Project measure / variable:   Peters4   RBC_M18

ID, description, units MPD:24307   RBC_M18   red blood cell count (RBC; per volume x 106)   [n/µL]  at age 18mo  
Data set, strains Peters4   inbred   30 strains     sex: both     age: 78wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters4 - red blood cell count (RBC; per volume x 106) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains29 strains
Mean of the strain means9.82   n/µL 9.89   n/µL
Median of the strain means9.85   n/µL 9.82   n/µL
SD of the strain means± 0.912 ± 0.855
Coefficient of variation (CV)0.0928 0.0864
Min–max range of strain means7.63   –   11.7   n/µL 8.36   –   11.5   n/µL
Mean sample size per strain7.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.5007 0.5007 0.8378 0.3607
strain 26 229.267 8.818 14.7543 < 0.0001
sex:strain 26 59.5878 2.2918 3.8347 < 0.0001
Residuals 333 199.0187 0.5977


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 10.9 0.566   8 0.2 0.052 9.71, 11.6 1.18
129S1/SvImJ m 11.2 0.281   7 0.106 0.0252 10.6, 11.5 1.53
A/J f 9.44 0.928   7 0.351 0.0983 8.56, 11.4 -0.42
A/J m 9.56 0.946   14 0.253 0.099 7.72, 12.0 -0.39
BALB/cByJ f 10.5 0.343   8 0.121 0.0327 9.93, 11.0 0.74
BALB/cByJ m 10.3 0.653   7 0.247 0.0632 9.64, 11.2 0.48
BTBR T+ Itpr3tf/J f 7.63 1.72   8 0.608 0.225 4.95, 9.62 -2.41
BTBR T+ Itpr3tf/J m 9.54 0.357   5 0.16 0.0374 9.12, 9.88 -0.41
BUB/BnJ f 9.84 0.222   5 0.0991 0.0225 9.46, 10.0 0.02
BUB/BnJ m 9.99 0.381   6 0.155 0.0381 9.58, 10.4 0.12
C3H/HeJ f 9.11 0.266   7 0.1 0.0291 8.74, 9.5 -0.78
C3H/HeJ m 8.84 0.727   8 0.257 0.0822 7.3, 9.44 -1.23
C57BL/10J f 10.2 1.09   6 0.444 0.106 8.84, 11.3 0.41
C57BL/10J m 10.2 0.428   13 0.119 0.042 9.29, 10.8 0.36
C57BL/6J f 10.5 0.219   7 0.0829 0.0209 10.3, 10.8 0.74
C57BL/6J m 10.1 0.303   7 0.115 0.0301 9.61, 10.6 0.24
C57BLKS/J m 10.3 0.31   16 0.0776 0.0302 9.77, 10.7 0.48
C57BR/cdJ f 10.2 0.943   8 0.333 0.0925 8.42, 11.9 0.41
C57BR/cdJ m 11.5 1.2   8 0.425 0.104 10.0, 13.8 1.88
C57L/J f 9.64 0.32   7 0.121 0.0332 9.36, 10.2 -0.2
C57L/J m 10.0 0.913   7 0.345 0.0911 8.54, 10.8 0.13
CAST/EiJ f 11.7 0.707   8 0.25 0.0606 10.9, 13.2 2.06
CBA/J f 9.04 0.573   2   0.405 0.0633 8.64, 9.45 -0.86
CBA/J m 9.26 0.537   5 0.24 0.058 8.49, 10.0 -0.74
DBA/2J f 11.4 0.141   6 0.0577 0.0124 11.2, 11.6 1.73
DBA/2J m 11.1 0.749   6 0.306 0.0674 10.4, 12.5 1.41
FVB/NJ f 9.46 0.504   7 0.191 0.0534 8.97, 10.4 -0.4
FVB/NJ m 8.36 0.933   12 0.269 0.112 5.89, 9.36 -1.79
KK/HlJ f 9.95 0.625   6 0.255 0.0628 9.03, 10.5 0.14
KK/HlJ m 9.92 0.425   7 0.161 0.0428 9.36, 10.7 0.03
LP/J m 10.6 0.438   8 0.155 0.0414 9.89, 11.4 0.83
MRL/MpJ f 8.85 1.21   7 0.457 0.137 6.9, 10.3 -1.07
MRL/MpJ m 9.82 1.12   8 0.396 0.114 7.35, 10.7 -0.08
NOD.B10Sn-H2b/J f 8.35 0.906   7 0.343 0.109 7.04, 9.31 -1.62
NOD.B10Sn-H2b/J m 9.65 0.455   7 0.172 0.0471 8.92, 10.3 -0.28
NON/ShiLtJ f 9.38 1.11   5 0.495 0.118 7.84, 10.6 -0.49
NON/ShiLtJ m 8.86 1.16   7 0.439 0.131 7.23, 10.9 -1.21
NZO/HlLtJ f 9.98 0.489   10 0.155 0.049 9.21, 10.6 0.17
NZO/HlLtJ m 9.32 0.332   2   0.235 0.0356 9.09, 9.56 -0.67
NZW/LacJ f 8.25 0.337   7 0.127 0.0408 7.93, 8.98 -1.73
NZW/LacJ m 9.06 0.165   6 0.0673 0.0182 8.77, 9.26 -0.97
P/J f 10.6 0.784   7 0.297 0.0739 9.22, 11.5 0.85
P/J m 9.59 1.54   5 0.69 0.161 7.07, 11.3 -0.35
PL/J f 10.6 1.26   8 0.446 0.119 8.39, 11.9 0.85
PL/J m 9.64 1.4   9 0.467 0.145 7.04, 11.1 -0.29
PWD/PhJ f 10.5 0.326   6 0.133 0.0312 9.94, 10.8 0.74
PWD/PhJ m 11.5 0.506   7 0.191 0.0438 11.0, 12.5 1.88
RIIIS/J f 9.86 0.416   8 0.147 0.0421 9.44, 10.5 0.04
RIIIS/J m 10.4 0.285   8 0.101 0.0274 10.0, 10.9 0.6
SJL/J f 9.63 0.631   7 0.238 0.0655 8.47, 10.2 -0.21
SJL/J m 8.8 1.02   4 0.508 0.115 7.52, 9.99 -1.28
SM/J f 9.68 0.243   6 0.0991 0.0251 9.35, 9.87 -0.16
SM/J m 8.55 0.796   10 0.252 0.0931 6.82, 9.59 -1.57
SWR/J f 9.59 0.308   7 0.116 0.0321 9.23, 10.1 -0.26
SWR/J m 9.77 0.232   8 0.0822 0.0238 9.35, 10.0 -0.14
WSB/EiJ f 10.3 0.53   8 0.187 0.0516 9.56, 11.0 0.52
WSB/EiJ m 11.1 0.548   9 0.183 0.0495 10.6, 12.1 1.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 10.8888 0.2733 11.4264 10.3511
129S1/SvImJ m 11.1714 0.2922 11.7462 10.5966
A/J f 9.4429 0.2922 10.0176 8.8681
A/J m 9.5571 0.2066 9.9636 9.1507
BALB/cByJ f 10.5038 0.2733 11.0414 9.9661
BALB/cByJ m 10.3314 0.2922 10.9062 9.7566
BTBR T+ Itpr3tf/J f 7.63 0.2733 8.1677 7.0923
BTBR T+ Itpr3tf/J m 9.536 0.3457 10.2161 8.8559
BUB/BnJ f 9.836 0.3457 10.5161 9.1559
BUB/BnJ m 9.995 0.3156 10.6158 9.3742
C3H/HeJ f 9.1143 0.2922 9.6891 8.5395
C3H/HeJ m 8.8437 0.2733 9.3814 8.3061
C57BL/10J f 10.25 0.3156 10.8708 9.6292
C57BL/10J m 10.1854 0.2144 10.6072 9.7636
C57BL/6J f 10.5143 0.2922 11.0891 9.9395
C57BL/6J m 10.0557 0.2922 10.6305 9.4809
C57BR/cdJ f 10.1925 0.2733 10.7302 9.6548
C57BR/cdJ m 11.5375 0.2733 12.0752 10.9998
C57L/J f 9.6414 0.2922 10.2162 9.0666
C57L/J m 10.0157 0.2922 10.5905 9.4409
CBA/J f 9.045 0.5467 10.1203 7.9697
CBA/J m 9.264 0.3457 9.9441 8.5839
DBA/2J f 11.4 0.3156 12.0208 10.7792
DBA/2J m 11.1167 0.3156 11.7375 10.4958
FVB/NJ f 9.4557 0.2922 10.0305 8.8809
FVB/NJ m 8.3583 0.2232 8.7973 7.9193
KK/HlJ f 9.95 0.3156 10.5708 9.3292
KK/HlJ m 9.9157 0.2922 10.4905 9.3409
MRL/MpJ f 8.8486 0.2922 9.4234 8.2738
MRL/MpJ m 9.8175 0.2733 10.3552 9.2798
NOD.B10Sn-H2b/J f 8.3529 0.2922 8.9276 7.7781
NOD.B10Sn-H2b/J m 9.6471 0.2922 10.2219 9.0724
NON/ShiLtJ f 9.384 0.3457 10.0641 8.7039
NON/ShiLtJ m 8.8629 0.2922 9.4376 8.2881
NZO/HlLtJ f 9.976 0.2445 10.4569 9.4951
NZO/HlLtJ m 9.325 0.5467 10.4003 8.2497
NZW/LacJ f 8.2514 0.2922 8.8262 7.6766
NZW/LacJ m 9.0567 0.3156 9.6775 8.4358
P/J f 10.6171 0.2922 11.1919 10.0424
P/J m 9.586 0.3457 10.2661 8.9059
PL/J f 10.6313 0.2733 11.1689 10.0936
PL/J m 9.6411 0.2577 10.148 9.1342
PWD/PhJ f 10.4567 0.3156 11.0775 9.8358
PWD/PhJ m 11.5429 0.2922 12.1176 10.9681
RIIIS/J f 9.86 0.2733 10.3977 9.3223
RIIIS/J m 10.4125 0.2733 10.9502 9.8748
SJL/J f 9.63 0.2922 10.2048 9.0552
SJL/J m 8.8 0.3865 9.5604 8.0396
SM/J f 9.6767 0.3156 10.2975 9.0558
SM/J m 8.555 0.2445 9.0359 8.0741
SWR/J f 9.5943 0.2922 10.1691 9.0195
SWR/J m 9.7725 0.2733 10.3102 9.2348
WSB/EiJ f 10.2663 0.2733 10.8039 9.7286
WSB/EiJ m 11.0667 0.2577 11.5736 10.5598


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 11.0301 0.2001 11.4236 10.6366
A/J both 9.5 0.1789 9.852 9.148
BALB/cByJ both 10.4176 0.2001 10.8111 10.0241
BTBR T+ Itpr3tf/J both 8.583 0.2204 9.0165 8.1495
BUB/BnJ both 9.9155 0.2341 10.3759 9.4551
C3H/HeJ both 8.979 0.2001 9.3725 8.5855
C57BL/10J both 10.2177 0.1908 10.593 9.8424
C57BL/6J both 10.285 0.2066 10.6914 9.8786
C57BR/cdJ both 10.865 0.1933 11.2452 10.4848
C57L/J both 9.8286 0.2066 10.235 9.4221
CBA/J both 9.1545 0.3234 9.7907 8.5183
DBA/2J both 11.2583 0.2232 11.6973 10.8193
FVB/NJ both 8.907 0.1838 9.2687 8.5454
KK/HlJ both 9.9329 0.2151 10.3559 9.5098
MRL/MpJ both 9.333 0.2001 9.7266 8.9395
NOD.B10Sn-H2b/J both 9.0 0.2066 9.4064 8.5936
NON/ShiLtJ both 9.1234 0.2263 9.5687 8.6782
NZO/HlLtJ both 9.6505 0.2994 10.2395 9.0615
NZW/LacJ both 8.654 0.2151 9.0771 8.231
P/J both 10.1016 0.2263 10.5468 9.6563
PL/J both 10.1362 0.1878 10.5057 9.7667
PWD/PhJ both 10.9998 0.2151 11.4228 10.5767
RIIIS/J both 10.1363 0.1933 10.5164 9.7561
SJL/J both 9.215 0.2423 9.6916 8.7384
SM/J both 9.1158 0.1996 9.5085 8.7232
SWR/J both 9.6834 0.2001 10.0769 9.2899
WSB/EiJ both 10.6665 0.1878 11.0359 10.297




  GWAS USING LINEAR MIXED MODELS