Project measure / variable:   Peters4   pctHCT_M24

ID, description, units MPD:24360   pctHCT_M24   hematocrit (HCT)   [%]  at age 24mo  
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - hematocrit (HCT) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means46.2   % 45.0   %
Median of the strain means47.4   % 44.7   %
SD of the strain means± 4.49 ± 3.25
Coefficient of variation (CV)0.0972 0.0722
Min–max range of strain means37.5   –   51.9   % 40.0   –   50.9   %
Mean sample size per strain6.7   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 12.6574 12.6574 0.6482 0.4224
strain 9 1783.4772 198.1641 10.1485 < 0.0001
sex:strain 9 340.7821 37.8647 1.9392 0.0527
Residuals 119 2323.6385 19.5264


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 48.2 4.89   8 1.73 0.101 37.4, 52.6 0.44
129S1/SvImJ m 50.9 4.38   12 1.26 0.0859 41.9, 59.3 1.82
A/J m 43.1 1.7   2   1.2 0.0394 41.9, 44.3 -0.58
BALB/cByJ f 43.8 4.43   6 1.81 0.101 34.9, 46.5 -0.54
C57BL/10J f 46.4 4.06   7 1.53 0.0874 41.3, 51.0 0.04
C57BL/10J m 42.1 5.92   8 2.09 0.141 30.1, 49.9 -0.89
C57BL/6J f 45.7 5.16   6 2.11 0.113 37.9, 51.7 -0.12
C57BL/6J m 43.7 2.94   7 1.11 0.0674 38.7, 46.6 -0.4
C57BLKS/J f 51.9 3.25   6 1.33 0.0625 47.9, 55.2 1.26
C57BLKS/J m 47.6 1.81   7 0.685 0.0381 44.9, 49.9 0.81
C57BR/cdJ f 47.4 1.9   7 0.717 0.04 45.1, 49.8 0.26
C57BR/cdJ m 45.5 7.48   6 3.05 0.164 30.4, 49.5 0.16
LP/J f 48.6 2.5   7 0.945 0.0514 43.5, 51.3 0.53
LP/J m 48.8 2.5   5 1.12 0.0513 45.9, 52.8 1.17
NON/ShiLtJ f 39.2 5.76   7 2.18 0.147 31.7, 46.8 -1.56
NON/ShiLtJ m 43.9 3.23   6 1.32 0.0737 39.3, 49.3 -0.33
NZW/LacJ f 37.5 7.17   7 2.71 0.191 27.8, 51.3 -1.94
NZW/LacJ m 40.0 3.98   7 1.51 0.0996 33.5, 45.0 -1.53
PWD/PhJ f 50.2 2.61   6 1.07 0.052 46.4, 53.2 0.88
PWD/PhJ m 47.2 6.72   6 2.74 0.142 36.7, 55.6 0.68
SM/J m 41.2 5.07   7 1.92 0.123 37.0, 50.4 -1.16
WSB/EiJ f 49.6 2.51   7 0.947 0.0505 46.1, 54.2 0.75
WSB/EiJ m 45.8 2.15   7 0.811 0.0469 42.7, 49.2 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 48.2 1.5623 51.2935 45.1065
129S1/SvImJ m 50.925 1.2756 53.4508 48.3992
C57BL/10J f 46.4286 1.6702 49.7357 43.1215
C57BL/10J m 42.0625 1.5623 45.156 38.969
C57BL/6J f 45.7333 1.804 49.3054 42.1612
C57BL/6J m 43.6714 1.6702 46.9785 40.3643
C57BLKS/J f 51.9333 1.804 55.5054 48.3612
C57BLKS/J m 47.6143 1.6702 50.9214 44.3072
C57BR/cdJ f 47.4286 1.6702 50.7357 44.1215
C57BR/cdJ m 45.5333 1.804 49.1054 41.9612
LP/J f 48.6429 1.6702 51.95 45.3357
LP/J m 48.76 1.9762 52.673 44.847
NON/ShiLtJ f 39.1857 1.6702 42.4928 35.8786
NON/ShiLtJ m 43.9 1.804 47.4721 40.3279
NZW/LacJ f 37.5143 1.6702 40.8214 34.2072
NZW/LacJ m 40.0 1.6702 43.3071 36.6929
PWD/PhJ f 50.2167 1.804 53.7888 46.6446
PWD/PhJ m 47.1833 1.804 50.7554 43.6112
WSB/EiJ f 49.5714 1.6702 52.8785 46.2643
WSB/EiJ m 45.7857 1.6702 49.0928 42.4786


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 49.5625 1.0085 51.5594 47.5656
C57BL/10J both 44.2455 1.1435 46.5098 41.9813
C57BL/6J both 44.7024 1.2292 47.1363 42.2684
C57BLKS/J both 49.7738 1.2292 52.2078 47.3398
C57BR/cdJ both 46.481 1.2292 48.9149 44.047
LP/J both 48.7014 1.2937 51.2631 46.1398
NON/ShiLtJ both 41.5429 1.2292 43.9768 39.1089
NZW/LacJ both 38.7571 1.181 41.0956 36.4187
PWD/PhJ both 48.7 1.2756 51.2258 46.1742
WSB/EiJ both 47.6786 1.181 50.0171 45.3401




  GWAS USING LINEAR MIXED MODELS