Phenotype measure:   Peters4   MCH_M18

ID, description, units MPD:24367   MCH_M18   mean RBC corpuscular hemoglobin content (MCH)   [pg]  at age 18mo
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
Ontology mappings

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Peters4 - mean RBC corpuscular hemoglobin content (MCH) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means15.3   pg 14.9   pg
Median of the strain means15.2   pg 14.9   pg
SD of the strain means± 0.853 ± 0.718
Coefficient of variation (CV)0.0556 0.0481
Min–max range of strain means13.4   –   16.8   pg 13.1   –   16.6   pg
Mean sample size per strain6.9   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 24.3069 24.3069 59.967 < 0.0001
strain 26 174.2413 6.7016 16.5334 < 0.0001
sex:strain 26 33.9624 1.3062 3.2226 < 0.0001
Residuals 331 134.1665 0.4053


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15.6 0.552   8 0.195 0.0355 14.3, 16.1 0.31
129S1/SvImJ m 14.7 0.282   7 0.107 0.0191 14.5, 15.1 -0.31
A/J f 14.6 0.479   7 0.181 0.0328 13.5, 14.8 -0.86
A/J m 14.5 0.505   14 0.135 0.0349 13.1, 15.3 -0.59
BALB/cByJ f 15.2 0.271   8 0.0959 0.0179 15.0, 15.7 -0.16
BALB/cByJ m 14.2 0.714   7 0.27 0.0501 13.4, 15.0 -1.01
BTBR T+ Itpr3tf/J f 16.1 0.763   8 0.27 0.0474 15.2, 17.5 0.9
BTBR T+ Itpr3tf/J m 14.9 0.295   5 0.132 0.0198 14.4, 15.1 -0.03
BUB/BnJ f 15.5 0.259   5 0.116 0.0167 15.1, 15.8 0.19
BUB/BnJ m 15.7 0.344   6 0.141 0.0219 15.1, 16.0 1.08
C3H/HeJ f 15.9 0.339   7 0.128 0.0213 15.3, 16.3 0.66
C3H/HeJ m 15.9 0.839   8 0.297 0.0528 14.0, 16.6 1.36
C57BL/10J f 14.0 0.591   6 0.241 0.0423 13.1, 14.7 -1.57
C57BL/10J m 14.4 0.53   13 0.147 0.0369 13.0, 15.0 -0.73
C57BL/6J f 15.2 0.5   7 0.189 0.033 14.5, 16.1 -0.16
C57BL/6J m 15.3 0.173   7 0.0655 0.0113 15.1, 15.5 0.52
C57BLKS/J m 14.7 0.229   16 0.0574 0.0156 14.2, 15.0 -0.31
C57BR/cdJ f 15.6 0.723   7 0.273 0.0462 15.1, 17.2 0.31
C57BR/cdJ m 13.8 1.9   8 0.673 0.138 10.6, 15.0 -1.57
C57L/J f 16.4 0.315   7 0.119 0.0192 15.9, 16.8 1.25
C57L/J m 15.6 0.363   7 0.137 0.0233 15.1, 16.2 0.94
CAST/EiJ f 13.6 0.655   8 0.231 0.0481 12.5, 14.6 -2.03
CBA/J f 15.8 0.354   2   0.25 0.0224 15.5, 16.0 0.54
CBA/J m 15.0 0.195   5 0.0872 0.013 14.7, 15.1 0.11
DBA/2J f 13.4 0.248   6 0.101 0.0186 13.1, 13.7 -2.27
DBA/2J m 13.1 0.321   6 0.131 0.0244 12.7, 13.7 -2.54
FVB/NJ f 15.2 0.341   7 0.129 0.0224 14.8, 15.8 -0.16
FVB/NJ m 15.2 0.311   12 0.0897 0.0205 14.7, 15.7 0.38
KK/HlJ f 15.5 0.697   6 0.285 0.045 14.1, 16.0 0.19
KK/HlJ m 14.0 0.657   7 0.248 0.047 12.6, 14.7 -1.29
LP/J m 15.7 0.164   8 0.0581 0.0105 15.5, 16.0 1.08
MRL/MpJ f 15.1 0.791   7 0.299 0.0526 13.8, 15.9 -0.28
MRL/MpJ m 15.0 0.463   8 0.164 0.0309 14.4, 15.6 0.11
NOD.B10Sn-H2b/J f 16.8 0.294   7 0.111 0.0175 16.3, 17.1 1.72
NOD.B10Sn-H2b/J m 15.9 0.19   7 0.0719 0.0119 15.6, 16.2 1.36
NON/ShiLtJ f 14.9 0.43   5 0.192 0.0289 14.3, 15.3 -0.51
NON/ShiLtJ m 14.9 1.19   7 0.451 0.08 12.5, 16.0 -0.03
NZO/HlLtJ f 14.9 0.322   10 0.102 0.0216 14.4, 15.5 -0.51
NZO/HlLtJ m 14.7 0.212   2   0.15 0.0145 14.5, 14.8 -0.31
NZW/LacJ f 16.7 0.501   7 0.19 0.0301 15.8, 17.4 1.6
NZW/LacJ m 15.6 0.232   6 0.0946 0.0149 15.3, 15.9 0.94
P/J f 14.7 0.503   7 0.19 0.0341 13.9, 15.5 -0.74
P/J m 14.8 1.73   5 0.772 0.117 12.7, 17.0 -0.17
PL/J f 14.9 1.45   8 0.514 0.0975 13.6, 18.2 -0.51
PL/J m 14.5 0.481   8 0.17 0.0331 13.9, 15.3 -0.59
PWD/PhJ f 15.9 0.299   6 0.122 0.0188 15.4, 16.2 0.66
PWD/PhJ m 14.3 0.673   7 0.254 0.0469 13.4, 15.0 -0.87
RIIIS/J f 14.9 0.441   8 0.156 0.0295 14.4, 15.8 -0.51
RIIIS/J m 14.9 0.2   8 0.0707 0.0134 14.6, 15.2 -0.03
SJL/J f 14.9 0.788   7 0.298 0.053 13.8, 16.0 -0.51
SJL/J m 15.1 0.48   4 0.24 0.0319 14.5, 15.5 0.24
SM/J f 16.2 0.524   6 0.214 0.0323 15.6, 17.2 1.01
SM/J m 15.2 0.567   10 0.179 0.0372 13.8, 15.8 0.38
SWR/J f 16.6 0.489   7 0.185 0.0294 15.9, 17.5 1.48
SWR/J m 16.6 0.192   8 0.068 0.0116 16.3, 16.9 2.33
WSB/EiJ f 15.3 0.592   8 0.209 0.0386 14.7, 16.7 -0.04
WSB/EiJ m 14.6 0.532   9 0.177 0.0364 13.8, 15.2 -0.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15.575 0.2251 16.0178 15.1322
129S1/SvImJ m 14.7429 0.2406 15.2162 14.2695
A/J f 14.5714 0.2406 15.0448 14.0981
A/J m 14.4857 0.1702 14.8204 14.151
BALB/cByJ f 15.175 0.2251 15.6178 14.7322
BALB/cByJ m 14.2429 0.2406 14.7162 13.7695
BTBR T+ Itpr3tf/J f 16.1 0.2251 16.5428 15.6572
BTBR T+ Itpr3tf/J m 14.88 0.2847 15.4401 14.3199
BUB/BnJ f 15.52 0.2847 16.0801 14.9599
BUB/BnJ m 15.7333 0.2599 16.2446 15.222
C3H/HeJ f 15.8857 0.2406 16.3591 15.4123
C3H/HeJ m 15.8875 0.2251 16.3303 15.4447
C57BL/10J f 13.9833 0.2599 14.4946 13.472
C57BL/10J m 14.3846 0.1766 14.732 14.0373
C57BL/6J f 15.1571 0.2406 15.6305 14.6838
C57BL/6J m 15.3 0.2406 15.7734 14.8266
C57BR/cdJ f 15.6429 0.2406 16.1162 15.1695
C57BR/cdJ m 13.775 0.2251 14.2178 13.3322
C57L/J f 16.3714 0.2406 16.8448 15.8981
C57L/J m 15.5857 0.2406 16.0591 15.1123
CBA/J f 15.75 0.4502 16.6356 14.8644
CBA/J m 14.96 0.2847 15.5201 14.3999
DBA/2J f 13.3833 0.2599 13.8946 12.872
DBA/2J m 13.15 0.2599 13.6613 12.6387
FVB/NJ f 15.2429 0.2406 15.7162 14.7695
FVB/NJ m 15.175 0.1838 15.5365 14.8135
KK/HlJ f 15.4833 0.2599 15.9946 14.972
KK/HlJ m 13.9857 0.2406 14.4591 13.5123
MRL/MpJ f 15.0571 0.2406 15.5305 14.5838
MRL/MpJ m 14.9625 0.2251 15.4053 14.5197
NOD.B10Sn-H2b/J f 16.7571 0.2406 17.2305 16.2838
NOD.B10Sn-H2b/J m 15.9429 0.2406 16.4162 15.4695
NON/ShiLtJ f 14.9 0.2847 15.4601 14.3399
NON/ShiLtJ m 14.9286 0.2406 15.4019 14.4552
NZO/HlLtJ f 14.92 0.2013 15.316 14.524
NZO/HlLtJ m 14.65 0.4502 15.5356 13.7644
NZW/LacJ f 16.6857 0.2406 17.1591 16.2123
NZW/LacJ m 15.5833 0.2599 16.0946 15.072
P/J f 14.7429 0.2406 15.2162 14.2695
P/J m 14.78 0.2847 15.3401 14.2199
PL/J f 14.9125 0.2251 15.3553 14.4697
PL/J m 14.5375 0.2251 14.9803 14.0947
PWD/PhJ f 15.9167 0.2599 16.428 15.4054
PWD/PhJ m 14.3286 0.2406 14.8019 13.8552
RIIIS/J f 14.9375 0.2251 15.3803 14.4947
RIIIS/J m 14.9 0.2251 15.3428 14.4572
SJL/J f 14.8857 0.2406 15.3591 14.4123
SJL/J m 15.05 0.3183 15.6762 14.4238
SM/J f 16.25 0.2599 16.7613 15.7387
SM/J m 15.21 0.2013 15.606 14.814
SWR/J f 16.6429 0.2406 17.1162 16.1695
SWR/J m 16.5625 0.2251 17.0053 16.1197
WSB/EiJ f 15.325 0.2251 15.7678 14.8822
WSB/EiJ m 14.6 0.2122 15.0175 14.1825


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.1589 0.1648 15.483 14.8348
A/J both 14.5286 0.1474 14.8184 14.2387
BALB/cByJ both 14.7089 0.1648 15.033 14.3848
BTBR T+ Itpr3tf/J both 15.49 0.1815 15.847 15.133
BUB/BnJ both 15.6267 0.1928 16.0059 15.2475
C3H/HeJ both 15.8866 0.1648 16.2107 15.5625
C57BL/10J both 14.184 0.1571 14.493 13.8749
C57BL/6J both 15.2286 0.1702 15.5633 14.8939
C57BR/cdJ both 14.7089 0.1648 15.033 14.3848
C57L/J both 15.9786 0.1702 16.3133 15.6439
CBA/J both 15.355 0.2663 15.8789 14.8311
DBA/2J both 13.2667 0.1838 13.6282 12.9051
FVB/NJ both 15.2089 0.1514 15.5067 14.9111
KK/HlJ both 14.7345 0.1771 15.0829 14.3861
MRL/MpJ both 15.0098 0.1648 15.3339 14.6857
NOD.B10Sn-H2b/J both 16.35 0.1702 16.6847 16.0153
NON/ShiLtJ both 14.9143 0.1864 15.281 14.5476
NZO/HlLtJ both 14.785 0.2466 15.2701 14.2999
NZW/LacJ both 16.1345 0.1771 16.4829 15.7861
P/J both 14.7614 0.1864 15.1281 14.3948
PL/J both 14.725 0.1592 15.0381 14.4119
PWD/PhJ both 15.1226 0.1771 15.471 14.7742
RIIIS/J both 14.9187 0.1592 15.2319 14.6056
SJL/J both 14.9679 0.1995 15.3604 14.5754
SM/J both 15.73 0.1644 16.0534 15.4066
SWR/J both 16.6027 0.1648 16.9268 16.2786
WSB/EiJ both 14.9625 0.1547 15.2668 14.6582




  GWAS USING LINEAR MIXED MODELS