Project measure / variable:   Peters4   NEUT_M18

ID, description, units MPD:24311   NEUT_M18   neutrophil count (NEUT; units per volume x 103)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - neutrophil count (NEUT; units per volume x 103) at age 18mo

KK/HlJNON/ShiLtJLP/JDBA/2JMRL/MpJC3H/HeJNOD.B10Sn-H2<b>/JBTBR T<+> Itpr3<tf>/J129S1/SvImJFVB/NJWSB/EiJC57L/JPL/JA/JBALB/cByJBUB/BnJCBA/JNZO/HlLtJC57BLKS/JC57BL/10JSWR/JNZW/LacJP/JCAST/EiJC57BR/cdJPWD/PhJSM/JC57BL/6JRIIIS/JSJL/J n/µL x 103 0246810121416femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means1.77   n/µL 2.49   n/µL
Median of the strain means1.48   n/µL 2.35   n/µL
SD of the strain means± 0.916 ± 1.11
Coefficient of variation (CV)0.518 0.445
Min–max range of strain means0.831   –   5.03   n/µL 1.09   –   5.19   n/µL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 55.2312 55.2312 24.097 < 0.0001
strain 26 311.9318 11.9974 5.2344 < 0.0001
sex:strain 26 62.044 2.3863 1.0411 0.4119
Residuals 334 765.5394 2.292


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 57 (57)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 1.82 0.807   8 0.285 0.442 0.89, 3.18 0.06
129S1/SvImJ m 3.5 1.37   7 0.516 0.39 2.15, 6.43 0.91
A/J f 1.38 0.767   7 0.29 0.555 0.65, 2.63 -0.42
A/J m 2.45 1.93   15 0.497 0.786 1.01, 7.86 -0.03
BALB/cByJ f 1.47 0.398   8 0.141 0.271 0.94, 2.1 -0.33
BALB/cByJ m 2.35 0.532   7 0.201 0.227 1.67, 3.04 -0.12
BTBR T+ Itpr3tf/J f 1.73 0.387   8 0.137 0.223 1.07, 2.24 -0.04
BTBR T+ Itpr3tf/J m 3.59 1.04   6 0.423 0.289 2.32, 5.24 0.99
BUB/BnJ f 1.74 0.518   5 0.232 0.298 1.33, 2.33 -0.03
BUB/BnJ m 1.83 0.536   6 0.219 0.292 1.08, 2.75 -0.59
C3H/HeJ f 2.28 1.1   7 0.417 0.484 1.03, 4.54 0.56
C3H/HeJ m 3.43 1.11   8 0.392 0.323 1.39, 5.46 0.85
C57BL/10J f 1.35 0.806   7 0.305 0.598 0.51, 3.04 -0.46
C57BL/10J m 1.92 1.64   13 0.455 0.856 1.06, 7.13 -0.51
C57BL/6J f 0.966 0.3   7 0.113 0.31 0.6, 1.42 -0.88
C57BL/6J m 1.43 0.373   7 0.141 0.262 0.91, 1.84 -0.96
C57BLKS/J m 1.68 0.496   16 0.124 0.296 0.99, 2.59 -0.73
C57BR/cdJ f 1.48 0.406   8 0.143 0.273 0.71, 2.14 -0.31
C57BR/cdJ m 1.28 0.19   8 0.0671 0.148 1.02, 1.61 -1.09
C57L/J f 1.97 0.777   7 0.294 0.395 0.97, 3.17 0.22
C57L/J m 2.41 1.42   7 0.539 0.591 1.54, 5.11 -0.07
CAST/EiJ f 1.42 0.539   8 0.19 0.378 0.73, 2.13 -0.38
CBA/J f 1.25 0.134   2   0.095 0.108 1.15, 1.34 -0.57
CBA/J m 2.32 1.28   5 0.574 0.554 1.47, 4.59 -0.15
DBA/2J f 1.97 0.898   6 0.367 0.456 0.99, 3.17 0.22
DBA/2J m 4.28 2.17   6 0.887 0.508 2.47, 8.33 1.62
FVB/NJ f 1.16 0.529   7 0.2 0.457 0.6, 2.18 -0.66
FVB/NJ m 3.54 4.38   12 1.26 1.24 1.08, 16.2 0.95
KK/HlJ f 5.03 1.7   6 0.692 0.337 3.05, 7.54 3.56
KK/HlJ m 5.19 3.59   7 1.36 0.692 3.17, 13.3 2.44
LP/J m 3.32 1.1   8 0.39 0.332 1.26, 4.93 0.75
MRL/MpJ f 3.03 2.43   7 0.919 0.801 1.09, 8.33 1.38
MRL/MpJ m 2.7 0.683   8 0.241 0.253 1.57, 3.58 0.19
NOD.B10Sn-H2b/J f 2.92 2.46   7 0.928 0.84 1.27, 7.95 1.26
NOD.B10Sn-H2b/J m 2.4 0.771   7 0.291 0.321 0.97, 3.23 -0.08
NON/ShiLtJ f 3.65 1.7   5 0.76 0.466 2.15, 6.2 2.05
NON/ShiLtJ m 4.91 4.37   7 1.65 0.89 1.61, 12.8 2.19
NZO/HlLtJ f 1.47 0.258   10 0.0816 0.175 0.84, 1.79 -0.33
NZO/HlLtJ m 1.91 0.742   2   0.525 0.39 1.38, 2.43 -0.52
NZW/LacJ f 1.03 0.578   7 0.219 0.561 0.38, 2.1 -0.81
NZW/LacJ m 1.92 0.349   6 0.142 0.182 1.54, 2.43 -0.51
P/J f 0.831 0.239   7 0.0903 0.287 0.55, 1.15 -1.02
P/J m 2.03 1.17   5 0.523 0.577 0.85, 3.99 -0.41
PL/J f 1.65 0.525   8 0.186 0.318 0.59, 2.31 -0.13
PL/J m 2.5 1.68   8 0.594 0.671 0.94, 5.85 0.01
PWD/PhJ f 1.13 0.294   6 0.12 0.261 0.88, 1.69 -0.7
PWD/PhJ m 1.42 0.226   7 0.0855 0.159 1.16, 1.82 -0.96
RIIIS/J f 1.2 0.629   8 0.222 0.522 0.49, 2.32 -0.62
RIIIS/J m 1.17 0.236   8 0.0836 0.203 0.87, 1.59 -1.19
SJL/J f 1.07 0.366   7 0.139 0.342 0.68, 1.77 -0.76
SJL/J m 1.17 0.537   4 0.269 0.459 0.63, 1.87 -1.19
SM/J f 1.05 0.33   6 0.135 0.312 0.61, 1.44 -0.78
SM/J m 1.38 0.272   9 0.0906 0.197 1.0, 1.92 -1.0
SWR/J f 1.89 1.5   7 0.569 0.794 0.79, 5.08 0.13
SWR/J m 1.09 0.274   8 0.0968 0.251 0.6, 1.46 -1.26
WSB/EiJ f 1.58 0.474   8 0.168 0.3 1.0, 2.38 -0.21
WSB/EiJ m 3.04 1.38   9 0.46 0.453 1.69, 5.78 0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.8237 0.5353 2.8767 0.7708
129S1/SvImJ m 3.4986 0.5722 4.6242 2.373
A/J f 1.38 0.5722 2.5056 0.2544
A/J m 2.452 0.3909 3.2209 1.6831
BALB/cByJ f 1.4725 0.5353 2.5254 0.4196
BALB/cByJ m 2.3471 0.5722 3.4727 1.2215
BTBR T+ Itpr3tf/J f 1.7338 0.5353 2.7867 0.6808
BTBR T+ Itpr3tf/J m 3.5883 0.6181 4.8041 2.3725
BUB/BnJ f 1.738 0.6771 3.0698 0.4062
BUB/BnJ m 1.8317 0.6181 3.0475 0.6159
C3H/HeJ f 2.2771 0.5722 3.4027 1.1515
C3H/HeJ m 3.4287 0.5353 4.4817 2.3758
C57BL/10J f 1.3486 0.5722 2.4742 0.223
C57BL/10J m 1.9177 0.4199 2.7437 1.0917
C57BL/6J f 0.9657 0.5722 2.0913 0.0
C57BL/6J m 1.4271 0.5722 2.5527 0.3015
C57BR/cdJ f 1.485 0.5353 2.5379 0.4321
C57BR/cdJ m 1.2812 0.5353 2.3342 0.2283
C57L/J f 1.9686 0.5722 3.0942 0.843
C57L/J m 2.4114 0.5722 3.537 1.2858
CBA/J f 1.245 1.0705 3.3508 0.0
CBA/J m 2.316 0.6771 3.6478 0.9842
DBA/2J f 1.9683 0.6181 3.1841 0.7525
DBA/2J m 4.275 0.6181 5.4908 3.0592
FVB/NJ f 1.1586 0.5722 2.2842 0.033
FVB/NJ m 3.5442 0.437 4.4039 2.6845
KK/HlJ f 5.0333 0.6181 6.2491 3.8175
KK/HlJ m 5.1943 0.5722 6.3199 4.0687
MRL/MpJ f 3.0329 0.5722 4.1585 1.9073
MRL/MpJ m 2.7025 0.5353 3.7554 1.6496
NOD.B10Sn-H2b/J f 2.9243 0.5722 4.0499 1.7987
NOD.B10Sn-H2b/J m 2.4029 0.5722 3.5285 1.2773
NON/ShiLtJ f 3.648 0.6771 4.9798 2.3162
NON/ShiLtJ m 4.91 0.5722 6.0356 3.7844
NZO/HlLtJ f 1.473 0.4788 2.4147 0.5313
NZO/HlLtJ m 1.905 1.0705 4.0108 0.0
NZW/LacJ f 1.03 0.5722 2.1556 0.0
NZW/LacJ m 1.915 0.6181 3.1308 0.6992
P/J f 0.8314 0.5722 1.957 0.0
P/J m 2.026 0.6771 3.3578 0.6942
PL/J f 1.6488 0.5353 2.7017 0.5958
PL/J m 2.5025 0.5353 3.5554 1.4496
PWD/PhJ f 1.1267 0.6181 2.3425 0.0
PWD/PhJ m 1.4214 0.5722 2.547 0.2958
RIIIS/J f 1.205 0.5353 2.2579 0.1521
RIIIS/J m 1.1675 0.5353 2.2204 0.1146
SJL/J f 1.0714 0.5722 2.197 0.0
SJL/J m 1.17 0.757 2.659 0.0
SM/J f 1.055 0.6181 2.2708 0.0
SM/J m 1.3833 0.5046 2.376 0.3906
SWR/J f 1.8943 0.5722 3.0199 0.7687
SWR/J m 1.09 0.5353 2.1429 0.0371
WSB/EiJ f 1.58 0.5353 2.6329 0.5271
WSB/EiJ m 3.0444 0.5046 4.0371 2.0518


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.6612 0.3918 3.4318 1.8905
A/J both 1.916 0.3465 2.5976 1.2344
BALB/cByJ both 1.9098 0.3918 2.6805 1.1392
BTBR T+ Itpr3tf/J both 2.661 0.4088 3.4652 1.8569
BUB/BnJ both 1.7848 0.4584 2.6865 0.8832
C3H/HeJ both 2.8529 0.3918 3.6236 2.0823
C57BL/10J both 1.6331 0.3549 2.3312 0.9351
C57BL/6J both 1.1964 0.4046 1.9924 0.4005
C57BR/cdJ both 1.3831 0.3785 2.1276 0.6386
C57L/J both 2.19 0.4046 2.9859 1.3941
CBA/J both 1.7805 0.6333 3.0263 0.5347
DBA/2J both 3.1217 0.437 3.9814 2.262
FVB/NJ both 2.3514 0.36 3.0595 1.6432
KK/HlJ both 5.1138 0.4211 5.9422 4.2854
MRL/MpJ both 2.8677 0.3918 3.6383 2.097
NOD.B10Sn-H2b/J both 2.6636 0.4046 3.4595 1.8676
NON/ShiLtJ both 4.279 0.4432 5.1509 3.4071
NZO/HlLtJ both 1.689 0.5863 2.8424 0.5356
NZW/LacJ both 1.4725 0.4211 2.3009 0.6441
P/J both 1.4287 0.4432 2.3006 0.5568
PL/J both 2.0756 0.3785 2.8201 1.3311
PWD/PhJ both 1.274 0.4211 2.1025 0.4456
RIIIS/J both 1.1862 0.3785 1.9308 0.4417
SJL/J both 1.1207 0.4745 2.054 0.1874
SM/J both 1.2192 0.399 2.004 0.4344
SWR/J both 1.4921 0.3918 2.2628 0.7215
WSB/EiJ both 2.3122 0.3678 3.0358 1.5887




  GWAS USING LINEAR MIXED MODELS

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