Phenotype measure:   Peters4   MCH_M24

ID, description, units MPD:24368   MCH_M24   mean RBC corpuscular hemoglobin content (MCH)   [pg]  at age 24mo
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - mean RBC corpuscular hemoglobin content (MCH) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means14.5   pg 14.1   pg
Median of the strain means14.7   pg 14.1   pg
SD of the strain means± 0.742 ± 0.520
Coefficient of variation (CV)0.0511 0.0370
Min–max range of strain means12.9   –   15.3   pg 12.6   –   14.7   pg
Mean sample size per strain6.7   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.0612 8.0612 16.0799 0.0001
strain 9 25.4522 2.828 5.6411 < 0.0001
sex:strain 9 25.0129 2.7792 5.5438 < 0.0001
Residuals 119 59.6572 0.5013


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.7 0.645   8 0.228 0.0438 13.4, 15.6 0.23
129S1/SvImJ m 13.9 0.483   12 0.139 0.0347 13.1, 14.9 -0.3
A/J m 13.9 0.0707   2   0.05 0.00507 13.9, 14.0 -0.3
BALB/cByJ f 15.0 0.866   6 0.354 0.0579 13.9, 15.9 0.64
C57BL/10J f 12.9 0.877   7 0.332 0.068 11.4, 14.0 -2.19
C57BL/10J m 14.0 0.481   8 0.17 0.0345 13.4, 14.7 -0.11
C57BL/6J f 14.7 0.321   6 0.131 0.0219 14.2, 15.1 0.23
C57BL/6J m 14.3 0.325   7 0.123 0.0227 13.8, 14.7 0.47
C57BLKS/J f 13.5 0.354   6 0.145 0.0262 13.2, 14.0 -1.38
C57BLKS/J m 14.1 0.35   7 0.132 0.0248 13.6, 14.6 0.08
C57BR/cdJ f 14.7 0.526   7 0.199 0.0356 14.0, 15.5 0.23
C57BR/cdJ m 12.6 1.63   6 0.666 0.129 10.4, 14.7 -2.81
LP/J f 15.3 0.395   7 0.149 0.0257 14.7, 16.0 1.04
LP/J m 14.1 0.726   5 0.325 0.0516 13.0, 15.0 0.08
NON/ShiLtJ f 14.4 0.752   7 0.284 0.0521 13.5, 15.6 -0.17
NON/ShiLtJ m 14.4 0.465   6 0.19 0.0323 13.7, 14.9 0.66
NZW/LacJ f 15.3 1.54   7 0.584 0.101 12.8, 16.8 1.04
NZW/LacJ m 14.5 0.803   7 0.303 0.0554 13.2, 15.2 0.85
PWD/PhJ f 15.0 0.447   6 0.183 0.0298 14.3, 15.6 0.64
PWD/PhJ m 14.1 0.485   6 0.198 0.0343 13.6, 14.9 0.08
SM/J m 14.7 0.828   7 0.313 0.0562 13.3, 15.8 1.24
WSB/EiJ f 14.3 0.19   7 0.0719 0.0133 14.0, 14.6 -0.31
WSB/EiJ m 14.1 0.631   7 0.238 0.0448 13.4, 15.4 0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.725 0.2503 15.2207 14.2293
129S1/SvImJ m 13.925 0.2044 14.3297 13.5203
C57BL/10J f 12.9 0.2676 13.4299 12.3701
C57BL/10J m 13.95 0.2503 14.4457 13.4543
C57BL/6J f 14.65 0.2891 15.2224 14.0776
C57BL/6J m 14.3286 0.2676 14.8585 13.7987
C57BLKS/J f 13.5167 0.2891 14.089 12.9443
C57BLKS/J m 14.1286 0.2676 14.6585 13.5987
C57BR/cdJ f 14.7429 0.2676 15.2728 14.213
C57BR/cdJ m 12.6333 0.2891 13.2057 12.061
LP/J f 15.3286 0.2676 15.8585 14.7987
LP/J m 14.08 0.3166 14.707 13.453
NON/ShiLtJ f 14.4429 0.2676 14.9728 13.913
NON/ShiLtJ m 14.4 0.2891 14.9724 13.8276
NZW/LacJ f 15.2857 0.2676 15.8156 14.7558
NZW/LacJ m 14.4857 0.2676 15.0156 13.9558
PWD/PhJ f 15.0 0.2891 15.5724 14.4276
PWD/PhJ m 14.15 0.2891 14.7224 13.5776
WSB/EiJ f 14.3429 0.2676 14.8728 13.813
WSB/EiJ m 14.0857 0.2676 14.6156 13.5558


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.325 0.1616 14.645 14.005
C57BL/10J both 13.425 0.1832 13.7878 13.0622
C57BL/6J both 14.4893 0.197 14.8793 14.0993
C57BLKS/J both 13.8226 0.197 14.2126 13.4326
C57BR/cdJ both 13.6881 0.197 14.0781 13.2981
LP/J both 14.7043 0.2073 15.1147 14.2938
NON/ShiLtJ both 14.4214 0.197 14.8114 14.0314
NZW/LacJ both 14.8857 0.1892 15.2604 14.511
PWD/PhJ both 14.575 0.2044 14.9797 14.1703
WSB/EiJ both 14.2143 0.1892 14.589 13.8396




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.