Project measure / variable:   Peters4   LUC_M18

ID, description, units MPD:24331   LUC_M18   large unstained cells count (LUC; units per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - large unstained cells count (LUC; units per volume x 103) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means0.0846   n/µL 0.0822   n/µL
Median of the strain means0.0533   n/µL 0.0800   n/µL
SD of the strain means± 0.0773 ± 0.0600
Coefficient of variation (CV)0.914 0.729
Min–max range of strain means0.0214   –   0.310   n/µL 0.0143   –   0.305   n/µL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0081 0.0081 1.1166 0.2914
strain 26 1.1897 0.0458 6.2945 < 0.0001
sex:strain 26 0.6126 0.0236 3.2411 < 0.0001
Residuals 334 2.4281 0.0073


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0513 0.0482   8 0.0171 0.941 0.01, 0.16 -0.43
129S1/SvImJ m 0.0143 0.0127   7 0.00481 0.891 -1.13
A/J f 0.0286 0.0212   7 0.008 0.74 0.01, 0.07 -0.72
A/J m 0.034 0.0241   15 0.00623 0.71 0.01, 0.1 -0.8
BALB/cByJ f 0.0363 0.0245   8 0.00865 0.675 0.01, 0.08 -0.62
BALB/cByJ m 0.107 0.086   7 0.0325 0.802 0.02, 0.26 0.41
BTBR T+ Itpr3tf/J f 0.075 0.0245   8 0.00866 0.327 0.04, 0.11 -0.12
BTBR T+ Itpr3tf/J m 0.305 0.288   6 0.118 0.945 0.13, 0.89 3.71
BUB/BnJ f 0.134 0.0702   5 0.0314 0.524 0.06, 0.21 0.64
BUB/BnJ m 0.128 0.0574   6 0.0234 0.447 0.09, 0.24 0.76
C3H/HeJ f 0.0214 0.0157   7 0.00595 0.734 -0.82
C3H/HeJ m 0.0338 0.00916   8 0.00324 0.271 0.02, 0.05 -0.81
C57BL/10J f 0.16 0.131   7 0.0495 0.818 0.04, 0.35 0.97
C57BL/10J m 0.108 0.06   13 0.0166 0.557 0.05, 0.25 0.43
C57BL/6J f 0.114 0.0435   7 0.0165 0.381 0.04, 0.17 0.38
C57BL/6J m 0.191 0.0882   7 0.0333 0.461 0.09, 0.32 1.81
C57BLKS/J m 0.0944 0.0371   16 0.00926 0.393 0.03, 0.15 0.2
C57BR/cdJ f 0.0537 0.0316   8 0.0112 0.588 0.02, 0.11 -0.4
C57BR/cdJ m 0.09 0.0421   8 0.0149 0.468 0.02, 0.15 0.13
C57L/J f 0.0986 0.057   7 0.0215 0.578 0.04, 0.2 0.18
C57L/J m 0.12 0.0726   7 0.0274 0.605 0.05, 0.27 0.63
CAST/EiJ f 0.0887 0.0376   8 0.0133 0.423 0.02, 0.15 0.05
CBA/J f 0.025 0.00707   2   0.005 0.283 0.02, 0.03 -0.77
CBA/J m 0.084 0.0994   5 0.0445 1.18 0.02, 0.26 0.03
DBA/2J f 0.0733 0.055   6 0.0225 0.75 0.02, 0.16 -0.15
DBA/2J m 0.055 0.0164   6 0.00671 0.299 0.04, 0.08 -0.45
FVB/NJ f 0.0286 0.009   7 0.0034 0.315 0.01, 0.04 -0.72
FVB/NJ m 0.0317 0.0395   12 0.0114 1.25 -0.84
KK/HlJ f 0.108 0.0697   6 0.0285 0.643 0.03, 0.21 0.3
KK/HlJ m 0.109 0.113   7 0.0426 1.04 0.04, 0.35 0.45
LP/J m 0.09 0.0193   8 0.00681 0.214 0.06, 0.11 0.13
MRL/MpJ f 0.284 0.223   7 0.0842 0.783 0.04, 0.67 2.58
MRL/MpJ m 0.122 0.052   8 0.0184 0.425 0.04, 0.19 0.66
NOD.B10Sn-H2b/J f 0.229 0.174   7 0.0658 0.762 0.06, 0.53 1.87
NOD.B10Sn-H2b/J m 0.0357 0.0341   7 0.0129 0.954 0.01, 0.11 -0.78
NON/ShiLtJ f 0.028 0.00837   5 0.00374 0.299 0.02, 0.04 -0.73
NON/ShiLtJ m 0.08 0.152   7 0.0573 1.89 -0.04
NZO/HlLtJ f 0.099 0.138   10 0.0437 1.4 0.02, 0.48 0.19
NZO/HlLtJ m 0.08 0.0424   2   0.03 0.53 0.05, 0.11 -0.04
NZW/LacJ f 0.31 0.29   7 0.11 0.935 0.03, 0.84 2.91
NZW/LacJ m 0.127 0.0308   6 0.0126 0.243 0.09, 0.16 0.75
P/J f 0.0257 0.0237   7 0.00896 0.922 0.01, 0.06 -0.76
P/J m 0.086 0.0336   5 0.015 0.391 0.05, 0.12 0.06
PL/J f 0.0525 0.0506   8 0.0179 0.965 0.01, 0.17 -0.42
PL/J m 0.0275 0.0167   8 0.0059 0.607 0.01, 0.05 -0.91
PWD/PhJ f 0.0217 0.0117   6 0.00477 0.54 0.01, 0.04 -0.81
PWD/PhJ m 0.0257 0.00787   7 0.00297 0.306 0.02, 0.04 -0.94
RIIIS/J f 0.03 0.012   8 0.00423 0.398 0.01, 0.05 -0.71
RIIIS/J m 0.0363 0.00916   8 0.00324 0.253 0.02, 0.05 -0.77
SJL/J f 0.0529 0.0718   7 0.0271 1.36 -0.41
SJL/J m 0.0575 0.066   4 0.033 1.15 0.01, 0.15 -0.41
SM/J f 0.025 0.0105   6 0.00428 0.42 0.01, 0.04 -0.77
SM/J m 0.0367 0.0166   9 0.00553 0.452 0.02, 0.07 -0.76
SWR/J f 0.08 0.0673   7 0.0254 0.842 0.02, 0.22 -0.06
SWR/J m 0.0488 0.0383   8 0.0136 0.786 -0.56
WSB/EiJ f 0.035 0.0141   8 0.005 0.404 0.02, 0.06 -0.64
WSB/EiJ m 0.0267 0.015   9 0.005 0.562 0.01, 0.05 -0.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0513 0.0301 0.1105 0.0
129S1/SvImJ m 0.0143 0.0322 0.0777 0.0
A/J f 0.0286 0.0322 0.092 0.0
A/J m 0.034 0.022 0.0773 0.0
BALB/cByJ f 0.0363 0.0301 0.0955 0.0
BALB/cByJ m 0.1071 0.0322 0.1705 0.0438
BTBR T+ Itpr3tf/J f 0.075 0.0301 0.1343 0.0157
BTBR T+ Itpr3tf/J m 0.305 0.0348 0.3735 0.2365
BUB/BnJ f 0.134 0.0381 0.209 0.059
BUB/BnJ m 0.1283 0.0348 0.1968 0.0599
C3H/HeJ f 0.0214 0.0322 0.0848 0.0
C3H/HeJ m 0.0337 0.0301 0.093 0.0
C57BL/10J f 0.16 0.0322 0.2234 0.0966
C57BL/10J m 0.1077 0.0236 0.1542 0.0612
C57BL/6J f 0.1143 0.0322 0.1777 0.0509
C57BL/6J m 0.1914 0.0322 0.2548 0.128
C57BR/cdJ f 0.0538 0.0301 0.113 0.0
C57BR/cdJ m 0.09 0.0301 0.1493 0.0307
C57L/J f 0.0986 0.0322 0.162 0.0352
C57L/J m 0.12 0.0322 0.1834 0.0566
CBA/J f 0.025 0.0603 0.1436 0.0
CBA/J m 0.084 0.0381 0.159 0.009
DBA/2J f 0.0733 0.0348 0.1418 0.0049
DBA/2J m 0.055 0.0348 0.1235 0.0
FVB/NJ f 0.0286 0.0322 0.092 0.0
FVB/NJ m 0.0317 0.0246 0.0801 0.0
KK/HlJ f 0.1083 0.0348 0.1768 0.0399
KK/HlJ m 0.1086 0.0322 0.172 0.0452
MRL/MpJ f 0.2843 0.0322 0.3477 0.2209
MRL/MpJ m 0.1225 0.0301 0.1818 0.0632
NOD.B10Sn-H2b/J f 0.2286 0.0322 0.292 0.1652
NOD.B10Sn-H2b/J m 0.0357 0.0322 0.0991 0.0
NON/ShiLtJ f 0.028 0.0381 0.103 0.0
NON/ShiLtJ m 0.08 0.0322 0.1434 0.0166
NZO/HlLtJ f 0.099 0.027 0.152 0.046
NZO/HlLtJ m 0.08 0.0603 0.1986 0.0
NZW/LacJ f 0.31 0.0322 0.3734 0.2466
NZW/LacJ m 0.1267 0.0348 0.1951 0.0582
P/J f 0.0257 0.0322 0.0891 0.0
P/J m 0.086 0.0381 0.161 0.011
PL/J f 0.0525 0.0301 0.1118 0.0
PL/J m 0.0275 0.0301 0.0868 0.0
PWD/PhJ f 0.0217 0.0348 0.0901 0.0
PWD/PhJ m 0.0257 0.0322 0.0891 0.0
RIIIS/J f 0.03 0.0301 0.0893 0.0
RIIIS/J m 0.0363 0.0301 0.0955 0.0
SJL/J f 0.0529 0.0322 0.1162 0.0
SJL/J m 0.0575 0.0426 0.1414 0.0
SM/J f 0.025 0.0348 0.0935 0.0
SM/J m 0.0367 0.0284 0.0926 0.0
SWR/J f 0.08 0.0322 0.1434 0.0166
SWR/J m 0.0487 0.0301 0.108 0.0
WSB/EiJ f 0.035 0.0301 0.0943 0.0
WSB/EiJ m 0.0267 0.0284 0.0826 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0328 0.0221 0.0762 0.0
A/J both 0.0313 0.0195 0.0697 0.0
BALB/cByJ both 0.0717 0.0221 0.1151 0.0283
BTBR T+ Itpr3tf/J both 0.19 0.023 0.2353 0.1447
BUB/BnJ both 0.1312 0.0258 0.1819 0.0804
C3H/HeJ both 0.0276 0.0221 0.071 0.0
C57BL/10J both 0.1338 0.02 0.1732 0.0945
C57BL/6J both 0.1529 0.0228 0.1977 0.108
C57BR/cdJ both 0.0719 0.0213 0.1138 0.0299
C57L/J both 0.1093 0.0228 0.1541 0.0645
CBA/J both 0.0545 0.0357 0.1247 0.0
DBA/2J both 0.0642 0.0246 0.1126 0.0158
FVB/NJ both 0.0301 0.0203 0.07 0.0
KK/HlJ both 0.1085 0.0237 0.1551 0.0618
MRL/MpJ both 0.2034 0.0221 0.2468 0.16
NOD.B10Sn-H2b/J both 0.1321 0.0228 0.177 0.0873
NON/ShiLtJ both 0.054 0.025 0.1031 0.0049
NZO/HlLtJ both 0.0895 0.033 0.1545 0.0245
NZW/LacJ both 0.2183 0.0237 0.265 0.1717
P/J both 0.0559 0.025 0.105 0.0068
PL/J both 0.04 0.0213 0.0819 0.0
PWD/PhJ both 0.0237 0.0237 0.0703 0.0
RIIIS/J both 0.0331 0.0213 0.0751 0.0
SJL/J both 0.0552 0.0267 0.1077 0.0026
SM/J both 0.0308 0.0225 0.075 0.0
SWR/J both 0.0644 0.0221 0.1078 0.021
WSB/EiJ both 0.0308 0.0207 0.0716 0.0




  GWAS USING LINEAR MIXED MODELS