Project measure / variable:   Peters4   Retic_M06

ID, description, units MPD:24377   Retic_M06   reticulocyte count (Retic)   [n/L]  at age 6mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - reticulocyte count (Retic) at age 6mo

SWR/JNOD.B10Sn-H2<b>/JC57BL/6JC57BR/cdJMRL/MpJSJL/JNZW/LacJC57L/JDBA/2JKK/HlJC3H/HeJC57BLKS/JNON/ShiLtJPL/JFVB/NJC57BL/10JPWD/PhJBUB/BnJLP/JBALB/cByJWSB/EiJSM/JCAST/EiJNZO/HlLtJA/J129S1/SvImJBTBR T<+> Itpr3<tf>/JP/JRIIIS/JCBA/J n/L x 109 100200300400500600700800900femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means326   n/L 328   n/L
Median of the strain means318   n/L 332   n/L
SD of the strain means± 65.7 ± 52.1
Coefficient of variation (CV)0.201 0.159
Min–max range of strain means229   –   507   n/L 221   –   435   n/L
Mean sample size per strain7.6   mice 7.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1397.9751 1397.9751 0.2146 0.6435
strain 29 1157408.4752 39910.6371 6.1257 < 0.0001
sex:strain 29 349154.2451 12039.8016 1.8479 0.0056
Residuals 382 2488826.2096 6515.2519


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 60 (60)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 258.0 39.8   8 14.1 0.154 198.0, 314.0 -1.04
129S1/SvImJ m 271.0 26.1   11 7.86 0.096 228.0, 315.0 -1.09
A/J f 256.0 44.3   5 19.8 0.173 210.0, 322.0 -1.07
A/J m 298.0 22.1   8 7.8 0.0739 273.0, 335.0 -0.57
BALB/cByJ f 278.0 25.8   6 10.5 0.0929 232.0, 309.0 -0.74
BALB/cByJ m 328.0 41.9   8 14.8 0.128 271.0, 390.0 0.0
BTBR T+ Itpr3tf/J f 255.0 63.9   8 22.6 0.25 121.0, 354.0 -1.09
BTBR T+ Itpr3tf/J m 270.0 28.8   8 10.2 0.106 213.0, 297.0 -1.11
BUB/BnJ f 310.0 49.0   8 17.3 0.158 222.0, 376.0 -0.25
BUB/BnJ m 338.0 50.5   7 19.1 0.149 281.0, 412.0 0.2
C3H/HeJ f 358.0 61.0   8 21.6 0.17 237.0, 447.0 0.48
C3H/HeJ m 333.0 51.6   8 18.3 0.155 292.0, 440.0 0.1
C57BL/10J f 316.0 46.6   8 16.5 0.147 238.0, 370.0 -0.16
C57BL/10J m 336.0 28.5   5 12.7 0.0846 298.0, 368.0 0.16
C57BL/6J f 420.0 72.9   8 25.8 0.173 348.0, 578.0 1.43
C57BL/6J m 372.0 85.4   7 32.3 0.229 261.0, 545.0 0.85
C57BLKS/J f 337.0 106.0   8 37.5 0.315 177.0, 513.0 0.16
C57BLKS/J m 342.0 25.9   7 9.8 0.0758 297.0, 376.0 0.27
C57BR/cdJ f 376.0 79.6   7 30.1 0.212 232.0, 474.0 0.76
C57BR/cdJ m 404.0 42.9   8 15.2 0.106 337.0, 465.0 1.46
C57L/J f 364.0 41.5   7 15.7 0.114 310.0, 434.0 0.57
C57L/J m 355.0 22.2   8 7.84 0.0625 310.0, 381.0 0.52
CAST/EiJ f 330.0 159.0   9 53.0 0.481 213.0, 739.0 0.06
CAST/EiJ m 262.0 9.19   2   6.5 0.035 256.0, 269.0 -1.26
CBA/J f 260.0 71.6   6 29.2 0.275 188.0, 390.0 -1.01
CBA/J m 221.0 19.4   8 6.85 0.0877 192.0, 249.0 -2.05
DBA/2J f 275.0 89.8   7 34.0 0.327 165.0, 384.0 -0.78
DBA/2J m 435.0 246.0   5 110.0 0.565 255.0, 840.0 2.06
FVB/NJ f 341.0 92.8   8 32.8 0.273 221.0, 481.0 0.22
FVB/NJ m 315.0 51.9   5 23.2 0.165 248.0, 385.0 -0.25
KK/HlJ f 379.0 53.4   6 21.8 0.141 319.0, 465.0 0.8
KK/HlJ m 316.0 71.3   8 25.2 0.226 267.0, 482.0 -0.23
LP/J f 271.0 68.7   6 28.0 0.254 173.0, 358.0 -0.84
LP/J m 352.0 27.4   7 10.4 0.0779 312.0, 386.0 0.46
MRL/MpJ f 360.0 102.0   8 35.9 0.282 223.0, 583.0 0.51
MRL/MpJ m 404.0 22.2   5 9.93 0.0549 385.0, 440.0 1.46
NOD.B10Sn-H2b/J f 448.0 96.6   8 34.2 0.215 303.0, 631.0 1.85
NOD.B10Sn-H2b/J m 414.0 38.9   8 13.8 0.094 349.0, 474.0 1.66
NON/ShiLtJ f 316.0 79.2   8 28.0 0.251 179.0, 418.0 -0.16
NON/ShiLtJ m 354.0 36.3   6 14.8 0.103 286.0, 392.0 0.5
NZO/HlLtJ f 264.0 32.5   8 11.5 0.123 214.0, 320.0 -0.95
NZO/HlLtJ m 294.0 84.8   6 34.6 0.288 190.0, 399.0 -0.65
NZW/LacJ f 393.0 70.4   8 24.9 0.179 314.0, 482.0 1.01
NZW/LacJ m 334.0 43.4   5 19.4 0.13 285.0, 377.0 0.12
P/J f 229.0 62.2   8 22.0 0.271 128.0, 329.0 -1.48
P/J m 274.0 34.1   7 12.9 0.124 234.0, 337.0 -1.03
PL/J f 381.0 112.0   13 31.2 0.295 160.0, 584.0 0.83
PL/J m 281.0 17.9   8 6.32 0.0637 261.0, 318.0 -0.9
PWD/PhJ f 321.0 52.9   8 18.7 0.165 241.0, 389.0 -0.08
PWD/PhJ m 328.0 28.6   7 10.8 0.0872 284.0, 366.0 0.0
RIIIS/J f 255.0 48.2   8 17.0 0.189 207.0, 355.0 -1.09
RIIIS/J m 231.0 25.8   8 9.14 0.112 204.0, 272.0 -1.86
SJL/J f 368.0 122.0   8 43.3 0.333 191.0, 548.0 0.63
SJL/J m 379.0 257.0   7 97.0 0.678 199.0, 923.0 0.98
SM/J f 265.0 55.5   6 22.7 0.21 220.0, 370.0 -0.93
SM/J m 331.0 132.0   8 46.6 0.398 227.0, 647.0 0.06
SWR/J f 507.0 165.0   8 58.2 0.324 122.0, 641.0 2.75
SWR/J m 362.0 25.3   8 8.95 0.07 326.0, 403.0 0.66
WSB/EiJ f 300.0 45.8   10 14.5 0.153 212.0, 379.0 -0.4
WSB/EiJ m 300.0 87.3   7 33.0 0.291 192.0, 392.0 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 258.375 28.5378 314.4859 202.2641
129S1/SvImJ m 271.4545 24.3371 319.306 223.603
A/J f 256.4 36.0978 327.3752 185.4248
A/J m 298.5 28.5378 354.6109 242.3891
BALB/cByJ f 277.6667 32.9526 342.4579 212.8754
BALB/cByJ m 328.0 28.5378 384.1109 271.8891
BTBR T+ Itpr3tf/J f 255.375 28.5378 311.4859 199.2641
BTBR T+ Itpr3tf/J m 270.5 28.5378 326.6109 214.3891
BUB/BnJ f 309.75 28.5378 365.8609 253.6391
BUB/BnJ m 337.8571 30.5082 397.8422 277.8721
C3H/HeJ f 358.125 28.5378 414.2359 302.0141
C3H/HeJ m 333.25 28.5378 389.3609 277.1391
C57BL/10J f 315.875 28.5378 371.9859 259.7641
C57BL/10J m 336.2 36.0978 407.1752 265.2248
C57BL/6J f 420.0 28.5378 476.1109 363.8891
C57BL/6J m 372.2857 30.5082 432.2707 312.3007
C57BLKS/J f 337.25 28.5378 393.3609 281.1391
C57BLKS/J m 342.0 30.5082 401.985 282.015
C57BR/cdJ f 376.4286 30.5082 436.4136 316.4435
C57BR/cdJ m 404.25 28.5378 460.3609 348.1391
C57L/J f 364.4286 30.5082 424.4136 304.4435
C57L/J m 355.0 28.5378 411.1109 298.8891
CAST/EiJ f 330.2222 26.9057 383.124 277.3204
CAST/EiJ m 262.5 57.0756 374.7217 150.2783
CBA/J f 260.1667 32.9526 324.9579 195.3754
CBA/J m 220.875 28.5378 276.9859 164.7641
DBA/2J f 274.5714 30.5082 334.5565 214.5864
DBA/2J m 435.2 36.0978 506.1752 364.2248
FVB/NJ f 340.625 28.5378 396.7359 284.5141
FVB/NJ m 315.4 36.0978 386.3752 244.4248
KK/HlJ f 379.0 32.9526 443.7912 314.2088
KK/HlJ m 315.875 28.5378 371.9859 259.7641
LP/J f 270.6667 32.9526 335.4579 205.8754
LP/J m 352.1429 30.5082 412.1279 292.1578
MRL/MpJ f 360.0 28.5378 416.1109 303.8891
MRL/MpJ m 404.2 36.0978 475.1752 333.2248
NOD.B10Sn-H2b/J f 448.5 28.5378 504.6109 392.3891
NOD.B10Sn-H2b/J m 414.0 28.5378 470.1109 357.8891
NON/ShiLtJ f 315.625 28.5378 371.7359 259.5141
NON/ShiLtJ m 353.5 32.9526 418.2912 288.7088
NZO/HlLtJ f 263.875 28.5378 319.9859 207.7641
NZO/HlLtJ m 294.0 32.9526 358.7912 229.2088
NZW/LacJ f 393.125 28.5378 449.2359 337.0141
NZW/LacJ m 333.8 36.0978 404.7752 262.8248
P/J f 229.25 28.5378 285.3609 173.1391
P/J m 274.4286 30.5082 334.4136 214.4435
PL/J f 380.7692 22.3869 424.7862 336.7523
PL/J m 280.625 28.5378 336.7359 224.5141
PWD/PhJ f 321.0 28.5378 377.1109 264.8891
PWD/PhJ m 328.2857 30.5082 388.2707 268.3007
RIIIS/J f 255.0 28.5378 311.1109 198.8891
RIIIS/J m 230.875 28.5378 286.9859 174.7641
SJL/J f 367.5 28.5378 423.6109 311.3891
SJL/J m 378.8571 30.5082 438.8422 318.8721
SM/J f 264.8333 32.9526 329.6246 200.0421
SM/J m 331.25 28.5378 387.3609 275.1391
SWR/J f 507.0 28.5378 563.1109 450.8891
SWR/J m 361.5 28.5378 417.6109 305.3891
WSB/EiJ f 300.1 25.525 350.2871 249.9129
WSB/EiJ m 300.0 30.5082 359.985 240.015


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 264.9148 18.753 301.7868 228.0427
A/J both 277.45 23.0079 322.688 232.212
BALB/cByJ both 302.8333 21.7961 345.6887 259.978
BTBR T+ Itpr3tf/J both 262.9375 20.1793 302.6139 223.2611
BUB/BnJ both 323.8036 20.8875 364.8725 282.7346
C3H/HeJ both 345.6875 20.1793 385.3639 306.0111
C57BL/10J both 326.0375 23.0079 371.2755 280.7995
C57BL/6J both 396.1429 20.8875 437.2118 355.0739
C57BLKS/J both 339.625 20.8875 380.6939 298.5561
C57BR/cdJ both 390.3393 20.8875 431.4082 349.2703
C57L/J both 359.7143 20.8875 400.7832 318.6453
CAST/EiJ both 296.3611 31.5497 358.394 234.3282
CBA/J both 240.5208 21.7961 283.3762 197.6655
DBA/2J both 354.8857 23.6316 401.3499 308.4215
FVB/NJ both 328.0125 23.0079 373.2505 282.7745
KK/HlJ both 347.4375 21.7961 390.2929 304.5821
LP/J both 311.4048 22.4534 355.5525 267.257
MRL/MpJ both 382.1 23.0079 427.338 336.862
NOD.B10Sn-H2b/J both 431.25 20.1793 470.9264 391.5736
NON/ShiLtJ both 334.5625 21.7961 377.4179 291.7071
NZO/HlLtJ both 278.9375 21.7961 321.7929 236.0821
NZW/LacJ both 363.4625 23.0079 408.7005 318.2245
P/J both 251.8393 20.8875 292.9082 210.7703
PL/J both 330.6971 18.1355 366.3549 295.0393
PWD/PhJ both 324.6429 20.8875 365.7118 283.5739
RIIIS/J both 242.9375 20.1793 282.6139 203.2611
SJL/J both 373.1786 20.8875 414.2475 332.1096
SM/J both 298.0417 21.7961 340.897 255.1863
SWR/J both 434.25 20.1793 473.9264 394.5736
WSB/EiJ both 300.05 19.8889 339.1555 260.9445




  GWAS USING LINEAR MIXED MODELS

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