Project measure / variable:   Peters4   NEUT_M12

ID, description, units MPD:24310   NEUT_M12   neutrophil count (NEUT; units per volume x 103)   [n/µL]  at age 12mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 52wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - neutrophil count (NEUT; units per volume x 103) at age 12mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means1.38   n/µL 2.14   n/µL
Median of the strain means1.25   n/µL 1.96   n/µL
SD of the strain means± 0.660 ± 1.06
Coefficient of variation (CV)0.479 0.498
Min–max range of strain means0.594   –   3.77   n/µL 0.759   –   6.20   n/µL
Mean sample size per strain7.8   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 57.4251 57.4251 47.1728 < 0.0001
strain 29 207.6119 7.159 5.8809 < 0.0001
sex:strain 29 89.7527 3.0949 2.5424 < 0.0001
Residuals 393 478.4123 1.2173


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.25 0.368   8 0.13 0.295 0.62, 1.9 -0.19
129S1/SvImJ m 2.02 1.57   7 0.593 0.778 0.83, 4.6 -0.11
A/J f 1.26 0.636   7 0.241 0.503 0.75, 2.58 -0.18
A/J m 2.09 1.73   6 0.708 0.828 0.89, 5.35 -0.05
BALB/cByJ f 1.29 0.435   7 0.164 0.338 0.77, 1.85 -0.13
BALB/cByJ m 1.86 0.322   7 0.122 0.174 1.43, 2.32 -0.26
BTBR T+ Itpr3tf/J f 1.31 0.227   8 0.0803 0.173 1.05, 1.72 -0.1
BTBR T+ Itpr3tf/J m 2.28 1.12   8 0.397 0.493 1.38, 4.9 0.13
BUB/BnJ f 1.49 0.302   7 0.114 0.203 1.05, 1.95 0.17
BUB/BnJ m 2.35 1.13   6 0.461 0.48 1.22, 3.86 0.2
C3H/HeJ f 1.9 0.751   8 0.266 0.394 1.22, 3.55 0.79
C3H/HeJ m 3.01 0.901   8 0.318 0.299 1.91, 4.2 0.82
C57BL/10J f 1.1 0.227   9 0.0755 0.206 0.76, 1.47 -0.42
C57BL/10J m 1.19 0.287   8 0.101 0.241 0.77, 1.74 -0.89
C57BL/6J f 1.1 0.271   7 0.102 0.245 0.81, 1.56 -0.42
C57BL/6J m 1.7 0.497   6 0.203 0.292 0.89, 2.27 -0.41
C57BLKS/J f 1.1 0.26   8 0.092 0.236 0.73, 1.5 -0.42
C57BLKS/J m 1.04 0.197   8 0.0697 0.19 0.82, 1.45 -1.03
C57BR/cdJ f 1.16 0.246   8 0.087 0.212 0.71, 1.49 -0.33
C57BR/cdJ m 1.17 0.337   8 0.119 0.289 0.89, 1.92 -0.91
C57L/J f 0.685 0.258   8 0.0913 0.377 0.4, 1.07 -1.05
C57L/J m 0.759 0.102   8 0.0361 0.135 0.67, 0.97 -1.3
CAST/EiJ f 0.929 0.377   8 0.133 0.406 0.5, 1.47 -0.68
CAST/EiJ m 0.907 0.442   6 0.18 0.487 0.56, 1.7 -1.16
CBA/J f 0.87 0.213   8 0.0753 0.245 0.46, 1.12 -0.77
CBA/J m 1.75 0.679   7 0.257 0.388 1.0, 2.87 -0.37
DBA/2J f 1.72 0.685   8 0.242 0.398 0.89, 2.8 0.52
DBA/2J m 2.15 1.9   7 0.719 0.883 0.92, 6.29 0.01
FVB/NJ f 0.756 0.204   8 0.0722 0.27 0.49, 1.05 -0.94
FVB/NJ m 2.45 1.58   8 0.557 0.643 0.9, 5.86 0.29
KK/HlJ f 3.77 2.85   7 1.08 0.757 1.69, 10.1 3.62
KK/HlJ m 3.56 1.41   11 0.425 0.396 1.97, 6.58 1.33
LP/J f 2.53 0.657   8 0.232 0.26 1.84, 3.66 1.74
LP/J m 2.68 0.831   7 0.314 0.311 1.75, 4.22 0.51
MRL/MpJ f 1.43 0.194   8 0.0687 0.136 1.18, 1.79 0.08
MRL/MpJ m 1.7 0.361   8 0.128 0.212 1.34, 2.29 -0.41
NOD.B10Sn-H2b/J f 1.54 0.366   8 0.129 0.237 1.13, 2.26 0.24
NOD.B10Sn-H2b/J m 2.06 0.362   8 0.128 0.176 1.5, 2.65 -0.08
NON/ShiLtJ f 2.5 0.638   9 0.213 0.255 1.7, 3.83 1.7
NON/ShiLtJ m 2.83 1.03   7 0.388 0.363 1.37, 4.14 0.65
NZO/HlLtJ f 1.61 0.375   6 0.153 0.233 1.19, 2.22 0.35
NZO/HlLtJ m 6.2 5.4   5 2.41 0.87 1.36, 13.1 3.81
NZW/LacJ f 1.37 0.244   8 0.0864 0.178 0.99, 1.72 -0.01
NZW/LacJ m 1.89 0.698   8 0.247 0.37 1.38, 3.51 -0.23
P/J f 0.881 0.193   7 0.0728 0.218 0.68, 1.24 -0.75
P/J m 3.72 4.08   3 2.36 1.1 1.24, 8.43 1.48
PL/J f 1.57 0.26   7 0.0982 0.166 1.07, 1.94 0.29
PL/J m 1.62 0.734   9 0.245 0.454 1.07, 3.43 -0.49
PWD/PhJ f 0.864 0.159   8 0.0562 0.184 0.71, 1.17 -0.78
PWD/PhJ m 1.63 0.276   8 0.0977 0.17 1.29, 2.07 -0.48
RIIIS/J f 0.594 0.17   8 0.0601 0.286 0.35, 0.86 -1.19
RIIIS/J m 1.29 0.997   7 0.377 0.776 0.79, 3.54 -0.8
SJL/J f 1.03 0.37   7 0.14 0.358 0.57, 1.68 -0.53
SJL/J m 2.9 2.17   8 0.767 0.748 1.1, 7.55 0.71
SM/J f 0.984 0.191   8 0.0675 0.194 0.64, 1.23 -0.6
SM/J m 1.42 0.349   8 0.123 0.245 1.09, 2.17 -0.68
SWR/J f 2.0 2.38   7 0.898 1.19 0.76, 7.34 0.94
SWR/J m 1.43 0.53   8 0.187 0.37 0.76, 2.53 -0.67
WSB/EiJ f 0.764 0.23   9 0.0766 0.301 0.42, 1.12 -0.93
WSB/EiJ m 2.54 2.37   8 0.836 0.929 1.13, 8.27 0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.2462 0.3901 2.0132 0.4793
129S1/SvImJ m 2.0186 0.417 2.8384 1.1987
A/J f 1.2643 0.417 2.0842 0.4444
A/J m 2.0933 0.4504 2.9789 1.2078
BALB/cByJ f 1.2886 0.417 2.1084 0.4687
BALB/cByJ m 1.8557 0.417 2.6756 1.0358
BTBR T+ Itpr3tf/J f 1.31 0.3901 2.0769 0.5431
BTBR T+ Itpr3tf/J m 2.2762 0.3901 3.0432 1.5093
BUB/BnJ f 1.4886 0.417 2.3084 0.6687
BUB/BnJ m 2.355 0.4504 3.2406 1.4694
C3H/HeJ f 1.905 0.3901 2.6719 1.1381
C3H/HeJ m 3.0087 0.3901 3.7757 2.2418
C57BL/10J f 1.0989 0.3678 1.8219 0.3758
C57BL/10J m 1.1925 0.3901 1.9594 0.4256
C57BL/6J f 1.1029 0.417 1.9227 0.283
C57BL/6J m 1.7033 0.4504 2.5889 0.8178
C57BLKS/J f 1.1025 0.3901 1.8694 0.3356
C57BLKS/J m 1.0387 0.3901 1.8057 0.2718
C57BR/cdJ f 1.1612 0.3901 1.9282 0.3943
C57BR/cdJ m 1.1662 0.3901 1.9332 0.3993
C57L/J f 0.685 0.3901 1.4519 0.0
C57L/J m 0.7588 0.3901 1.5257 0.0
CAST/EiJ f 0.9287 0.3901 1.6957 0.1618
CAST/EiJ m 0.9067 0.4504 1.7922 0.0211
CBA/J f 0.87 0.3901 1.6369 0.1031
CBA/J m 1.75 0.417 2.5699 0.9301
DBA/2J f 1.72 0.3901 2.4869 0.9531
DBA/2J m 2.1543 0.417 2.9742 1.3344
FVB/NJ f 0.7562 0.3901 1.5232 0.0
FVB/NJ m 2.45 0.3901 3.2169 1.6831
KK/HlJ f 3.7657 0.417 4.5856 2.9458
KK/HlJ m 3.5591 0.3327 4.2131 2.9051
LP/J f 2.525 0.3901 3.2919 1.7581
LP/J m 2.6757 0.417 3.4956 1.8558
MRL/MpJ f 1.4262 0.3901 2.1932 0.6593
MRL/MpJ m 1.7037 0.3901 2.4707 0.9368
NOD.B10Sn-H2b/J f 1.5412 0.3901 2.3082 0.7743
NOD.B10Sn-H2b/J m 2.0612 0.3901 2.8282 1.2943
NON/ShiLtJ f 2.5011 0.3678 3.2242 1.7781
NON/ShiLtJ m 2.8314 0.417 3.6513 2.0116
NZO/HlLtJ f 1.6083 0.4504 2.4939 0.7228
NZO/HlLtJ m 6.2 0.4934 7.1701 5.2299
NZW/LacJ f 1.3725 0.3901 2.1394 0.6056
NZW/LacJ m 1.885 0.3901 2.6519 1.1181
P/J f 0.8814 0.417 1.7013 0.0616
P/J m 3.7167 0.637 4.969 2.4643
PL/J f 1.5657 0.417 2.3856 0.7458
PL/J m 1.6156 0.3678 2.3386 0.8925
PWD/PhJ f 0.8637 0.3901 1.6307 0.0968
PWD/PhJ m 1.6275 0.3901 2.3944 0.8606
RIIIS/J f 0.5937 0.3901 1.3607 0.0
RIIIS/J m 1.2857 0.417 2.1056 0.4658
SJL/J f 1.0314 0.417 1.8513 0.2116
SJL/J m 2.9012 0.3901 3.6682 2.1343
SM/J f 0.9837 0.3901 1.7507 0.2168
SM/J m 1.4225 0.3901 2.1894 0.6556
SWR/J f 1.9986 0.417 2.8184 1.1787
SWR/J m 1.43 0.3901 2.1969 0.6631
WSB/EiJ f 0.7644 0.3678 1.4875 0.0414
WSB/EiJ m 2.545 0.3901 3.3119 1.7781


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.6324 0.2855 2.1937 1.0711
A/J both 1.6788 0.3069 2.2822 1.0754
BALB/cByJ both 1.5721 0.2949 2.1519 0.9924
BTBR T+ Itpr3tf/J both 1.7931 0.2758 2.3354 1.2508
BUB/BnJ both 1.9218 0.3069 2.5252 1.3184
C3H/HeJ both 2.4569 0.2758 2.9992 1.9146
C57BL/10J both 1.1457 0.2681 1.6727 0.6187
C57BL/6J both 1.4031 0.3069 2.0065 0.7997
C57BLKS/J both 1.0706 0.2758 1.6129 0.5283
C57BR/cdJ both 1.1637 0.2758 1.706 0.6215
C57L/J both 0.7219 0.2758 1.2642 0.1796
CAST/EiJ both 0.9177 0.2979 1.5034 0.332
CBA/J both 1.31 0.2855 1.8713 0.7487
DBA/2J both 1.9371 0.2855 2.4985 1.3758
FVB/NJ both 1.6031 0.2758 2.1454 1.0608
KK/HlJ both 3.6624 0.2667 4.1868 3.138
LP/J both 2.6004 0.2855 3.1617 2.039
MRL/MpJ both 1.565 0.2758 2.1073 1.0227
NOD.B10Sn-H2b/J both 1.8012 0.2758 2.3435 1.259
NON/ShiLtJ both 2.6663 0.278 3.2128 2.1197
NZO/HlLtJ both 3.9042 0.334 4.5609 3.2474
NZW/LacJ both 1.6287 0.2758 2.171 1.0865
P/J both 2.299 0.3807 3.0475 1.5506
PL/J both 1.5906 0.278 2.1372 1.0441
PWD/PhJ both 1.2456 0.2758 1.7879 0.7033
RIIIS/J both 0.9397 0.2855 1.5011 0.3784
SJL/J both 1.9663 0.2855 2.5277 1.405
SM/J both 1.2031 0.2758 1.7454 0.6608
SWR/J both 1.7143 0.2855 2.2756 1.153
WSB/EiJ both 1.6547 0.2681 2.1817 1.1277




  GWAS USING LINEAR MIXED MODELS