Project measure / variable:   Peters4   BASO_M18

ID, description, units MPD:24327   BASO_M18   basophil count (BASO; units per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Peters4 - basophil count (BASO; units per volume x 103) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means0.0337   n/µL 0.0320   n/µL
Median of the strain means0.0278   n/µL 0.0280   n/µL
SD of the strain means± 0.0180 ± 0.0165
Coefficient of variation (CV)0.535 0.517
Min–max range of strain means0.0125   –   0.0850   n/µL 0.00750   –   0.0662   n/µL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0013 0.0013 1.6894 0.1946
strain 26 0.0936 0.0036 4.7042 < 0.0001
sex:strain 26 0.0267 0.001 1.339 0.1279
Residuals 334 0.2557 0.0008


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0288 0.0181   8 0.00639 0.629 -0.27
129S1/SvImJ m 0.0214 0.009   7 0.0034 0.42 0.01, 0.03 -0.64
A/J f 0.0286 0.0107   7 0.00404 0.374 0.02, 0.05 -0.28
A/J m 0.026 0.0135   15 0.00349 0.52 -0.36
BALB/cByJ f 0.0462 0.0256   8 0.00905 0.554 0.02, 0.09 0.69
BALB/cByJ m 0.0271 0.0125   7 0.00474 0.462 0.01, 0.05 -0.3
BTBR T+ Itpr3tf/J f 0.0188 0.00641   8 0.00227 0.342 0.01, 0.03 -0.83
BTBR T+ Itpr3tf/J m 0.0333 0.0137   6 0.00558 0.41 0.01, 0.05 0.08
BUB/BnJ f 0.05 0.0255   5 0.0114 0.51 0.02, 0.08 0.91
BUB/BnJ m 0.0533 0.0273   6 0.0112 0.512 0.01, 0.08 1.29
C3H/HeJ f 0.02 0.0115   7 0.00436 0.577 0.01, 0.04 -0.76
C3H/HeJ m 0.0187 0.00991   8 0.0035 0.529 0.01, 0.03 -0.8
C57BL/10J f 0.0686 0.0701   7 0.0265 1.02 0.03, 0.22 1.94
C57BL/10J m 0.0662 0.0437   13 0.0121 0.66 0.02, 0.19 2.07
C57BL/6J f 0.0329 0.016   7 0.00606 0.488 0.01, 0.05 -0.04
C57BL/6J m 0.0543 0.0305   7 0.0115 0.561 0.03, 0.12 1.35
C57BLKS/J m 0.0431 0.012   16 0.00299 0.277 0.03, 0.07 0.67
C57BR/cdJ f 0.0425 0.0183   8 0.00648 0.431 0.01, 0.07 0.49
C57BR/cdJ m 0.0613 0.021   8 0.00743 0.343 0.03, 0.1 1.77
C57L/J f 0.0271 0.00951   7 0.0036 0.35 0.01, 0.04 -0.37
C57L/J m 0.0529 0.0236   7 0.00892 0.447 0.02, 0.08 1.27
CAST/EiJ f 0.0287 0.00641   8 0.00227 0.223 0.02, 0.04 -0.28
CBA/J f 0.02 0.0   2   0.0 0.0 0.02, 0.02 -0.76
CBA/J m 0.008 0.00837   5 0.00374 1.05 -1.45
DBA/2J f 0.03 0.0179   6 0.0073 0.596 0.01, 0.06 -0.2
DBA/2J m 0.04 0.0126   6 0.00516 0.316 0.03, 0.06 0.48
FVB/NJ f 0.0229 0.0111   7 0.00421 0.487 0.01, 0.04 -0.6
FVB/NJ m 0.0133 0.00651   12 0.00188 0.489 -1.13
KK/HlJ f 0.0217 0.00753   6 0.00307 0.347 0.01, 0.03 -0.66
KK/HlJ m 0.0357 0.023   7 0.00869 0.644 0.01, 0.08 0.22
LP/J m 0.0638 0.00916   8 0.00324 0.144 0.05, 0.08 1.92
MRL/MpJ f 0.0229 0.0221   7 0.00837 0.969 0.01, 0.07 -0.6
MRL/MpJ m 0.0312 0.0173   8 0.00611 0.553 0.01, 0.06 -0.05
NOD.B10Sn-H2b/J f 0.0586 0.0302   7 0.0114 0.516 0.02, 0.1 1.38
NOD.B10Sn-H2b/J m 0.04 0.00816   7 0.00309 0.204 0.03, 0.05 0.48
NON/ShiLtJ f 0.034 0.0152   5 0.00678 0.446 0.02, 0.06 0.02
NON/ShiLtJ m 0.0143 0.0113   7 0.00429 0.794 -1.07
NZO/HlLtJ f 0.085 0.0918   10 0.029 1.08 0.01, 0.29 2.85
NZO/HlLtJ m 0.03 0.0   2   0.0 0.0 0.03, 0.03 -0.12
NZW/LacJ f 0.07 0.0894   7 0.0338 1.28 0.01, 0.27 2.01
NZW/LacJ m 0.0233 0.00816   6 0.00333 0.35 0.01, 0.03 -0.53
P/J f 0.0229 0.018   7 0.0068 0.787 0.01, 0.06 -0.6
P/J m 0.028 0.00447   5 0.002 0.16 0.02, 0.03 -0.24
PL/J f 0.0238 0.0141   8 0.00498 0.593 -0.55
PL/J m 0.0213 0.0295   8 0.0104 1.39 -0.65
PWD/PhJ f 0.0167 0.00516   6 0.00211 0.31 0.01, 0.02 -0.94
PWD/PhJ m 0.0143 0.00535   7 0.00202 0.374 0.01, 0.02 -1.07
RIIIS/J f 0.0125 0.00707   8 0.0025 0.566 -1.18
RIIIS/J m 0.0225 0.00707   8 0.0025 0.314 0.01, 0.03 -0.57
SJL/J f 0.0257 0.0264   7 0.00997 1.03 0.01, 0.08 -0.44
SJL/J m 0.0075 0.00957   4 0.00479 1.28 -1.48
SM/J f 0.0217 0.0147   6 0.00601 0.679 0.01, 0.05 -0.66
SM/J m 0.0244 0.0124   9 0.00412 0.506 0.01, 0.05 -0.46
SWR/J f 0.0414 0.0219   7 0.00829 0.529 0.01, 0.08 0.43
SWR/J m 0.0225 0.00707   8 0.0025 0.314 0.01, 0.03 -0.57
WSB/EiJ f 0.0212 0.00641   8 0.00227 0.302 0.01, 0.03 -0.69
WSB/EiJ m 0.03 0.0132   9 0.00441 0.441 0.02, 0.06 -0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0288 0.0098 0.048 0.0095
129S1/SvImJ m 0.0214 0.0105 0.042 0.0009
A/J f 0.0286 0.0105 0.0491 0.008
A/J m 0.026 0.0071 0.0401 0.0119
BALB/cByJ f 0.0462 0.0098 0.0655 0.027
BALB/cByJ m 0.0271 0.0105 0.0477 0.0066
BTBR T+ Itpr3tf/J f 0.0188 0.0098 0.038 0.0
BTBR T+ Itpr3tf/J m 0.0333 0.0113 0.0556 0.0111
BUB/BnJ f 0.05 0.0124 0.0743 0.0257
BUB/BnJ m 0.0533 0.0113 0.0756 0.0311
C3H/HeJ f 0.02 0.0105 0.0406 0.0
C3H/HeJ m 0.0188 0.0098 0.038 0.0
C57BL/10J f 0.0686 0.0105 0.0891 0.048
C57BL/10J m 0.0662 0.0077 0.0813 0.0511
C57BL/6J f 0.0329 0.0105 0.0534 0.0123
C57BL/6J m 0.0543 0.0105 0.0749 0.0337
C57BR/cdJ f 0.0425 0.0098 0.0617 0.0233
C57BR/cdJ m 0.0613 0.0098 0.0805 0.042
C57L/J f 0.0271 0.0105 0.0477 0.0066
C57L/J m 0.0529 0.0105 0.0734 0.0323
CBA/J f 0.02 0.0196 0.0585 0.0
CBA/J m 0.008 0.0124 0.0323 0.0
DBA/2J f 0.03 0.0113 0.0522 0.0078
DBA/2J m 0.04 0.0113 0.0622 0.0178
FVB/NJ f 0.0229 0.0105 0.0434 0.0023
FVB/NJ m 0.0133 0.008 0.029 0.0
KK/HlJ f 0.0217 0.0113 0.0439 0.0
KK/HlJ m 0.0357 0.0105 0.0563 0.0151
MRL/MpJ f 0.0229 0.0105 0.0434 0.0023
MRL/MpJ m 0.0313 0.0098 0.0505 0.012
NOD.B10Sn-H2b/J f 0.0586 0.0105 0.0791 0.038
NOD.B10Sn-H2b/J m 0.04 0.0105 0.0606 0.0194
NON/ShiLtJ f 0.034 0.0124 0.0583 0.0097
NON/ShiLtJ m 0.0143 0.0105 0.0349 0.0
NZO/HlLtJ f 0.085 0.0088 0.1022 0.0678
NZO/HlLtJ m 0.03 0.0196 0.0685 0.0
NZW/LacJ f 0.07 0.0105 0.0906 0.0494
NZW/LacJ m 0.0233 0.0113 0.0456 0.0011
P/J f 0.0229 0.0105 0.0434 0.0023
P/J m 0.028 0.0124 0.0523 0.0037
PL/J f 0.0238 0.0098 0.043 0.0045
PL/J m 0.0213 0.0098 0.0405 0.002
PWD/PhJ f 0.0167 0.0113 0.0389 0.0
PWD/PhJ m 0.0143 0.0105 0.0349 0.0
RIIIS/J f 0.0125 0.0098 0.0317 0.0
RIIIS/J m 0.0225 0.0098 0.0417 0.0033
SJL/J f 0.0257 0.0105 0.0463 0.0051
SJL/J m 0.0075 0.0138 0.0347 0.0
SM/J f 0.0217 0.0113 0.0439 0.0
SM/J m 0.0244 0.0092 0.0426 0.0063
SWR/J f 0.0414 0.0105 0.062 0.0209
SWR/J m 0.0225 0.0098 0.0417 0.0033
WSB/EiJ f 0.0213 0.0098 0.0405 0.002
WSB/EiJ m 0.03 0.0092 0.0481 0.0119


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0251 0.0072 0.0392 0.011
A/J both 0.0273 0.0063 0.0397 0.0148
BALB/cByJ both 0.0367 0.0072 0.0508 0.0226
BTBR T+ Itpr3tf/J both 0.026 0.0075 0.0407 0.0113
BUB/BnJ both 0.0517 0.0084 0.0681 0.0352
C3H/HeJ both 0.0194 0.0072 0.0335 0.0053
C57BL/10J both 0.0674 0.0065 0.0801 0.0546
C57BL/6J both 0.0436 0.0074 0.0581 0.029
C57BR/cdJ both 0.0519 0.0069 0.0655 0.0383
C57L/J both 0.04 0.0074 0.0545 0.0255
CBA/J both 0.014 0.0116 0.0368 0.0
DBA/2J both 0.035 0.008 0.0507 0.0193
FVB/NJ both 0.0181 0.0066 0.031 0.0052
KK/HlJ both 0.0287 0.0077 0.0438 0.0135
MRL/MpJ both 0.0271 0.0072 0.0411 0.013
NOD.B10Sn-H2b/J both 0.0493 0.0074 0.0638 0.0347
NON/ShiLtJ both 0.0241 0.0081 0.0401 0.0082
NZO/HlLtJ both 0.0575 0.0107 0.0786 0.0364
NZW/LacJ both 0.0467 0.0077 0.0618 0.0315
P/J both 0.0254 0.0081 0.0414 0.0095
PL/J both 0.0225 0.0069 0.0361 0.0089
PWD/PhJ both 0.0155 0.0077 0.0306 0.0003
RIIIS/J both 0.0175 0.0069 0.0311 0.0039
SJL/J both 0.0166 0.0087 0.0337 0.0
SM/J both 0.0231 0.0073 0.0374 0.0087
SWR/J both 0.032 0.0072 0.046 0.0179
WSB/EiJ both 0.0256 0.0067 0.0388 0.0124




  GWAS USING LINEAR MIXED MODELS