Project measure / variable:   Peters4   BASO_M24

ID, description, units MPD:24328   BASO_M24   basophil count (BASO; units per volume x 103)   [n/µL]  at age 24mo  
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - basophil count (BASO; units per volume x 103) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means0.0625   n/µL 0.0472   n/µL
Median of the strain means0.0433   n/µL 0.0416   n/µL
SD of the strain means± 0.0478 ± 0.0249
Coefficient of variation (CV)0.764 0.528
Min–max range of strain means0.0200   –   0.152   n/µL 0.0200   –   0.120   n/µL
Mean sample size per strain6.6   mice 6.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0153 0.0153 4.836 0.0298
strain 9 0.1382 0.0154 4.8658 < 0.0001
sex:strain 9 0.0344 0.0038 1.2125 0.2938
Residuals 118 0.3724 0.0032


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0387 0.0146   8 0.00515 0.376 0.01, 0.05 -0.5
129S1/SvImJ m 0.0383 0.0185   12 0.00534 0.483 0.02, 0.09 -0.36
A/J m 0.04 0.0141   2   0.01 0.354 0.03, 0.05 -0.29
BALB/cByJ f 0.02 0.00707   5 0.00316 0.354 0.01, 0.03 -0.89
C57BL/10J f 0.0414 0.0324   7 0.0122 0.781 0.01, 0.1 -0.44
C57BL/10J m 0.04 0.016   8 0.00567 0.401 0.02, 0.07 -0.29
C57BL/6J f 0.0433 0.0288   6 0.0117 0.664 0.01, 0.09 -0.4
C57BL/6J m 0.0414 0.0121   7 0.00459 0.293 0.02, 0.06 -0.23
C57BLKS/J f 0.0783 0.0264   6 0.0108 0.337 0.03, 0.11 0.33
C57BLKS/J m 0.0429 0.0229   7 0.00865 0.534 0.02, 0.09 -0.17
C57BR/cdJ f 0.0814 0.0511   7 0.0193 0.628 0.03, 0.16 0.39
C57BR/cdJ m 0.0567 0.0356   6 0.0145 0.628 0.02, 0.12 0.38
LP/J f 0.147 0.0844   7 0.0319 0.574 0.05, 0.29 1.77
LP/J m 0.12 0.0548   5 0.0245 0.456 0.07, 0.21 2.92
NON/ShiLtJ f 0.02 0.00816   7 0.00309 0.408 0.01, 0.03 -0.89
NON/ShiLtJ m 0.0267 0.0273   6 0.0112 1.02 0.01, 0.08 -0.82
NZW/LacJ f 0.152 0.228   6 0.093 1.5 0.02, 0.61 1.87
NZW/LacJ m 0.0417 0.0133   6 0.00543 0.319 0.02, 0.05 -0.22
PWD/PhJ f 0.02 0.00632   6 0.00258 0.316 0.01, 0.03 -0.89
PWD/PhJ m 0.02 0.00577   7 0.00218 0.289 0.01, 0.03 -1.09
SM/J m 0.0514 0.0389   7 0.0147 0.757 0.01, 0.11 0.17
WSB/EiJ f 0.0457 0.0113   7 0.00429 0.248 0.03, 0.06 -0.35
WSB/EiJ m 0.0471 0.0287   7 0.0108 0.609 0.02, 0.1 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0388 0.0199 0.0781 0.0
129S1/SvImJ m 0.0383 0.0162 0.0704 0.0062
C57BL/10J f 0.0414 0.0212 0.0835 0.0
C57BL/10J m 0.04 0.0199 0.0793 0.0007
C57BL/6J f 0.0433 0.0229 0.0887 0.0
C57BL/6J m 0.0414 0.0212 0.0835 0.0
C57BLKS/J f 0.0783 0.0229 0.1237 0.0329
C57BLKS/J m 0.0429 0.0212 0.0849 0.0008
C57BR/cdJ f 0.0814 0.0212 0.1235 0.0394
C57BR/cdJ m 0.0567 0.0229 0.1021 0.0113
LP/J f 0.1471 0.0212 0.1892 0.1051
LP/J m 0.12 0.0251 0.1697 0.0703
NON/ShiLtJ f 0.02 0.0212 0.062 0.0
NON/ShiLtJ m 0.0267 0.0229 0.0721 0.0
NZW/LacJ f 0.1517 0.0229 0.1971 0.1063
NZW/LacJ m 0.0417 0.0229 0.0871 0.0
PWD/PhJ f 0.02 0.0229 0.0654 0.0
PWD/PhJ m 0.02 0.0212 0.062 0.0
WSB/EiJ f 0.0457 0.0212 0.0878 0.0037
WSB/EiJ m 0.0471 0.0212 0.0892 0.0051


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0385 0.0128 0.0639 0.0132
C57BL/10J both 0.0407 0.0145 0.0695 0.0119
C57BL/6J both 0.0424 0.0156 0.0733 0.0114
C57BLKS/J both 0.0606 0.0156 0.0915 0.0297
C57BR/cdJ both 0.069 0.0156 0.1 0.0381
LP/J both 0.1336 0.0164 0.1661 0.101
NON/ShiLtJ both 0.0233 0.0156 0.0543 0.0
NZW/LacJ both 0.0967 0.0162 0.1288 0.0646
PWD/PhJ both 0.02 0.0156 0.0509 0.0
WSB/EiJ both 0.0464 0.015 0.0762 0.0167




  GWAS USING LINEAR MIXED MODELS