Project measure / variable:   Peters4   LYMPH_M12

ID, description, units MPD:24314   LYMPH_M12   lymphocyte count (LYM; units per volume x 103)   [n/µL]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - lymphocyte count (LYM; units per volume x 103) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means5.81   n/µL 6.26   n/µL
Median of the strain means4.79   n/µL 5.28   n/µL
SD of the strain means± 2.55 ± 2.62
Coefficient of variation (CV)0.439 0.419
Min–max range of strain means2.47   –   10.6   n/µL 2.70   –   11.4   n/µL
Mean sample size per strain7.8   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 20.574 20.574 6.9894 0.0085
strain 29 2622.8967 90.4447 30.7258 < 0.0001
sex:strain 29 310.3649 10.7022 3.6358 < 0.0001
Residuals 393 1156.8372 2.9436


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.73 0.968   8 0.342 0.205 2.97, 6.16 -0.42
129S1/SvImJ m 3.71 1.28   7 0.484 0.345 2.24, 5.59 -0.97
A/J f 4.03 1.35   7 0.509 0.334 2.46, 6.42 -0.7
A/J m 3.46 0.847   6 0.346 0.245 2.57, 4.76 -1.07
BALB/cByJ f 4.85 1.94   7 0.735 0.401 1.93, 7.54 -0.38
BALB/cByJ m 7.66 1.71   7 0.646 0.223 5.35, 10.2 0.53
BTBR T+ Itpr3tf/J f 8.04 0.853   8 0.302 0.106 6.57, 9.26 0.87
BTBR T+ Itpr3tf/J m 9.5 1.74   8 0.617 0.184 8.26, 13.1 1.24
BUB/BnJ f 9.7 2.48   7 0.937 0.256 5.02, 12.6 1.52
BUB/BnJ m 9.99 3.29   6 1.34 0.33 4.53, 14.4 1.42
C3H/HeJ f 4.0 0.905   8 0.32 0.226 2.87, 5.89 -0.71
C3H/HeJ m 4.92 0.823   8 0.291 0.167 3.81, 6.31 -0.51
C57BL/10J f 8.44 2.54   9 0.845 0.3 5.6, 13.9 1.03
C57BL/10J m 10.3 1.78   8 0.631 0.173 7.67, 12.8 1.54
C57BL/6J f 7.81 2.65   7 1.0 0.339 3.2, 10.6 0.78
C57BL/6J m 10.7 1.4   6 0.572 0.131 8.96, 12.6 1.69
C57BLKS/J f 10.6 2.51   8 0.888 0.236 6.7, 14.0 1.88
C57BLKS/J m 8.04 1.83   8 0.647 0.228 6.1, 10.9 0.68
C57BR/cdJ f 9.25 2.24   8 0.792 0.242 6.64, 14.1 1.35
C57BR/cdJ m 11.4 1.1   8 0.388 0.096 9.44, 12.6 1.96
C57L/J f 5.07 1.38   8 0.488 0.272 3.2, 7.79 -0.29
C57L/J m 7.43 1.92   8 0.677 0.258 3.23, 9.84 0.45
CAST/EiJ f 8.71 2.8   8 0.989 0.321 5.21, 13.9 1.13
CAST/EiJ m 8.79 3.55   6 1.45 0.404 4.55, 13.1 0.96
CBA/J f 3.64 1.48   8 0.524 0.407 1.62, 5.71 -0.85
CBA/J m 3.91 1.2   7 0.452 0.306 2.45, 5.68 -0.9
DBA/2J f 5.21 1.93   8 0.683 0.371 2.71, 8.19 -0.24
DBA/2J m 2.7 1.24   7 0.467 0.458 1.29, 4.97 -1.36
FVB/NJ f 3.82 0.621   8 0.219 0.163 3.15, 5.12 -0.78
FVB/NJ m 3.34 0.588   8 0.208 0.176 2.63, 4.26 -1.11
KK/HlJ f 4.64 0.908   7 0.343 0.196 3.33, 5.95 -0.46
KK/HlJ m 6.63 1.32   11 0.398 0.199 4.94, 8.62 0.14
LP/J f 9.18 2.48   8 0.876 0.27 6.27, 14.5 1.32
LP/J m 9.88 2.35   7 0.887 0.237 6.35, 13.7 1.38
MRL/MpJ f 2.76 1.05   8 0.372 0.382 1.81, 5.09 -1.2
MRL/MpJ m 3.42 0.933   8 0.33 0.273 1.73, 4.47 -1.08
NOD.B10Sn-H2b/J f 2.47 0.879   8 0.311 0.355 1.2, 3.4 -1.31
NOD.B10Sn-H2b/J m 3.6 0.397   8 0.14 0.11 3.13, 4.26 -1.01
NON/ShiLtJ f 4.29 0.802   9 0.267 0.187 3.19, 5.72 -0.6
NON/ShiLtJ m 4.33 1.09   7 0.413 0.252 2.26, 5.62 -0.73
NZO/HlLtJ f 6.01 2.26   6 0.924 0.377 2.82, 8.72 0.08
NZO/HlLtJ m 6.23 1.65   5 0.737 0.264 3.9, 8.1 -0.01
NZW/LacJ f 9.53 2.18   8 0.772 0.229 6.01, 12.8 1.46
NZW/LacJ m 8.62 1.1   8 0.387 0.127 6.38, 9.73 0.9
P/J f 3.98 0.807   7 0.305 0.203 2.57, 4.91 -0.72
P/J m 4.92 1.41   3 0.817 0.287 3.66, 6.45 -0.51
PL/J f 2.95 1.26   7 0.477 0.428 1.51, 5.5 -1.12
PL/J m 3.31 1.04   9 0.347 0.315 1.86, 5.0 -1.12
PWD/PhJ f 3.45 1.21   8 0.426 0.35 2.23, 6.25 -0.93
PWD/PhJ m 4.87 0.585   8 0.207 0.12 4.09, 5.6 -0.53
RIIIS/J f 4.35 0.491   8 0.173 0.113 3.48, 4.94 -0.57
RIIIS/J m 6.05 0.781   7 0.295 0.129 5.09, 7.46 -0.08
SJL/J f 5.31 3.97   7 1.5 0.749 1.45, 12.4 -0.2
SJL/J m 5.21 2.02   8 0.716 0.388 1.57, 7.86 -0.4
SM/J f 3.11 0.51   8 0.18 0.164 2.38, 3.78 -1.06
SM/J m 4.34 0.799   8 0.283 0.184 3.13, 5.02 -0.73
SWR/J f 10.1 4.0   7 1.51 0.395 4.63, 15.3 1.68
SWR/J m 5.15 1.2   8 0.424 0.233 3.12, 6.79 -0.42
WSB/EiJ f 4.4 0.557   9 0.186 0.127 3.36, 4.97 -0.55
WSB/EiJ m 5.34 1.08   8 0.382 0.202 3.4, 6.64 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.7287 0.6066 5.9213 3.5362
129S1/SvImJ m 3.71 0.6485 4.9849 2.4351
A/J f 4.0271 0.6485 5.302 2.7522
A/J m 3.4583 0.7004 4.8354 2.0813
BALB/cByJ f 4.8514 0.6485 6.1263 3.5765
BALB/cByJ m 7.6614 0.6485 8.9363 6.3865
BTBR T+ Itpr3tf/J f 8.0425 0.6066 9.2351 6.8499
BTBR T+ Itpr3tf/J m 9.495 0.6066 10.6876 8.3024
BUB/BnJ f 9.7 0.6485 10.9749 8.4251
BUB/BnJ m 9.9867 0.7004 11.3637 8.6096
C3H/HeJ f 4.0012 0.6066 5.1938 2.8087
C3H/HeJ m 4.925 0.6066 6.1176 3.7324
C57BL/10J f 8.4422 0.5719 9.5666 7.3179
C57BL/10J m 10.2925 0.6066 11.4851 9.0999
C57BL/6J f 7.8129 0.6485 9.0878 6.538
C57BL/6J m 10.7383 0.7004 12.1154 9.3613
C57BLKS/J f 10.6388 0.6066 11.8313 9.4462
C57BLKS/J m 8.0375 0.6066 9.2301 6.8449
C57BR/cdJ f 9.25 0.6066 10.4426 8.0574
C57BR/cdJ m 11.4175 0.6066 12.6101 10.2249
C57L/J f 5.0738 0.6066 6.2663 3.8812
C57L/J m 7.4338 0.6066 8.6263 6.2412
CAST/EiJ f 8.7112 0.6066 9.9038 7.5187
CAST/EiJ m 8.7883 0.7004 10.1654 7.4113
CBA/J f 3.6425 0.6066 4.8351 2.4499
CBA/J m 3.9143 0.6485 5.1892 2.6394
DBA/2J f 5.215 0.6066 6.4076 4.0224
DBA/2J m 2.6971 0.6485 3.972 1.4222
FVB/NJ f 3.8175 0.6066 5.0101 2.6249
FVB/NJ m 3.34 0.6066 4.5326 2.1474
KK/HlJ f 4.6414 0.6485 5.9163 3.3665
KK/HlJ m 6.6273 0.5173 7.6443 5.6102
LP/J f 9.1788 0.6066 10.3713 7.9862
LP/J m 9.8829 0.6485 11.1578 8.608
MRL/MpJ f 2.7563 0.6066 3.9488 1.5637
MRL/MpJ m 3.4187 0.6066 4.6113 2.2262
NOD.B10Sn-H2b/J f 2.4725 0.6066 3.6651 1.2799
NOD.B10Sn-H2b/J m 3.5962 0.6066 4.7888 2.4037
NON/ShiLtJ f 4.2922 0.5719 5.4166 3.1679
NON/ShiLtJ m 4.3343 0.6485 5.6092 3.0594
NZO/HlLtJ f 6.0117 0.7004 7.3887 4.6346
NZO/HlLtJ m 6.234 0.7673 7.7425 4.7255
NZW/LacJ f 9.525 0.6066 10.7176 8.3324
NZW/LacJ m 8.6163 0.6066 9.8088 7.4237
P/J f 3.9771 0.6485 5.252 2.7022
P/J m 4.92 0.9906 6.8675 2.9725
PL/J f 2.9529 0.6485 4.2278 1.678
PL/J m 3.3078 0.5719 4.4321 2.1834
PWD/PhJ f 3.4463 0.6066 4.6388 2.2537
PWD/PhJ m 4.8725 0.6066 6.0651 3.6799
RIIIS/J f 4.35 0.6066 5.5426 3.1574
RIIIS/J m 6.0457 0.6485 7.3206 4.7708
SJL/J f 5.3057 0.6485 6.5806 4.0308
SJL/J m 5.2137 0.6066 6.4063 4.0212
SM/J f 3.1062 0.6066 4.2988 1.9137
SM/J m 4.3412 0.6066 5.5338 3.1487
SWR/J f 10.1414 0.6485 11.4163 8.8665
SWR/J m 5.15 0.6066 6.3426 3.9574
WSB/EiJ f 4.3989 0.5719 5.5233 3.2745
WSB/EiJ m 5.345 0.6066 6.5376 4.1524


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 4.2194 0.444 5.0922 3.3465
A/J both 3.7427 0.4773 4.681 2.8044
BALB/cByJ both 6.2564 0.4585 7.1579 5.3549
BTBR T+ Itpr3tf/J both 8.7687 0.4289 9.612 7.9255
BUB/BnJ both 9.8433 0.4773 10.7816 8.905
C3H/HeJ both 4.4631 0.4289 5.3064 3.6199
C57BL/10J both 9.3674 0.4168 10.1869 8.5478
C57BL/6J both 9.2756 0.4773 10.2139 8.3373
C57BLKS/J both 9.3381 0.4289 10.1814 8.4949
C57BR/cdJ both 10.3337 0.4289 11.177 9.4905
C57L/J both 6.2538 0.4289 7.097 5.4105
CAST/EiJ both 8.7498 0.4633 9.6606 7.839
CBA/J both 3.7784 0.444 4.6513 2.9055
DBA/2J both 3.9561 0.444 4.8289 3.0832
FVB/NJ both 3.5787 0.4289 4.422 2.7355
KK/HlJ both 5.6344 0.4148 6.4498 4.8189
LP/J both 9.5308 0.444 10.4037 8.6579
MRL/MpJ both 3.0875 0.4289 3.9308 2.2442
NOD.B10Sn-H2b/J both 3.0344 0.4289 3.8776 2.1911
NON/ShiLtJ both 4.3133 0.4323 5.1632 3.4633
NZO/HlLtJ both 6.1228 0.5195 7.1441 5.1016
NZW/LacJ both 9.0706 0.4289 9.9139 8.2274
P/J both 4.4486 0.592 5.6124 3.2847
PL/J both 3.1303 0.4323 3.9803 2.2804
PWD/PhJ both 4.1594 0.4289 5.0026 3.3161
RIIIS/J both 5.1979 0.444 6.0707 4.325
SJL/J both 5.2597 0.444 6.1326 4.3869
SM/J both 3.7237 0.4289 4.567 2.8805
SWR/J both 7.6457 0.444 8.5186 6.7728
WSB/EiJ both 4.8719 0.4168 5.6915 4.0524




  GWAS USING LINEAR MIXED MODELS