Project measure / variable:   Peters4   MCH_M06

ID, description, units MPD:24365   MCH_M06   mean RBC corpuscular hemoglobin content (MCH)   [pg]  at age 6mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - mean RBC corpuscular hemoglobin content (MCH) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means15.4   pg 15.0   pg
Median of the strain means15.4   pg 14.9   pg
SD of the strain means± 0.787 ± 0.936
Coefficient of variation (CV)0.0512 0.0622
Min–max range of strain means12.9   –   16.8   pg 13.1   –   16.8   pg
Mean sample size per strain7.7   mice 7.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6.0546 6.0546 21.3519 < 0.0001
strain 29 241.5784 8.3303 29.3774 < 0.0001
sex:strain 29 73.0375 2.5185 8.8818 < 0.0001
Residuals 386 109.4548 0.2836


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.6 0.717   8 0.254 0.0492 13.5, 15.4 -0.97
129S1/SvImJ m 15.8 0.205   11 0.0618 0.013 15.4, 16.1 0.82
A/J f 15.7 0.817   5 0.365 0.052 15.1, 17.1 0.42
A/J m 14.1 0.646   8 0.228 0.046 13.2, 14.8 -1.0
BALB/cByJ f 15.3 0.288   6 0.117 0.0188 14.9, 15.7 -0.08
BALB/cByJ m 15.9 0.283   8 0.0999 0.0178 15.5, 16.2 0.92
BTBR T+ Itpr3tf/J f 16.8 1.11   8 0.393 0.066 16.1, 19.2 1.82
BTBR T+ Itpr3tf/J m 15.7 0.648   7 0.245 0.0411 14.4, 16.4 0.71
BUB/BnJ f 16.0 0.32   8 0.113 0.02 15.5, 16.5 0.81
BUB/BnJ m 16.8 0.546   7 0.206 0.0325 16.0, 17.7 1.88
C3H/HeJ f 15.8 0.337   8 0.119 0.0214 15.1, 16.1 0.55
C3H/HeJ m 15.2 0.521   8 0.184 0.0342 14.9, 16.5 0.17
C57BL/10J f 14.9 1.04   8 0.369 0.0702 12.3, 15.5 -0.59
C57BL/10J m 14.1 0.823   5 0.368 0.0586 13.0, 15.2 -1.0
C57BL/6J f 14.7 0.542   8 0.192 0.0369 13.9, 15.8 -0.85
C57BL/6J m 14.6 0.293   7 0.111 0.0201 14.0, 14.9 -0.47
C57BLKS/J f 14.3 0.177   8 0.0627 0.0124 14.1, 14.6 -1.36
C57BLKS/J m 14.3 0.628   7 0.237 0.044 13.2, 14.8 -0.79
C57BR/cdJ f 16.2 0.263   7 0.0993 0.0162 15.8, 16.5 1.06
C57BR/cdJ m 16.1 0.256   8 0.0906 0.016 15.8, 16.5 1.14
C57L/J f 15.6 0.395   7 0.149 0.0254 15.1, 16.3 0.3
C57L/J m 14.6 0.694   8 0.245 0.0475 13.4, 15.5 -0.47
CAST/EiJ f 14.8 0.997   10 0.315 0.0676 13.6, 17.4 -0.72
CAST/EiJ m 14.2 0.212   2   0.15 0.0149 14.1, 14.4 -0.89
CBA/J f 15.0 0.103   6 0.0422 0.00687 14.9, 15.2 -0.47
CBA/J m 14.3 0.369   8 0.131 0.0259 13.8, 14.8 -0.79
DBA/2J f 12.9 0.715   7 0.27 0.0555 11.3, 13.4 -3.14
DBA/2J m 14.0 0.436   6 0.178 0.0311 13.3, 14.5 -1.11
FVB/NJ f 15.8 0.169   8 0.0598 0.0107 15.5, 16.0 0.55
FVB/NJ m 14.3 1.06   5 0.474 0.0743 13.4, 16.1 -0.79
KK/HlJ f 15.3 0.117   6 0.0477 0.00765 15.1, 15.4 -0.08
KK/HlJ m 14.3 0.929   8 0.328 0.0648 12.8, 15.2 -0.79
LP/J f 16.3 0.261   6 0.106 0.016 16.0, 16.7 1.19
LP/J m 14.8 0.498   8 0.176 0.0337 14.1, 15.4 -0.25
MRL/MpJ f 14.8 1.08   8 0.381 0.0728 12.4, 15.8 -0.72
MRL/MpJ m 15.2 0.259   5 0.116 0.017 14.9, 15.5 0.17
NOD.B10Sn-H2b/J f 16.1 0.181   8 0.0639 0.0112 15.8, 16.4 0.93
NOD.B10Sn-H2b/J m 16.6 0.207   8 0.0732 0.0125 16.2, 16.8 1.67
NON/ShiLtJ f 16.2 0.23   8 0.0811 0.0142 15.9, 16.6 1.06
NON/ShiLtJ m 15.3 0.283   6 0.115 0.0185 14.9, 15.6 0.28
NZO/HlLtJ f 15.2 0.387   8 0.137 0.0254 14.5, 15.7 -0.21
NZO/HlLtJ m 13.1 0.482   6 0.197 0.0368 12.6, 14.0 -2.07
NZW/LacJ f 15.7 0.175   8 0.062 0.0112 15.3, 15.9 0.42
NZW/LacJ m 14.7 0.694   6 0.283 0.0473 13.4, 15.5 -0.36
P/J f 14.6 0.16   8 0.0567 0.011 14.4, 14.8 -0.97
P/J m 14.4 0.988   8 0.349 0.0685 13.6, 16.8 -0.68
PL/J f 15.4 0.205   13 0.0568 0.0133 15.1, 15.8 0.04
PL/J m 14.6 0.149   8 0.0526 0.0102 14.4, 14.8 -0.47
PWD/PhJ f 15.7 0.214   8 0.0756 0.0137 15.4, 16.0 0.42
PWD/PhJ m 15.6 0.19   7 0.0719 0.0122 15.3, 15.8 0.6
RIIIS/J f 15.3 0.318   8 0.113 0.0208 14.6, 15.7 -0.08
RIIIS/J m 15.1 0.162   7 0.0612 0.0107 14.9, 15.4 0.07
SJL/J f 14.8 0.83   8 0.293 0.0559 13.4, 16.0 -0.72
SJL/J m 15.0 0.514   8 0.182 0.0343 14.4, 16.1 -0.04
SM/J f 16.1 0.668   6 0.273 0.0415 15.0, 16.6 0.93
SM/J m 16.8 0.238   8 0.084 0.0142 16.3, 17.0 1.88
SWR/J f 16.3 0.173   8 0.0611 0.0106 16.0, 16.5 1.19
SWR/J m 16.7 0.236   8 0.0833 0.0141 16.4, 17.0 1.78
WSB/EiJ f 14.8 0.36   10 0.114 0.0244 14.2, 15.2 -0.72
WSB/EiJ m 14.9 0.212   7 0.08 0.0142 14.7, 15.3 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.5625 0.1883 14.9327 14.1923
129S1/SvImJ m 15.8 0.1606 16.1157 15.4843
A/J f 15.72 0.2381 16.1882 15.2518
A/J m 14.05 0.1883 14.4202 13.6798
BALB/cByJ f 15.3333 0.2174 15.7608 14.9059
BALB/cByJ m 15.8625 0.1883 16.2327 15.4923
BTBR T+ Itpr3tf/J f 16.85 0.1883 17.2202 16.4798
BTBR T+ Itpr3tf/J m 15.7429 0.2013 16.1386 15.3471
BUB/BnJ f 16.0375 0.1883 16.4077 15.6673
BUB/BnJ m 16.7857 0.2013 17.1814 16.39
C3H/HeJ f 15.775 0.1883 16.1452 15.4048
C3H/HeJ m 15.25 0.1883 15.6202 14.8798
C57BL/10J f 14.8625 0.1883 15.2327 14.4923
C57BL/10J m 14.06 0.2381 14.5282 13.5918
C57BL/6J f 14.675 0.1883 15.0452 14.3048
C57BL/6J m 14.5714 0.2013 14.9671 14.1757
C57BLKS/J f 14.35 0.1883 14.7202 13.9798
C57BLKS/J m 14.2857 0.2013 14.6814 13.89
C57BR/cdJ f 16.1714 0.2013 16.5671 15.7757
C57BR/cdJ m 16.05 0.1883 16.4202 15.6798
C57L/J f 15.5571 0.2013 15.9529 15.1614
C57L/J m 14.625 0.1883 14.9952 14.2548
CAST/EiJ f 14.75 0.1684 15.0811 14.4189
CAST/EiJ m 14.25 0.3765 14.9903 13.5097
CBA/J f 15.0333 0.2174 15.4608 14.6059
CBA/J m 14.275 0.1883 14.6452 13.9048
DBA/2J f 12.8857 0.2013 13.2814 12.49
DBA/2J m 13.9833 0.2174 14.4108 13.5559
FVB/NJ f 15.75 0.1883 16.1202 15.3798
FVB/NJ m 14.26 0.2381 14.7282 13.7918
KK/HlJ f 15.2833 0.2174 15.7108 14.8559
KK/HlJ m 14.3375 0.1883 14.7077 13.9673
LP/J f 16.3 0.2174 16.7274 15.8726
LP/J m 14.775 0.1883 15.1452 14.4048
MRL/MpJ f 14.8125 0.1883 15.1827 14.4423
MRL/MpJ m 15.22 0.2381 15.6882 14.7518
NOD.B10Sn-H2b/J f 16.0875 0.1883 16.4577 15.7173
NOD.B10Sn-H2b/J m 16.55 0.1883 16.9202 16.1798
NON/ShiLtJ f 16.2125 0.1883 16.5827 15.8423
NON/ShiLtJ m 15.3 0.2174 15.7274 14.8726
NZO/HlLtJ f 15.2125 0.1883 15.5827 14.8423
NZO/HlLtJ m 13.1 0.2174 13.5274 12.6726
NZW/LacJ f 15.675 0.1883 16.0452 15.3048
NZW/LacJ m 14.6833 0.2174 15.1108 14.2559
P/J f 14.55 0.1883 14.9202 14.1798
P/J m 14.4375 0.1883 14.8077 14.0673
PL/J f 15.3769 0.1477 15.6673 15.0865
PL/J m 14.625 0.1883 14.9952 14.2548
PWD/PhJ f 15.65 0.1883 16.0202 15.2798
PWD/PhJ m 15.5571 0.2013 15.9529 15.1614
RIIIS/J f 15.3125 0.1883 15.6827 14.9423
RIIIS/J m 15.1429 0.2013 15.5386 14.7471
SJL/J f 14.8375 0.1883 15.2077 14.4673
SJL/J m 14.9875 0.1883 15.3577 14.6173
SM/J f 16.0833 0.2174 16.5108 15.6559
SM/J m 16.775 0.1883 17.1452 16.4048
SWR/J f 16.2875 0.1883 16.6577 15.9173
SWR/J m 16.7125 0.1883 17.0827 16.3423
WSB/EiJ f 14.79 0.1684 15.1211 14.4589
WSB/EiJ m 14.9143 0.2013 15.31 14.5186


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.1812 0.1237 15.4245 14.938
A/J both 14.885 0.1518 15.1834 14.5866
BALB/cByJ both 15.5979 0.1438 15.8806 15.3152
BTBR T+ Itpr3tf/J both 16.2964 0.1378 16.5674 16.0255
BUB/BnJ both 16.4116 0.1378 16.6825 16.1407
C3H/HeJ both 15.5125 0.1331 15.7742 15.2508
C57BL/10J both 14.4613 0.1518 14.7597 14.1628
C57BL/6J both 14.6232 0.1378 14.8941 14.3523
C57BLKS/J both 14.3179 0.1378 14.5888 14.0469
C57BR/cdJ both 16.1107 0.1378 16.3816 15.8398
C57L/J both 15.0911 0.1378 15.362 14.8201
CAST/EiJ both 14.5 0.2062 14.9055 14.0945
CBA/J both 14.6542 0.1438 14.9369 14.3715
DBA/2J both 13.4345 0.1481 13.7258 13.1433
FVB/NJ both 15.005 0.1518 15.3034 14.7066
KK/HlJ both 14.8104 0.1438 15.0931 14.5277
LP/J both 15.5375 0.1438 15.8202 15.2548
MRL/MpJ both 15.0163 0.1518 15.3147 14.7178
NOD.B10Sn-H2b/J both 16.3188 0.1331 16.5805 16.057
NON/ShiLtJ both 15.7563 0.1438 16.039 15.4735
NZO/HlLtJ both 14.1563 0.1438 14.439 13.8735
NZW/LacJ both 15.1792 0.1438 15.4619 14.8965
P/J both 14.4938 0.1331 14.7555 14.232
PL/J both 15.001 0.1196 15.2362 14.7657
PWD/PhJ both 15.6036 0.1378 15.8745 15.3326
RIIIS/J both 15.2277 0.1378 15.4986 14.9567
SJL/J both 14.9125 0.1331 15.1742 14.6508
SM/J both 16.4292 0.1438 16.7119 16.1465
SWR/J both 16.5 0.1331 16.7617 16.2383
WSB/EiJ both 14.8521 0.1312 15.1101 14.5942




  GWAS USING LINEAR MIXED MODELS