Project measure / variable:   Peters4   HGB_M18

ID, description, units MPD:24363   HGB_M18   hemoglobin (HGB)   [g/dL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - hemoglobin (HGB) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means15.0   g/dL 14.7   g/dL
Median of the strain means15.2   g/dL 14.6   g/dL
SD of the strain means± 1.08 ± 1.11
Coefficient of variation (CV)0.0719 0.0756
Min–max range of strain means12.2   –   17.0   g/dL 12.7   –   16.6   g/dL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.2592 11.2592 10.0914 0.0016
strain 26 356.6209 13.7162 12.2935 < 0.0001
sex:strain 26 104.9015 4.0347 3.6162 < 0.0001
Residuals 333 371.5368 1.1157


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.0 0.873   8 0.309 0.0515 15.6, 18.4 1.87
129S1/SvImJ m 16.5 0.638   7 0.241 0.0386 15.4, 17.4 1.6
A/J f 13.7 0.868   7 0.328 0.0634 12.7, 15.4 -1.19
A/J m 13.8 1.05   14 0.281 0.0762 11.2, 15.8 -0.83
BALB/cByJ f 15.9 0.374   8 0.132 0.0235 15.5, 16.6 0.85
BALB/cByJ m 14.7 0.814   7 0.308 0.0554 13.0, 15.5 -0.02
BTBR T+ Itpr3tf/J f 12.2 2.32   8 0.82 0.191 8.6, 14.8 -2.59
BTBR T+ Itpr3tf/J m 14.2 0.707   5 0.316 0.0498 13.2, 15.0 -0.47
BUB/BnJ f 15.3 0.327   5 0.146 0.0214 14.8, 15.6 0.29
BUB/BnJ m 15.7 0.565   6 0.23 0.0359 15.1, 16.6 0.88
C3H/HeJ f 14.5 0.438   7 0.165 0.0302 14.0, 15.1 -0.45
C3H/HeJ m 14.1 1.6   8 0.564 0.113 10.2, 15.0 -0.56
C57BL/10J f 14.3 1.21   6 0.495 0.0847 12.9, 16.1 -0.64
C57BL/10J m 14.6 0.643   13 0.178 0.044 13.2, 15.4 -0.11
C57BL/6J f 16.0 0.544   7 0.206 0.0341 15.4, 16.9 0.94
C57BL/6J m 15.3 0.58   7 0.219 0.0378 14.6, 16.4 0.52
C57BLKS/J m 15.1 0.383   16 0.0957 0.0254 14.4, 15.7 0.34
C57BR/cdJ f 15.4 0.748   8 0.265 0.0487 14.1, 16.1 0.38
C57BR/cdJ m 15.7 1.17   8 0.414 0.0744 13.9, 17.1 0.88
C57L/J f 15.8 0.341   7 0.129 0.0216 15.4, 16.4 0.76
C57L/J m 15.6 1.28   7 0.484 0.0822 13.2, 16.6 0.79
CAST/EiJ f 15.9 0.42   8 0.149 0.0265 15.1, 16.6 0.85
CBA/J f 14.2 0.566   2   0.4 0.0398 13.8, 14.6 -0.73
CBA/J m 13.9 0.963   5 0.431 0.0694 12.5, 15.2 -0.74
DBA/2J f 15.2 0.301   6 0.123 0.0198 14.7, 15.5 0.2
DBA/2J m 14.6 1.06   6 0.433 0.0724 13.2, 16.5 -0.11
FVB/NJ f 14.4 0.794   7 0.3 0.0551 13.5, 15.5 -0.54
FVB/NJ m 12.7 1.54   12 0.445 0.121 8.7, 14.3 -1.82
KK/HlJ f 15.4 1.02   6 0.415 0.0662 14.3, 16.8 0.38
KK/HlJ m 13.8 0.373   7 0.141 0.027 13.3, 14.3 -0.83
LP/J m 16.6 0.729   8 0.258 0.044 15.3, 17.8 1.69
MRL/MpJ f 13.4 2.15   7 0.814 0.161 9.8, 16.4 -1.47
MRL/MpJ m 14.7 1.81   8 0.641 0.123 10.8, 16.4 -0.02
NOD.B10Sn-H2b/J f 14.0 1.61   7 0.607 0.114 11.7, 15.8 -0.92
NOD.B10Sn-H2b/J m 15.4 0.809   7 0.306 0.0526 14.3, 16.7 0.61
NON/ShiLtJ f 14.0 1.31   5 0.588 0.0942 11.9, 15.1 -0.92
NON/ShiLtJ m 13.3 2.4   7 0.909 0.181 9.0, 16.5 -1.28
NZO/HlLtJ f 14.9 0.826   10 0.261 0.0555 13.7, 16.3 -0.08
NZO/HlLtJ m 13.7 0.707   2   0.5 0.0516 13.2, 14.2 -0.92
NZW/LacJ f 13.7 0.601   7 0.227 0.0438 12.9, 14.7 -1.19
NZW/LacJ m 14.1 0.283   6 0.115 0.0201 13.8, 14.6 -0.56
P/J f 15.6 0.887   7 0.335 0.0567 13.8, 16.7 0.57
P/J m 14.0 1.59   5 0.709 0.113 12.0, 15.5 -0.65
PL/J f 15.7 1.06   8 0.374 0.0674 13.9, 16.6 0.66
PL/J m 14.4 1.34   9 0.446 0.0931 11.5, 16.2 -0.29
PWD/PhJ f 16.6 0.407   6 0.166 0.0245 15.9, 17.0 1.5
PWD/PhJ m 16.5 0.455   7 0.172 0.0276 15.8, 17.0 1.6
RIIIS/J f 14.7 0.64   8 0.226 0.0435 13.9, 15.8 -0.27
RIIIS/J m 15.5 0.381   8 0.135 0.0246 14.8, 16.0 0.7
SJL/J f 14.3 0.574   7 0.217 0.04 13.5, 15.4 -0.64
SJL/J m 13.2 1.15   4 0.576 0.0872 11.7, 14.5 -1.37
SM/J f 15.8 0.404   6 0.165 0.0256 15.2, 16.2 0.76
SM/J m 13.0 1.05   10 0.331 0.0805 10.3, 14.2 -1.55
SWR/J f 15.9 0.774   7 0.293 0.0486 14.8, 17.0 0.85
SWR/J m 16.2 0.41   8 0.145 0.0253 15.4, 16.8 1.33
WSB/EiJ f 15.8 0.867   8 0.306 0.055 14.5, 16.7 0.76
WSB/EiJ m 16.1 0.552   9 0.184 0.0342 15.5, 17.2 1.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.9625 0.3735 17.6971 16.2279
129S1/SvImJ m 16.5 0.3992 17.2853 15.7147
A/J f 13.7 0.3992 14.4853 12.9147
A/J m 13.8214 0.2823 14.3767 13.2661
BALB/cByJ f 15.95 0.3735 16.6846 15.2154
BALB/cByJ m 14.7 0.3992 15.4853 13.9147
BTBR T+ Itpr3tf/J f 12.175 0.3735 12.9096 11.4404
BTBR T+ Itpr3tf/J m 14.2 0.4724 15.1292 13.2708
BUB/BnJ f 15.28 0.4724 16.2092 14.3508
BUB/BnJ m 15.7333 0.4312 16.5816 14.8851
C3H/HeJ f 14.4857 0.3992 15.2711 13.7004
C3H/HeJ m 14.0625 0.3735 14.7971 13.3279
C57BL/10J f 14.3167 0.4312 15.1649 13.4684
C57BL/10J m 14.6231 0.293 15.1994 14.0468
C57BL/6J f 15.9571 0.3992 16.7425 15.1718
C57BL/6J m 15.3429 0.3992 16.1282 14.5575
C57BR/cdJ f 15.3625 0.3735 16.0971 14.6279
C57BR/cdJ m 15.7375 0.3735 16.4721 15.0029
C57L/J f 15.7571 0.3992 16.5425 14.9718
C57L/J m 15.5714 0.3992 16.3568 14.7861
CBA/J f 14.2 0.7469 15.6692 12.7308
CBA/J m 13.88 0.4724 14.8092 12.9508
DBA/2J f 15.2333 0.4312 16.0816 14.3851
DBA/2J m 14.6333 0.4312 15.4816 13.7851
FVB/NJ f 14.4 0.3992 15.1853 13.6147
FVB/NJ m 12.6917 0.3049 13.2915 12.0919
KK/HlJ f 15.3667 0.4312 16.2149 14.5184
KK/HlJ m 13.8286 0.3992 14.6139 13.0432
MRL/MpJ f 13.3571 0.3992 14.1425 12.5718
MRL/MpJ m 14.7 0.3735 15.4346 13.9654
NOD.B10Sn-H2b/J f 14.0286 0.3992 14.8139 13.2432
NOD.B10Sn-H2b/J m 15.3857 0.3992 16.1711 14.6004
NON/ShiLtJ f 13.96 0.4724 14.8892 13.0308
NON/ShiLtJ m 13.3 0.3992 14.0853 12.5147
NZO/HlLtJ f 14.88 0.334 15.5371 14.2229
NZO/HlLtJ m 13.7 0.7469 15.1692 12.2308
NZW/LacJ f 13.7143 0.3992 14.4996 12.9289
NZW/LacJ m 14.1 0.4312 14.9483 13.2517
P/J f 15.6429 0.3992 16.4282 14.8575
P/J m 14.0 0.4724 14.9292 13.0708
PL/J f 15.7 0.3735 16.4346 14.9654
PL/J m 14.3556 0.3521 15.0482 13.6629
PWD/PhJ f 16.6167 0.4312 17.4649 15.7684
PWD/PhJ m 16.5 0.3992 17.2853 15.7147
RIIIS/J f 14.7125 0.3735 15.4471 13.9779
RIIIS/J m 15.475 0.3735 16.2096 14.7404
SJL/J f 14.3286 0.3992 15.1139 13.5432
SJL/J m 13.225 0.5281 14.2639 12.1861
SM/J f 15.75 0.4312 16.5983 14.9017
SM/J m 12.99 0.334 13.6471 12.3329
SWR/J f 15.9429 0.3992 16.7282 15.1575
SWR/J m 16.175 0.3735 16.9096 15.4404
WSB/EiJ f 15.7625 0.3735 16.4971 15.0279
WSB/EiJ m 16.1333 0.3521 16.8259 15.4407


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 16.7313 0.2733 17.2689 16.1936
A/J both 13.7607 0.2445 14.2416 13.2798
BALB/cByJ both 15.325 0.2733 15.8627 14.7873
BTBR T+ Itpr3tf/J both 13.1875 0.3011 13.7798 12.5952
BUB/BnJ both 15.5067 0.3198 16.1358 14.8776
C3H/HeJ both 14.2741 0.2733 14.8118 13.7364
C57BL/10J both 14.4699 0.2607 14.9826 13.9571
C57BL/6J both 15.65 0.2823 16.2053 15.0947
C57BR/cdJ both 15.55 0.2641 16.0695 15.0305
C57L/J both 15.6643 0.2823 16.2196 15.109
CBA/J both 14.04 0.4419 14.9092 13.1708
DBA/2J both 14.9333 0.3049 15.5331 14.3335
FVB/NJ both 13.5458 0.2512 14.0399 13.0517
KK/HlJ both 14.5976 0.2938 15.1756 14.0196
MRL/MpJ both 14.0286 0.2733 14.5663 13.4909
NOD.B10Sn-H2b/J both 14.7071 0.2823 15.2625 14.1518
NON/ShiLtJ both 13.63 0.3092 14.2383 13.0217
NZO/HlLtJ both 14.29 0.4091 15.0947 13.4853
NZW/LacJ both 13.9071 0.2938 14.4851 13.3291
P/J both 14.8214 0.3092 15.4298 14.2131
PL/J both 15.0278 0.2566 15.5326 14.523
PWD/PhJ both 16.5583 0.2938 17.1363 15.9803
RIIIS/J both 15.0938 0.2641 15.6132 14.5743
SJL/J both 13.7768 0.331 14.428 13.1256
SM/J both 14.37 0.2727 14.9065 13.8335
SWR/J both 16.0589 0.2733 16.5966 15.5212
WSB/EiJ both 15.9479 0.2566 16.4527 15.4431




  GWAS USING LINEAR MIXED MODELS