Project measure / variable:   Peters4   NEUT_M24

ID, description, units MPD:24312   NEUT_M24   neutrophil count (NEUT; units per volume x 103)   [n/µL]  at age 24mo  
Data set, strains Peters4   inbred   13 strains     sex: both     age: 104wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - neutrophil count (NEUT; units per volume x 103) at age 24mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains12 strains
Mean of the strain means2.61   n/µL 4.10   n/µL
Median of the strain means2.39   n/µL 3.70   n/µL
SD of the strain means± 1.21 ± 1.62
Coefficient of variation (CV)0.464 0.395
Min–max range of strain means1.01   –   5.78   n/µL 2.34   –   7.62   n/µL
Mean sample size per strain6.6   mice 6.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 70.4399 70.4399 21.472 < 0.0001
strain 9 197.839 21.9821 6.7008 < 0.0001
sex:strain 9 67.4266 7.4918 2.2837 0.0212
Residuals 119 390.3845 3.2805


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.39 1.06   8 0.375 0.443 1.28, 4.3 -0.18
129S1/SvImJ m 3.61 1.41   12 0.407 0.39 1.63, 5.68 -0.3
A/J m 3.94 1.19   2   0.84 0.302 3.1, 4.78 -0.1
BALB/cByJ f 2.26 1.9   5 0.85 0.842 1.03, 5.53 -0.29
C57BL/10J f 1.01 0.216   7 0.0815 0.214 0.61, 1.31 -1.32
C57BL/10J m 2.34 0.806   8 0.285 0.345 1.36, 3.42 -1.09
C57BL/6J f 3.26 2.16   6 0.882 0.662 1.99, 7.54 0.53
C57BL/6J m 5.51 1.06   7 0.401 0.192 4.44, 6.99 0.87
C57BLKS/J f 2.62 1.35   6 0.553 0.517 1.31, 5.16 0.01
C57BLKS/J m 2.4 1.4   7 0.528 0.582 1.41, 5.46 -1.05
C57BR/cdJ f 2.84 0.902   7 0.341 0.318 1.71, 3.87 0.19
C57BR/cdJ m 3.79 1.23   6 0.502 0.325 1.59, 5.39 -0.19
LP/J f 2.63 1.21   7 0.456 0.459 1.79, 5.22 0.01
LP/J m 7.62 2.34   5 1.05 0.307 4.24, 9.78 2.17
NON/ShiLtJ f 5.78 1.83   7 0.693 0.317 2.22, 7.99 2.61
NON/ShiLtJ m 5.66 2.88   6 1.17 0.508 1.87, 8.72 0.96
NZW/LacJ f 2.24 2.16   6 0.883 0.967 0.7, 6.46 -0.31
NZW/LacJ m 3.41 2.76   7 1.04 0.809 1.24, 9.02 -0.43
PWD/PhJ f 1.53 0.347   6 0.142 0.228 1.08, 1.99 -0.89
PWD/PhJ m 2.87 1.1   7 0.416 0.383 1.75, 4.38 -0.76
SM/J m 2.67 1.04   7 0.394 0.39 1.27, 4.47 -0.88
WSB/EiJ f 2.19 0.707   7 0.267 0.324 1.14, 3.12 -0.35
WSB/EiJ m 5.41 4.48   7 1.69 0.828 1.15, 15.0 0.81


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.3937 0.6404 3.6617 1.1258
129S1/SvImJ m 3.6092 0.5229 4.6445 2.5739
C57BL/10J f 1.0086 0.6846 2.3641 0.0
C57BL/10J m 2.3388 0.6404 3.6067 1.0708
C57BL/6J f 3.2633 0.7394 4.7275 1.7992
C57BL/6J m 5.5071 0.6846 6.8627 4.1516
C57BLKS/J f 2.6217 0.7394 4.0858 1.1575
C57BLKS/J m 2.4 0.6846 3.7555 1.0445
C57BR/cdJ f 2.84 0.6846 4.1955 1.4845
C57BR/cdJ m 3.7867 0.7394 5.2508 2.3225
LP/J f 2.6286 0.6846 3.9841 1.273
LP/J m 7.616 0.81 9.2199 6.0121
NON/ShiLtJ f 5.78 0.6846 7.1355 4.4245
NON/ShiLtJ m 5.6617 0.7394 7.1258 4.1975
NZW/LacJ f 2.2383 0.7394 3.7025 0.7742
NZW/LacJ m 3.4129 0.6846 4.7684 2.0573
PWD/PhJ f 1.525 0.7394 2.9891 0.0609
PWD/PhJ m 2.8729 0.6846 4.2284 1.5173
WSB/EiJ f 2.1857 0.6846 3.5412 0.8302
WSB/EiJ m 5.41 0.6846 6.7655 4.0545


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.0015 0.4134 3.8199 2.183
C57BL/10J both 1.6737 0.4687 2.6017 0.7456
C57BL/6J both 4.3852 0.5038 5.3829 3.3876
C57BLKS/J both 2.5108 0.5038 3.5085 1.5132
C57BR/cdJ both 3.3133 0.5038 4.311 2.3157
LP/J both 5.1223 0.5303 6.1723 4.0723
NON/ShiLtJ both 5.7208 0.5038 6.7185 4.7232
NZW/LacJ both 2.8256 0.5038 3.8232 1.8279
PWD/PhJ both 2.1989 0.5038 3.1966 1.2013
WSB/EiJ both 3.7979 0.4841 4.7564 2.8393




  GWAS USING LINEAR MIXED MODELS