Project measure / variable:   Peters4   pctHCT_M12

ID, description, units MPD:24358   pctHCT_M12   hematocrit (HCT)   [%]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - hematocrit (HCT) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means49.0   % 48.2   %
Median of the strain means49.2   % 48.8   %
SD of the strain means± 2.57 ± 3.56
Coefficient of variation (CV)0.0525 0.0739
Min–max range of strain means44.9   –   55.1   % 41.8   –   55.1   %
Mean sample size per strain7.8   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 72.9799 72.9799 11.456 0.0008
strain 29 2915.1446 100.5222 15.7794 < 0.0001
sex:strain 29 1283.4054 44.2554 6.9469 < 0.0001
Residuals 389 2478.115 6.3705


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 55.1 2.22   8 0.786 0.0404 52.5, 58.7 2.38
129S1/SvImJ m 52.0 2.2   7 0.832 0.0423 49.6, 55.3 1.07
A/J f 46.2 0.992   7 0.375 0.0215 45.0, 47.6 -1.08
A/J m 45.4 1.92   6 0.786 0.0424 43.5, 49.0 -0.78
BALB/cByJ f 50.3 1.21   7 0.458 0.0241 48.6, 52.0 0.51
BALB/cByJ m 48.0 2.16   7 0.816 0.045 43.5, 50.0 -0.05
BTBR T+ Itpr3tf/J f 45.9 0.81   8 0.286 0.0176 45.0, 46.9 -1.2
BTBR T+ Itpr3tf/J m 44.3 2.88   8 1.02 0.0651 38.0, 47.5 -1.09
BUB/BnJ f 46.9 1.81   7 0.683 0.0385 44.4, 49.8 -0.81
BUB/BnJ m 49.3 4.06   5 1.82 0.0823 45.6, 53.9 0.31
C3H/HeJ f 44.9 0.518   8 0.183 0.0115 44.3, 45.8 -1.59
C3H/HeJ m 42.3 7.15   8 2.53 0.169 29.2, 46.9 -1.65
C57BL/10J f 49.2 1.27   9 0.425 0.0259 47.5, 51.5 0.08
C57BL/10J m 50.5 1.49   8 0.527 0.0295 47.8, 52.7 0.65
C57BL/6J f 49.7 2.43   7 0.917 0.0488 46.2, 53.0 0.28
C57BL/6J m 50.5 2.76   6 1.13 0.0548 47.5, 54.6 0.65
C57BLKS/J f 50.1 2.57   8 0.908 0.0512 46.0, 52.6 0.43
C57BLKS/J m 47.3 2.09   8 0.739 0.0442 44.8, 50.4 -0.25
C57BR/cdJ f 50.4 1.97   8 0.697 0.0391 47.4, 53.9 0.55
C57BR/cdJ m 53.3 2.39   8 0.847 0.0449 50.1, 58.1 1.44
C57L/J f 52.8 2.42   8 0.855 0.0458 47.8, 54.9 1.48
C57L/J m 55.1 2.18   8 0.769 0.0395 51.0, 58.0 1.94
CAST/EiJ f 48.9 2.25   8 0.794 0.0459 46.4, 53.4 -0.03
CAST/EiJ m 52.5 1.74   6 0.711 0.0332 50.8, 54.7 1.21
CBA/J f 47.2 0.91   8 0.322 0.0193 45.5, 48.2 -0.69
CBA/J m 43.6 3.48   6 1.42 0.0798 37.0, 46.2 -1.29
DBA/2J f 49.1 2.82   8 0.996 0.0573 43.6, 52.3 0.04
DBA/2J m 44.8 3.52   7 1.33 0.0785 37.6, 48.3 -0.95
FVB/NJ f 46.5 1.88   8 0.666 0.0405 44.9, 50.2 -0.97
FVB/NJ m 43.9 2.14   8 0.755 0.0487 41.1, 47.5 -1.2
KK/HlJ f 48.0 1.58   7 0.597 0.0329 45.9, 51.0 -0.38
KK/HlJ m 45.7 1.73   11 0.523 0.0379 43.5, 49.1 -0.7
LP/J f 49.5 2.1   8 0.741 0.0423 45.8, 52.5 0.2
LP/J m 51.4 1.94   7 0.732 0.0377 49.7, 54.6 0.9
MRL/MpJ f 47.4 3.48   8 1.23 0.0733 40.8, 52.4 -0.62
MRL/MpJ m 50.5 1.25   8 0.441 0.0247 48.6, 52.2 0.65
NOD.B10Sn-H2b/J f 46.8 1.63   8 0.576 0.0348 44.3, 48.6 -0.85
NOD.B10Sn-H2b/J m 48.8 1.03   8 0.364 0.0211 47.5, 50.7 0.17
NON/ShiLtJ f 46.4 3.45   9 1.15 0.0742 42.7, 53.7 -1.01
NON/ShiLtJ m 51.9 1.86   7 0.705 0.0359 49.3, 54.9 1.04
NZO/HlLtJ f 52.8 1.75   5 0.783 0.0331 50.5, 54.8 1.48
NZO/HlLtJ m 44.6 7.51   5 3.36 0.168 37.8, 53.8 -1.01
NZW/LacJ f 45.2 0.849   8 0.3 0.0188 44.2, 46.4 -1.47
NZW/LacJ m 41.8 1.87   8 0.663 0.0448 39.3, 45.7 -1.79
P/J f 51.7 1.59   7 0.6 0.0307 48.8, 54.0 1.06
P/J m 48.9 1.85   3 1.07 0.0378 46.8, 50.1 0.2
PL/J f 52.9 1.98   7 0.75 0.0375 50.0, 55.6 1.52
PL/J m 44.9 4.09   9 1.36 0.0912 37.6, 50.0 -0.92
PWD/PhJ f 51.6 1.24   8 0.437 0.024 50.1, 53.3 1.02
PWD/PhJ m 49.0 1.6   8 0.565 0.0326 46.8, 50.4 0.23
RIIIS/J f 47.7 1.13   8 0.398 0.0236 46.3, 48.9 -0.5
RIIIS/J m 51.4 1.28   7 0.484 0.025 49.5, 53.0 0.9
SJL/J f 49.9 1.58   7 0.597 0.0316 47.9, 52.1 0.36
SJL/J m 45.2 3.71   8 1.31 0.0821 41.0, 52.5 -0.84
SM/J f 49.5 1.73   8 0.611 0.035 47.4, 51.8 0.2
SM/J m 46.8 1.66   8 0.587 0.0354 44.8, 49.3 -0.39
SWR/J f 50.7 5.04   7 1.9 0.0994 44.3, 56.4 0.67
SWR/J m 51.8 1.94   7 0.732 0.0374 48.1, 54.2 1.02
WSB/EiJ f 46.3 1.59   9 0.528 0.0343 44.2, 48.7 -1.04
WSB/EiJ m 50.0 2.56   8 0.904 0.0511 45.7, 53.0 0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 55.05 0.8924 56.8045 53.2955
129S1/SvImJ m 52.0 0.954 53.8756 50.1244
A/J f 46.1857 0.954 48.0613 44.3101
A/J m 45.4333 1.0304 47.4592 43.4075
BALB/cByJ f 50.3143 0.954 52.1899 48.4387
BALB/cByJ m 48.0286 0.954 49.9042 46.153
BTBR T+ Itpr3tf/J f 45.9125 0.8924 47.667 44.158
BTBR T+ Itpr3tf/J m 44.2625 0.8924 46.017 42.508
BUB/BnJ f 46.9286 0.954 48.8042 45.053
BUB/BnJ m 49.3 1.1288 51.5192 47.0808
C3H/HeJ f 44.9 0.8924 46.6545 43.1455
C3H/HeJ m 42.2875 0.8924 44.042 40.533
C57BL/10J f 49.2 0.8413 50.8541 47.5459
C57BL/10J m 50.4875 0.8924 52.242 48.733
C57BL/6J f 49.7 0.954 51.5756 47.8244
C57BL/6J m 50.45 1.0304 52.4759 48.4241
C57BLKS/J f 50.125 0.8924 51.8795 48.3705
C57BLKS/J m 47.2625 0.8924 49.017 45.508
C57BR/cdJ f 50.3875 0.8924 52.142 48.633
C57BR/cdJ m 53.3 0.8924 55.0545 51.5455
C57L/J f 52.8125 0.8924 54.567 51.058
C57L/J m 55.075 0.8924 56.8295 53.3205
CAST/EiJ f 48.9125 0.8924 50.667 47.158
CAST/EiJ m 52.45 1.0304 54.4759 50.4241
CBA/J f 47.1625 0.8924 48.917 45.408
CBA/J m 43.6 1.0304 45.6259 41.5741
DBA/2J f 49.125 0.8924 50.8795 47.3705
DBA/2J m 44.7571 0.954 46.6327 42.8816
FVB/NJ f 46.4875 0.8924 48.242 44.733
FVB/NJ m 43.875 0.8924 45.6295 42.1205
KK/HlJ f 47.9857 0.954 49.8613 46.1101
KK/HlJ m 45.6818 0.761 47.178 44.1856
LP/J f 49.5 0.8924 51.2545 47.7455
LP/J m 51.3714 0.954 53.247 49.4958
MRL/MpJ f 47.4375 0.8924 49.192 45.683
MRL/MpJ m 50.4875 0.8924 52.242 48.733
NOD.B10Sn-H2b/J f 46.75 0.8924 48.5045 44.9955
NOD.B10Sn-H2b/J m 48.775 0.8924 50.5295 47.0205
NON/ShiLtJ f 46.4222 0.8413 48.0763 44.7681
NON/ShiLtJ m 51.9286 0.954 53.8042 50.053
NZO/HlLtJ f 52.84 1.1288 55.0592 50.6208
NZO/HlLtJ m 44.58 1.1288 46.7992 42.3608
NZW/LacJ f 45.2125 0.8924 46.967 43.458
NZW/LacJ m 41.8125 0.8924 43.567 40.058
P/J f 51.6714 0.954 53.547 49.7958
P/J m 48.9333 1.4572 51.7983 46.0683
PL/J f 52.9143 0.954 54.7899 51.0387
PL/J m 44.8667 0.8413 46.5208 43.2126
PWD/PhJ f 51.55 0.8924 53.3045 49.7955
PWD/PhJ m 48.9625 0.8924 50.717 47.208
RIIIS/J f 47.7125 0.8924 49.467 45.958
RIIIS/J m 51.3571 0.954 53.2327 49.4816
SJL/J f 49.9143 0.954 51.7899 48.0387
SJL/J m 45.175 0.8924 46.9295 43.4205
SM/J f 49.475 0.8924 51.2295 47.7205
SM/J m 46.8375 0.8924 48.592 45.083
SWR/J f 50.6714 0.954 52.547 48.7958
SWR/J m 51.7714 0.954 53.647 49.8958
WSB/EiJ f 46.2556 0.8413 47.9097 44.6014
WSB/EiJ m 50.05 0.8924 51.8045 48.2955


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 53.525 0.6531 54.8091 52.2409
A/J both 45.8095 0.7021 47.1899 44.4291
BALB/cByJ both 49.1714 0.6746 50.4977 47.8452
BTBR T+ Itpr3tf/J both 45.0875 0.631 46.3281 43.8469
BUB/BnJ both 48.1143 0.7389 49.5671 46.6615
C3H/HeJ both 43.5938 0.631 44.8343 42.3532
C57BL/10J both 49.8438 0.6132 51.0494 48.6381
C57BL/6J both 50.075 0.7021 51.4554 48.6946
C57BLKS/J both 48.6938 0.631 49.9343 47.4532
C57BR/cdJ both 51.8438 0.631 53.0843 50.6032
C57L/J both 53.9438 0.631 55.1843 52.7032
CAST/EiJ both 50.6813 0.6816 52.0212 49.3413
CBA/J both 45.3813 0.6816 46.7212 44.0413
DBA/2J both 46.9411 0.6531 48.2252 45.6569
FVB/NJ both 45.1813 0.631 46.4218 43.9407
KK/HlJ both 46.8338 0.6102 48.0334 45.6341
LP/J both 50.4357 0.6531 51.7198 49.1516
MRL/MpJ both 48.9625 0.631 50.2031 47.7219
NOD.B10Sn-H2b/J both 47.7625 0.631 49.0031 46.5219
NON/ShiLtJ both 49.1754 0.636 50.4258 47.925
NZO/HlLtJ both 48.71 0.7982 50.2792 47.1408
NZW/LacJ both 43.5125 0.631 44.7531 42.2719
P/J both 50.3024 0.8709 52.0146 48.5902
PL/J both 48.8905 0.636 50.1409 47.6401
PWD/PhJ both 50.2563 0.631 51.4968 49.0157
RIIIS/J both 49.5348 0.6531 50.819 48.2507
SJL/J both 47.5446 0.6531 48.8288 46.2605
SM/J both 48.1563 0.631 49.3968 46.9157
SWR/J both 51.2214 0.6746 52.5477 49.8952
WSB/EiJ both 48.1528 0.6132 49.3584 46.9471




  GWAS USING LINEAR MIXED MODELS