Phenotype measure:   Peters4   MCH_M12

ID, description, units MPD:24366   MCH_M12   mean RBC corpuscular hemoglobin content (MCH)   [pg]  at age 12mo
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters4 - mean RBC corpuscular hemoglobin content (MCH) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means15.1   pg 14.9   pg
Median of the strain means15.0   pg 14.6   pg
SD of the strain means± 0.815 ± 0.782
Coefficient of variation (CV)0.0541 0.0526
Min–max range of strain means12.9   –   17.1   pg 13.0   –   16.4   pg
Mean sample size per strain7.7   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.2472 4.2472 19.8009 < 0.0001
strain 29 250.3772 8.6337 40.2515 < 0.0001
sex:strain 29 26.6095 0.9176 4.2778 < 0.0001
Residuals 391 83.8671 0.2145


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.8 0.501   8 0.177 0.0338 13.7, 15.3 -0.31
129S1/SvImJ m 14.6 0.321   7 0.121 0.022 14.1, 15.0 -0.33
A/J f 14.8 0.271   7 0.102 0.0183 14.5, 15.3 -0.31
A/J m 14.4 0.16   6 0.0654 0.0111 14.2, 14.6 -0.59
BALB/cByJ f 14.7 0.162   7 0.0612 0.011 14.4, 14.9 -0.44
BALB/cByJ m 14.6 0.331   7 0.125 0.0227 14.2, 15.1 -0.33
BTBR T+ Itpr3tf/J f 15.8 0.183   8 0.0648 0.0116 15.5, 16.1 0.91
BTBR T+ Itpr3tf/J m 15.5 0.485   8 0.172 0.0313 14.8, 16.0 0.82
BUB/BnJ f 15.1 0.395   7 0.149 0.0261 14.7, 15.8 0.05
BUB/BnJ m 16.2 0.492   6 0.201 0.0303 15.6, 16.8 1.71
C3H/HeJ f 15.6 0.385   8 0.136 0.0248 15.2, 16.2 0.67
C3H/HeJ m 15.6 0.603   7 0.228 0.0386 14.7, 16.3 0.95
C57BL/10J f 13.7 0.323   9 0.108 0.0236 13.2, 14.2 -1.66
C57BL/10J m 14.4 0.315   8 0.111 0.0218 14.0, 15.0 -0.59
C57BL/6J f 14.9 0.397   6 0.162 0.0267 14.5, 15.4 -0.19
C57BL/6J m 14.5 0.232   6 0.0946 0.016 14.1, 14.8 -0.46
C57BLKS/J f 14.3 0.304   7 0.115 0.0213 13.7, 14.5 -0.93
C57BLKS/J m 14.3 0.491   8 0.174 0.0344 13.2, 14.9 -0.72
C57BR/cdJ f 14.9 0.925   8 0.327 0.0622 13.1, 15.9 -0.19
C57BR/cdJ m 15.2 1.03   8 0.365 0.0681 12.9, 16.0 0.43
C57L/J f 16.1 0.403   8 0.143 0.025 15.4, 16.5 1.28
C57L/J m 15.6 0.242   8 0.0854 0.0155 15.2, 15.9 0.95
CAST/EiJ f 14.0 0.49   8 0.173 0.0349 13.2, 14.7 -1.3
CAST/EiJ m 13.8 0.728   6 0.297 0.0529 13.2, 15.2 -1.36
CBA/J f 15.0 0.213   8 0.0754 0.0142 14.8, 15.3 -0.07
CBA/J m 14.5 0.601   7 0.227 0.0414 13.7, 15.2 -0.46
DBA/2J f 12.9 0.26   8 0.0921 0.0202 12.3, 13.1 -2.65
DBA/2J m 13.0 0.718   7 0.271 0.0551 12.2, 14.0 -2.38
FVB/NJ f 15.2 0.203   8 0.0718 0.0134 14.9, 15.6 0.18
FVB/NJ m 14.7 0.486   8 0.172 0.0331 13.7, 15.3 -0.2
KK/HlJ f 14.6 0.652   7 0.246 0.0447 13.3, 15.2 -0.56
KK/HlJ m 14.6 0.591   11 0.178 0.0406 13.8, 15.5 -0.33
LP/J f 15.2 0.325   8 0.115 0.0214 14.5, 15.5 0.18
LP/J m 15.5 0.776   7 0.293 0.0502 14.7, 17.1 0.82
MRL/MpJ f 15.2 0.498   8 0.176 0.0328 14.5, 16.1 0.18
MRL/MpJ m 15.2 0.276   8 0.0977 0.0182 14.8, 15.6 0.43
NOD.B10Sn-H2b/J f 17.1 0.256   8 0.0905 0.015 16.7, 17.5 2.51
NOD.B10Sn-H2b/J m 16.4 0.22   8 0.0779 0.0134 16.0, 16.7 1.97
NON/ShiLtJ f 15.0 0.356   9 0.119 0.0238 14.4, 15.7 -0.07
NON/ShiLtJ m 15.2 0.387   7 0.146 0.0255 14.5, 15.6 0.43
NZO/HlLtJ f 14.3 0.297   6 0.121 0.0207 13.8, 14.7 -0.93
NZO/HlLtJ m 13.1 1.38   6 0.562 0.105 10.7, 14.3 -2.25
NZW/LacJ f 15.9 0.131   8 0.0463 0.00823 15.7, 16.1 1.03
NZW/LacJ m 15.6 0.173   8 0.0611 0.0111 15.3, 15.9 0.95
P/J f 14.6 0.395   7 0.149 0.0271 14.2, 15.3 -0.56
P/J m 14.7 0.265   3 0.153 0.018 14.4, 14.9 -0.2
PL/J f 15.0 0.556   7 0.21 0.0371 14.5, 16.0 -0.07
PL/J m 14.5 0.503   10 0.159 0.0348 13.6, 15.2 -0.46
PWD/PhJ f 15.5 0.271   8 0.0959 0.0175 15.0, 15.8 0.54
PWD/PhJ m 15.1 0.472   8 0.167 0.0313 14.1, 15.5 0.31
RIIIS/J f 16.2 0.158   8 0.0559 0.00978 16.0, 16.4 1.4
RIIIS/J m 14.6 0.439   7 0.166 0.0301 13.6, 14.9 -0.33
SJL/J f 14.6 0.367   7 0.139 0.0252 14.2, 15.3 -0.56
SJL/J m 14.5 0.462   8 0.163 0.0318 13.9, 15.5 -0.46
SM/J f 15.6 0.466   8 0.165 0.0298 14.8, 16.1 0.67
SM/J m 15.4 0.393   8 0.139 0.0256 15.0, 16.2 0.69
SWR/J f 16.0 0.293   7 0.111 0.0183 15.6, 16.3 1.16
SWR/J m 15.9 0.282   8 0.0996 0.0177 15.3, 16.2 1.33
WSB/EiJ f 15.1 0.167   9 0.0556 0.011 14.9, 15.4 0.05
WSB/EiJ m 14.6 0.198   7 0.0747 0.0136 14.3, 14.9 -0.33


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.85 0.1637 15.1719 14.5281
129S1/SvImJ m 14.5571 0.175 14.9013 14.213
A/J f 14.8 0.175 15.1442 14.4558
A/J m 14.3833 0.1891 14.7551 14.0116
BALB/cByJ f 14.7429 0.175 15.087 14.3987
BALB/cByJ m 14.5571 0.175 14.9013 14.213
BTBR T+ Itpr3tf/J f 15.825 0.1637 16.1469 15.5031
BTBR T+ Itpr3tf/J m 15.5125 0.1637 15.8344 15.1906
BUB/BnJ f 15.1429 0.175 15.487 14.7987
BUB/BnJ m 16.2167 0.1891 16.5884 15.8449
C3H/HeJ f 15.55 0.1637 15.8719 15.2281
C3H/HeJ m 15.6 0.175 15.9442 15.2558
C57BL/10J f 13.7222 0.1544 14.0257 13.4187
C57BL/10J m 14.425 0.1637 14.7469 14.1031
C57BL/6J f 14.8833 0.1891 15.2551 14.5116
C57BL/6J m 14.5167 0.1891 14.8884 14.1449
C57BLKS/J f 14.2714 0.175 14.6156 13.9273
C57BLKS/J m 14.2875 0.1637 14.6094 13.9656
C57BR/cdJ f 14.875 0.1637 15.1969 14.5531
C57BR/cdJ m 15.175 0.1637 15.4969 14.8531
C57L/J f 16.1375 0.1637 16.4594 15.8156
C57L/J m 15.6125 0.1637 15.9344 15.2906
CAST/EiJ f 14.0375 0.1637 14.3594 13.7156
CAST/EiJ m 13.7667 0.1891 14.1384 13.3949
CBA/J f 15.0375 0.1637 15.3594 14.7156
CBA/J m 14.5143 0.175 14.8584 14.1701
DBA/2J f 12.875 0.1637 13.1969 12.5531
DBA/2J m 13.0286 0.175 13.3727 12.6844
FVB/NJ f 15.2125 0.1637 15.5344 14.8906
FVB/NJ m 14.675 0.1637 14.9969 14.3531
KK/HlJ f 14.5857 0.175 14.9299 14.2416
KK/HlJ m 14.5545 0.1396 14.8291 14.28
LP/J f 15.2 0.1637 15.5219 14.8781
LP/J m 15.4571 0.175 15.8013 15.113
MRL/MpJ f 15.175 0.1637 15.4969 14.8531
MRL/MpJ m 15.175 0.1637 15.4969 14.8531
NOD.B10Sn-H2b/J f 17.0625 0.1637 17.3844 16.7406
NOD.B10Sn-H2b/J m 16.45 0.1637 16.7719 16.1281
NON/ShiLtJ f 14.9778 0.1544 15.2813 14.6743
NON/ShiLtJ m 15.2 0.175 15.5442 14.8558
NZO/HlLtJ f 14.3 0.1891 14.6717 13.9283
NZO/HlLtJ m 13.0833 0.1891 13.4551 12.7116
NZW/LacJ f 15.9 0.1637 16.2219 15.5781
NZW/LacJ m 15.5875 0.1637 15.9094 15.2656
P/J f 14.5571 0.175 14.9013 14.213
P/J m 14.7 0.2674 15.2257 14.1743
PL/J f 14.9714 0.175 15.3156 14.6273
PL/J m 14.47 0.1465 14.7579 14.1821
PWD/PhJ f 15.475 0.1637 15.7969 15.1531
PWD/PhJ m 15.0625 0.1637 15.3844 14.7406
RIIIS/J f 16.175 0.1637 16.4969 15.8531
RIIIS/J m 14.5714 0.175 14.9156 14.2273
SJL/J f 14.5857 0.175 14.9299 14.2416
SJL/J m 14.525 0.1637 14.8469 14.2031
SM/J f 15.6375 0.1637 15.9594 15.3156
SM/J m 15.35 0.1637 15.6719 15.0281
SWR/J f 15.9714 0.175 16.3156 15.6273
SWR/J m 15.875 0.1637 16.1969 15.5531
WSB/EiJ f 15.1444 0.1544 15.448 14.8409
WSB/EiJ m 14.5714 0.175 14.9156 14.2273


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 14.7036 0.1198 14.9392 14.4679
A/J both 14.5917 0.1288 14.845 14.3384
BALB/cByJ both 14.65 0.1238 14.8934 14.4066
BTBR T+ Itpr3tf/J both 15.6688 0.1158 15.8964 15.4411
BUB/BnJ both 15.6798 0.1288 15.9331 15.4265
C3H/HeJ both 15.575 0.1198 15.8106 15.3394
C57BL/10J both 14.0736 0.1125 14.2948 13.8524
C57BL/6J both 14.7 0.1337 14.9629 14.4371
C57BLKS/J both 14.2795 0.1198 14.5151 14.0438
C57BR/cdJ both 15.025 0.1158 15.2526 14.7974
C57L/J both 15.875 0.1158 16.1026 15.6474
CAST/EiJ both 13.9021 0.1251 14.148 13.6562
CBA/J both 14.7759 0.1198 15.0115 14.5403
DBA/2J both 12.9518 0.1198 13.1874 12.7162
FVB/NJ both 14.9438 0.1158 15.1714 14.7161
KK/HlJ both 14.5701 0.112 14.7903 14.35
LP/J both 15.3286 0.1198 15.5642 15.0929
MRL/MpJ both 15.175 0.1158 15.4026 14.9474
NOD.B10Sn-H2b/J both 16.7563 0.1158 16.9839 16.5286
NON/ShiLtJ both 15.0889 0.1167 15.3183 14.8595
NZO/HlLtJ both 13.6917 0.1337 13.9545 13.4288
NZW/LacJ both 15.7438 0.1158 15.9714 15.5161
P/J both 14.6286 0.1598 14.9427 14.3144
PL/J both 14.7207 0.1141 14.9451 14.4964
PWD/PhJ both 15.2688 0.1158 15.4964 15.0411
RIIIS/J both 15.3732 0.1198 15.6088 15.1376
SJL/J both 14.5554 0.1198 14.791 14.3197
SM/J both 15.4938 0.1158 15.7214 15.2661
SWR/J both 15.9232 0.1198 16.1588 15.6876
WSB/EiJ both 14.8579 0.1167 15.0874 14.6285




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.