0.0193 17.3, 18.2 1.76
C3H/HeJ m 17.5 0.559   8 0.198 0.0319 16.8, 18.4 1.62
C57BL/10J f 15.3 0.26   8 0.0921 0.017 15.0, 15.7 -1.35
C57BL/10J m 15.3 0.147   6 0.0601 0.00961 15.2, 15.6 -1.0
C57BL/6J f 15.8 0.894   8 0.316 0.0565 14.5, 17.6 -0.73
C57BL/6J m 16.1 0.358   7 0.135 0.0222 15.4, 16.5 -0.05
C57BLKS/J f 15.5 0.368   8 0.13 0.0238 15.1, 16.0 -1.1
C57BLKS/J m 15.7 0.41   7 0.155 0.0261 15.0, 16.1 -0.52
C57BR/cdJ f 16.1 0.479   7 0.181 0.0297 15.4, 16.8 -0.36
C57BR/cdJ m 15.9 0.325   8 0.115 0.0204 15.4, 16.4 -0.29
C57L/J f 17.3 0.217   8 0.0766 0.0125 16.9, 17.5 1.14
C57L/J m 16.8 0.16   8 0.0565 0.00949 16.6, 17.1 0.79
CAST/EiJ f 14.8 0.563   10 0.178 0.0381 13.7, 15.3 -1.98
CAST/EiJ m 14.4 0.0707   2   0.05 0.00493 14.3, 14.4 -2.07
CBA/J f 17.1 0.207   6 0.0843 0.0121 16.9, 17.4 0.89
CBA/J m 16.8 0.169   8 0.0596 0.0101 16.4, 16.9 0.79
DBA/2J f 15.4 0.221   7 0.0837 0.0144 15.2, 15.8 -1.23
DBA/2J m 14.8 0.427   6 0.174 0.0289 14.3, 15.5 -1.6
FVB/NJ f 16.1 0.212   8 0.075 0.0132 15.7, 16.4 -0.36
FVB/NJ m 16.1 0.138   7 0.0522 0.00856 15.9, 16.3 -0.05
KK/HlJ f 15.8 0.122   6 0.05 0.00778 15.6, 15.9 -0.73
KK/HlJ m 14.8 0.893   8 0.316 0.0601 13.1, 15.6 -1.6
LP/J f 16.6 0.164   6 0.0671 0.00993 16.3, 16.7 0.27
LP/J m 16.9 0.735   8 0.26 0.0434 16.3, 18.5 0.91
MRL/MpJ f 17.1 0.336   8 0.119 0.0196 16.7, 17.6 0.89
MRL/MpJ m 17.1 0.308   5 0.138 0.018 16.8, 17.5 1.14
NOD.B10Sn-H2b/J f 17.0 0.173   8 0.0611 0.0102 16.7, 17.2 0.76
NOD.B10Sn-H2b/J m 16.3 0.175   8 0.062 0.0107 16.1, 16.6 0.19
NON/ShiLtJ f 16.1 0.354   8 0.125 0.022 15.6, 16.7 -0.36
NON/ShiLtJ m 16.4 0.216   6 0.0882 0.0131 16.2, 16.7 0.31
NZO/HlLtJ f 15.1 0.256   8 0.0905 0.0169 14.6, 15.4 -1.6
NZO/HlLtJ m 15.3 0.353   7 0.134 0.0231 14.8, 15.7 -1.0
NZW/LacJ f 17.1 0.219   8 0.0773 0.0128 16.9, 17.6 0.89
NZW/LacJ m 17.2 0.361   6 0.148 0.021 16.6, 17.6 1.26
P/J f 16.0 0.311   8 0.11 0.0194 15.7, 16.6 -0.48
P/J m 16.0 1.24   8 0.438 0.0773 15.0, 19.0 -0.17
PL/J f 16.0 0.619   13 0.172 0.0386 15.6, 17.9 -0.48
PL/J m 16.2 0.158   8 0.0559 0.00975 16.0, 16.5 0.07
PWD/PhJ f 17.5 0.26   8 0.0921 0.0149 17.2, 18.0 1.39
PWD/PhJ m 16.9 0.215   7 0.0812 0.0127 16.5, 17.2 0.91
RIIIS/J f 17.1 0.16   8 0.0565 0.00932 16.9, 17.4 0.89
RIIIS/J m 15.8 0.119   8 0.042 0.00754 15.6, 16.0 -0.41
SJL/J f 16.1 0.352   8 0.125 0.0219 15.6, 16.5 -0.36
SJL/J m 15.1 0.858   8 0.303 0.0569 14.2, 17.0 -1.24
SM/J f 16.4 0.121   6 0.0494 0.0074 16.2, 16.5 0.02
SM/J m 16.5 0.212   8 0.075 0.0129 16.2, 16.9 0.43
SWR/J f 17.5 0.227   8 0.0802 0.0129 17.2, 17.8 1.39
SWR/J m 17.4 0.213   8 0.0754 0.0122 17.1, 17.7 1.5
WSB/EiJ f 15.7 0.164   10 0.0517 0.0104 15.5, 16.0 -0.86
WSB/EiJ m 15.0 0.199   7 0.0751 0.0132 14.8, 15.4 -1.36


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.2625 0.1429 16.5434 15.9816
129S1/SvImJ m 15.7583 0.1167 15.9877 15.5289
A/J f 16.04 0.1808 16.3954 15.6846
A/J m 15.675 0.1429 15.9559 15.3941
BALB/cByJ f 16.3167 0.165 16.6411 15.9923
BALB/cByJ m 16.45 0.1429 16.7309 16.1691
BTBR T+ Itpr3tf/J f 17.275 0.1429 17.5559 16.9941
BTBR T+ Itpr3tf/J m 16.7125 0.1429 16.9934 16.4316
BUB/BnJ f 17.375 0.1429 17.6559 17.0941
BUB/BnJ m 17.1571 0.1528 17.4575 16.8568
C3H/HeJ f 17.75 0.1429 18.0309 17.4691
C3H/HeJ m 17.5125 0.1429 17.7934 17.2316
C57BL/10J f 15.325 0.1429 15.6059 15.0441
C57BL/10J m 15.3167 0.165 15.6411 14.9923
C57BL/6J f 15.8125 0.1429 16.0934 15.5316
C57BL/6J m 16.1143 0.1528 16.4146 15.8139
C57BLKS/J f 15.4875 0.1429 15.7684 15.2066
C57BLKS/J m 15.7143 0.1528 16.0146 15.4139
C57BR/cdJ f 16.1286 0.1528 16.4289 15.8282
C57BR/cdJ m 15.9 0.1429 16.1809 15.6191
C57L/J f 17.3125 0.1429 17.5934 17.0316
C57L/J m 16.8375 0.1429 17.1184 16.5566
CAST/EiJ f 14.78 0.1278 15.0313 14.5287
CAST/EiJ m 14.35 0.2858 14.9119 13.7881
CBA/J f 17.1333 0.165 17.4577 16.8089
CBA/J m 16.7625 0.1429 17.0434 16.4816
DBA/2J f 15.4286 0.1528 15.7289 15.1282
DBA/2J m 14.7667 0.165 15.0911 14.4423
FVB/NJ f 16.075 0.1429 16.3559 15.7941
FVB/NJ m 16.1286 0.1528 16.4289 15.8282
KK/HlJ f 15.75 0.165 16.0744 15.4256
KK/HlJ m 14.85 0.1429 15.1309 14.5691
LP/J f 16.55 0.165 16.8744 16.2256
LP/J m 16.95 0.1429 17.2309 16.6691
MRL/MpJ f 17.1125 0.1429 17.3934 16.8316
MRL/MpJ m 17.1 0.1808 17.4554 16.7446
NOD.B10Sn-H2b/J f 16.9875 0.1429 17.2684 16.7066
NOD.B10Sn-H2b/J m 16.325 0.1429 16.6059 16.0441
NON/ShiLtJ f 16.075 0.1429 16.3559 15.7941
NON/ShiLtJ m 16.4333 0.165 16.7577 16.1089
NZO/HlLtJ f 15.1375 0.1429 15.4184 14.8566
NZO/HlLtJ m 15.2857 0.1528 15.5861 14.9854
NZW/LacJ f 17.125 0.1429 17.4059 16.8441
NZW/LacJ m 17.2333 0.165 17.5577 16.9089
P/J f 16.0375 0.1429 16.3184 15.7566
P/J m 16.025 0.1429 16.3059 15.7441
PL/J f 16.0462 0.1121 16.2665 15.8258
PL/J m 16.225 0.1429 16.5059 15.9441
PWD/PhJ f 17.525 0.1429 17.8059 17.2441
PWD/PhJ m 16.8571 0.1528 17.1575 16.5568
RIIIS/J f 17.1375 0.1429 17.4184 16.8566
RIIIS/J m 15.7625 0.1429 16.0434 15.4816
SJL/J f 16.0875 0.1429 16.3684 15.8066
SJL/J m 15.075 0.1429 15.3559 14.7941
SM/J f 16.3667 0.165 16.6911 16.0423
SM/J m 16.475 0.1429 16.7559 16.1941
SWR/J f 17.55 0.1429 17.8309 17.2691
SWR/J m 17.4375 0.1429 17.7184 17.1566
WSB/EiJ f 15.73 0.1278 15.9813 15.4787
WSB/EiJ m 15.0429 0.1528 15.3432 14.7425


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 16.0104 0.0922 16.1918 15.8291
A/J both 15.8575 0.1152 16.084 15.631
BALB/cByJ both 16.3833 0.1091 16.5979 16.1688
BTBR T+ Itpr3tf/J both 16.9937 0.101 17.1924 16.7951
BUB/BnJ both 17.2661 0.1046 17.4717 17.0604
C3H/HeJ both 17.6312 0.101 17.8299 17.4326
C57BL/10J both 15.3208 0.1091 15.5354 15.1063
C57BL/6J both 15.9634 0.1046 16.169 15.7578
C57BLKS/J both 15.6009 0.1046 15.8065 15.3953
C57BR/cdJ both 16.0143 0.1046 16.2199 15.8087
C57L/J both 17.075 0.101 17.2737 16.8763
CAST/EiJ both 14.565 0.1565 14.8728 14.2572
CBA/J both 16.9479 0.1091 17.1625 16.7333
DBA/2J both 15.0976 0.1124 15.3187 14.8766
FVB/NJ both 16.1018 0.1046 16.3074 15.8962
KK/HlJ both 15.3 0.1091 15.5146 15.0854
LP/J both 16.75 0.1091 16.9646 16.5354
MRL/MpJ both 17.1062 0.1152 17.3328 16.8797
NOD.B10Sn-H2b/J both 16.6562 0.101 16.8549 16.4576
NON/ShiLtJ both 16.2542 0.1091 16.4687 16.0396
NZO/HlLtJ both 15.2116 0.1046 15.4172 15.006
NZW/LacJ both 17.1792 0.1091 17.3937 16.9646
P/J both 16.0312 0.101 16.2299 15.8326
PL/J both 16.1356 0.0908 16.3141 15.957
PWD/PhJ both 17.1911 0.1046 17.3967 16.9854
RIIIS/J both 16.45 0.101 16.6487 16.2513
SJL/J both 15.5812 0.101 15.7799 15.3826
SM/J both 16.4208 0.1091 16.6354 16.2063
SWR/J both 17.4937 0.101 17.6924 17.2951
WSB/EiJ both 15.3864 0.0996 15.5822 15.1906




  GWAS USING LINEAR MIXED MODELS