Project measure / variable:   Peters4   NEUT_M06

ID, description, units MPD:24309   NEUT_M06   neutrophil count (NEUT; units per volume x 103)   [n/µL]  at age 6mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 26wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - neutrophil count (NEUT; units per volume x 103) at age 6mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means1.10   n/µL 1.65   n/µL
Median of the strain means0.992   n/µL 1.39   n/µL
SD of the strain means± 0.451 ± 1.05
Coefficient of variation (CV)0.411 0.637
Min–max range of strain means0.494   –   2.22   n/µL 0.501   –   5.18   n/µL
Mean sample size per strain7.7   mice 7.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 35.4943 35.4943 43.9434 < 0.0001
strain 29 190.3631 6.5642 8.1268 < 0.0001
sex:strain 29 77.9022 2.6863 3.3257 < 0.0001
Residuals 393 317.4369 0.8077


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.05 0.128   8 0.0453 0.123 0.86, 1.21 -0.1
129S1/SvImJ m 1.0 0.167   12 0.0483 0.167 0.73, 1.35 -0.62
A/J f 0.844 0.147   5 0.0656 0.174 0.68, 0.98 -0.56
A/J m 0.879 0.192   8 0.0679 0.218 0.58, 1.14 -0.73
BALB/cByJ f 1.5 0.291   6 0.119 0.194 1.19, 1.95 0.9
BALB/cByJ m 1.85 0.78   8 0.276 0.422 1.05, 3.44 0.19
BTBR T+ Itpr3tf/J f 0.951 0.328   8 0.116 0.345 0.63, 1.34 -0.32
BTBR T+ Itpr3tf/J m 1.45 0.531   8 0.188 0.367 0.9, 2.6 -0.19
BUB/BnJ f 0.991 0.186   8 0.0659 0.188 0.74, 1.32 -0.23
BUB/BnJ m 1.45 0.226   7 0.0853 0.156 1.13, 1.74 -0.19
C3H/HeJ f 1.59 0.605   7 0.229 0.379 1.13, 2.87 1.09
C3H/HeJ m 1.71 0.23   8 0.0813 0.134 1.32, 1.97 0.05
C57BL/10J f 0.89 0.175   8 0.0618 0.196 0.53, 1.11 -0.46
C57BL/10J m 1.05 0.505   6 0.206 0.48 0.76, 2.07 -0.57
C57BL/6J f 0.516 0.208   8 0.0735 0.403 0.28, 0.87 -1.29
C57BL/6J m 1.49 0.609   6 0.249 0.41 0.9, 2.62 -0.15
C57BLKS/J f 0.854 0.218   8 0.077 0.255 0.55, 1.21 -0.54
C57BLKS/J m 1.06 0.428   7 0.162 0.402 0.53, 1.94 -0.56
C57BR/cdJ f 0.766 0.264   7 0.0999 0.345 0.46, 1.21 -0.73
C57BR/cdJ m 1.01 0.217   8 0.0766 0.215 0.77, 1.5 -0.61
C57L/J f 0.941 0.652   8 0.231 0.693 0.55, 2.52 -0.34
C57L/J m 0.501 0.0579   8 0.0205 0.116 0.41, 0.58 -1.09
CAST/EiJ f 1.01 0.434   10 0.137 0.431 0.49, 1.8 -0.19
CAST/EiJ m 0.82 0.24   2   0.17 0.293 0.65, 0.99 -0.79
CBA/J f 0.848 0.143   6 0.0583 0.168 0.73, 1.13 -0.55
CBA/J m 1.33 0.93   8 0.329 0.699 0.65, 3.41 -0.31
DBA/2J f 1.2 0.302   7 0.114 0.252 0.76, 1.74 0.23
DBA/2J m 3.0 2.24   7 0.848 0.748 1.46, 7.78 1.28
FVB/NJ f 0.568 0.116   8 0.041 0.204 0.45, 0.78 -1.17
FVB/NJ m 1.51 0.608   7 0.23 0.404 0.79, 2.43 -0.14
KK/HlJ f 1.56 0.407   6 0.166 0.262 1.17, 2.35 1.03
KK/HlJ m 3.68 3.09   8 1.09 0.84 1.66, 9.27 1.93
LP/J f 2.22 2.07   6 0.846 0.932 1.02, 6.41 2.49
LP/J m 3.85 4.02   8 1.42 1.04 1.59, 13.6 2.09
MRL/MpJ f 1.24 0.653   8 0.231 0.525 0.64, 2.76 0.32
MRL/MpJ m 1.17 0.255   5 0.114 0.218 0.87, 1.56 -0.46
NOD.B10Sn-H2b/J f 1.4 0.313   8 0.111 0.223 0.9, 1.83 0.67
NOD.B10Sn-H2b/J m 1.67 0.501   8 0.177 0.3 0.94, 2.26 0.02
NON/ShiLtJ f 1.88 0.935   8 0.331 0.498 0.91, 3.81 1.74
NON/ShiLtJ m 2.46 0.753   6 0.308 0.306 1.45, 3.31 0.77
NZO/HlLtJ f 2.1 0.34   8 0.12 0.162 1.66, 2.72 2.23
NZO/HlLtJ m 1.56 0.287   7 0.109 0.184 1.08, 1.85 -0.09
NZW/LacJ f 1.52 0.513   8 0.181 0.338 0.9, 2.37 0.94
NZW/LacJ m 5.18 1.85   6 0.755 0.357 1.8, 7.3 3.35
P/J f 0.494 0.149   8 0.0528 0.303 0.29, 0.76 -1.34
P/J m 1.54 0.863   8 0.305 0.559 0.83, 3.41 -0.11
PL/J f 1.1 0.394   13 0.109 0.359 0.71, 2.04 0.01
PL/J m 1.28 0.174   8 0.0615 0.136 1.01, 1.51 -0.35
PWD/PhJ f 0.992 0.169   8 0.0597 0.17 0.69, 1.24 -0.23
PWD/PhJ m 1.3 0.369   7 0.14 0.284 0.92, 1.88 -0.33
RIIIS/J f 0.535 0.0968   8 0.0342 0.181 0.36, 0.7 -1.25
RIIIS/J m 0.562 0.0919   8 0.0325 0.163 0.42, 0.69 -1.04
SJL/J f 0.809 0.206   8 0.0729 0.255 0.45, 1.06 -0.64
SJL/J m 2.34 0.985   8 0.348 0.421 0.71, 3.39 0.65
SM/J f 1.1 0.229   6 0.0936 0.209 0.87, 1.51 0.01
SM/J m 0.939 0.173   8 0.0612 0.184 0.73, 1.18 -0.68
SWR/J f 0.711 0.368   8 0.13 0.518 0.31, 1.3 -0.86
SWR/J m 0.644 0.169   8 0.0598 0.263 0.43, 0.94 -0.96
WSB/EiJ f 0.714 0.269   10 0.0852 0.377 0.36, 1.14 -0.85
WSB/EiJ m 1.28 0.354   7 0.134 0.277 0.69, 1.66 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0462 0.3178 1.671 0.4215
129S1/SvImJ m 1.0008 0.2594 1.5109 0.4908
A/J f 0.844 0.4019 1.6342 0.0538
A/J m 0.8787 0.3178 1.5035 0.254
BALB/cByJ f 1.5 0.3669 2.2213 0.7787
BALB/cByJ m 1.85 0.3178 2.4747 1.2253
BTBR T+ Itpr3tf/J f 0.9513 0.3178 1.576 0.3265
BTBR T+ Itpr3tf/J m 1.4487 0.3178 2.0735 0.824
BUB/BnJ f 0.9912 0.3178 1.616 0.3665
BUB/BnJ m 1.4486 0.3397 2.1164 0.7807
C3H/HeJ f 1.5943 0.3397 2.2621 0.9264
C3H/HeJ m 1.7112 0.3178 2.336 1.0865
C57BL/10J f 0.89 0.3178 1.5147 0.2653
C57BL/10J m 1.0517 0.3669 1.773 0.3303
C57BL/6J f 0.5162 0.3178 1.141 0.0
C57BL/6J m 1.485 0.3669 2.2063 0.7637
C57BLKS/J f 0.8538 0.3178 1.4785 0.229
C57BLKS/J m 1.0643 0.3397 1.7321 0.3964
C57BR/cdJ f 0.7657 0.3397 1.4336 0.0979
C57BR/cdJ m 1.01 0.3178 1.6347 0.3853
C57L/J f 0.9412 0.3178 1.566 0.3165
C57L/J m 0.5012 0.3178 1.126 0.0
CAST/EiJ f 1.007 0.2842 1.5658 0.4482
CAST/EiJ m 0.82 0.6355 2.0694 0.0
CBA/J f 0.8483 0.3669 1.5697 0.127
CBA/J m 1.3312 0.3178 1.956 0.7065
DBA/2J f 1.2014 0.3397 1.8693 0.5336
DBA/2J m 3.0 0.3397 3.6678 2.3322
FVB/NJ f 0.5675 0.3178 1.1922 0.0
FVB/NJ m 1.5057 0.3397 2.1736 0.8379
KK/HlJ f 1.5567 0.3669 2.278 0.8353
KK/HlJ m 3.6825 0.3178 4.3072 3.0578
LP/J f 2.2233 0.3669 2.9447 1.502
LP/J m 3.8525 0.3178 4.4772 3.2278
MRL/MpJ f 1.2438 0.3178 1.8685 0.619
MRL/MpJ m 1.17 0.4019 1.9602 0.3798
NOD.B10Sn-H2b/J f 1.4025 0.3178 2.0272 0.7778
NOD.B10Sn-H2b/J m 1.6737 0.3178 2.2985 1.049
NON/ShiLtJ f 1.8787 0.3178 2.5035 1.254
NON/ShiLtJ m 2.4617 0.3669 3.183 1.7403
NZO/HlLtJ f 2.1025 0.3178 2.7272 1.4778
NZO/HlLtJ m 1.5629 0.3397 2.2307 0.895
NZW/LacJ f 1.52 0.3178 2.1447 0.8953
NZW/LacJ m 5.1833 0.3669 5.9047 4.462
P/J f 0.4938 0.3178 1.1185 0.0
P/J m 1.5437 0.3178 2.1685 0.919
PL/J f 1.0969 0.2493 1.587 0.6069
PL/J m 1.2825 0.3178 1.9072 0.6578
PWD/PhJ f 0.9925 0.3178 1.6172 0.3678
PWD/PhJ m 1.3014 0.3397 1.9693 0.6336
RIIIS/J f 0.535 0.3178 1.1597 0.0
RIIIS/J m 0.5625 0.3178 1.1872 0.0
SJL/J f 0.8087 0.3178 1.4335 0.184
SJL/J m 2.34 0.3178 2.9647 1.7153
SM/J f 1.0967 0.3669 1.818 0.3753
SM/J m 0.9387 0.3178 1.5635 0.314
SWR/J f 0.7112 0.3178 1.336 0.0865
SWR/J m 0.6437 0.3178 1.2685 0.019
WSB/EiJ f 0.714 0.2842 1.2728 0.1552
WSB/EiJ m 1.2771 0.3397 1.945 0.6093


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.0235 0.2051 1.4268 0.6203
A/J both 0.8614 0.2562 1.365 0.3577
BALB/cByJ both 1.675 0.2427 2.1521 1.1979
BTBR T+ Itpr3tf/J both 1.2 0.2247 1.6417 0.7583
BUB/BnJ both 1.2199 0.2326 1.6771 0.7627
C3H/HeJ both 1.6528 0.2326 2.11 1.1955
C57BL/10J both 0.9708 0.2427 1.448 0.4937
C57BL/6J both 1.0006 0.2427 1.4778 0.5235
C57BLKS/J both 0.959 0.2326 1.4163 0.5018
C57BR/cdJ both 0.8879 0.2326 1.3451 0.4306
C57L/J both 0.7212 0.2247 1.163 0.2795
CAST/EiJ both 0.9135 0.3481 1.5978 0.2292
CBA/J both 1.0898 0.2427 1.5669 0.6127
DBA/2J both 2.1007 0.2402 2.5729 1.6285
FVB/NJ both 1.0366 0.2326 1.4938 0.5794
KK/HlJ both 2.6196 0.2427 3.0967 2.1425
LP/J both 3.0379 0.2427 3.515 2.5608
MRL/MpJ both 1.2069 0.2562 1.7105 0.7032
NOD.B10Sn-H2b/J both 1.5381 0.2247 1.9799 1.0964
NON/ShiLtJ both 2.1702 0.2427 2.6473 1.6931
NZO/HlLtJ both 1.8327 0.2326 2.2899 1.3754
NZW/LacJ both 3.3517 0.2427 3.8288 2.8745
P/J both 1.0187 0.2247 1.4605 0.577
PL/J both 1.1897 0.2019 1.5867 0.7927
PWD/PhJ both 1.147 0.2326 1.6042 0.6897
RIIIS/J both 0.5487 0.2247 0.9905 0.107
SJL/J both 1.5744 0.2247 2.0161 1.1326
SM/J both 1.0177 0.2427 1.4948 0.5406
SWR/J both 0.6775 0.2247 1.1192 0.2358
WSB/EiJ both 0.9956 0.2215 1.4309 0.5602




  GWAS USING LINEAR MIXED MODELS